BLASTX nr result

ID: Glycyrrhiza24_contig00006436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006436
         (1250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK45016.1| unknown [Lotus japonicus]                              249   3e-69
ref|XP_003621750.1| 60S acidic ribosomal protein P0 [Medicago tr...   248   2e-68
ref|XP_003519385.1| PREDICTED: 60S acidic ribosomal protein P0-l...   244   2e-66
ref|NP_001236064.1| uncharacterized protein LOC100305996 [Glycin...   241   9e-66
ref|XP_003626217.1| 60S acidic ribosomal protein P0 [Medicago tr...   200   2e-51

>gb|AFK45016.1| unknown [Lotus japonicus]
          Length = 187

 Score =  249 bits (637), Expect(2) = 3e-69
 Identities = 123/140 (87%), Positives = 132/140 (94%)
 Frame = +1

Query: 355 MAGKVSKAAYDAKMLKLLREYSQVLVVSSDNVGSNQLQGIRRALHADSVVVMGKNSLMKR 534
           MAGKVSKAAYDAKM KLLREYSQVLVVS+DNVGSNQLQGIRRALH DSVVVMGKN+LMKR
Sbjct: 1   MAGKVSKAAYDAKMWKLLREYSQVLVVSADNVGSNQLQGIRRALHGDSVVVMGKNTLMKR 60

Query: 535 SITQAAQKTGNNAFLNLVPLLVGNVALVFTKGDLREVSEKVGKYKVVNPILMCPKYMSYD 714
           SI   A+KTGN AFLNLVPLLVGNVAL+FTKGDLREVSE++ KYKVV+PILMCPKYM+YD
Sbjct: 61  SIIDDAEKTGNKAFLNLVPLLVGNVALIFTKGDLREVSEQIAKYKVVDPILMCPKYMTYD 120

Query: 715 SYHTCSYMQSGQLPLGLTCC 774
           SY TCSY+QSGQLPLGLTCC
Sbjct: 121 SYRTCSYLQSGQLPLGLTCC 140



 Score = 40.0 bits (92), Expect(2) = 3e-69
 Identities = 18/19 (94%), Positives = 18/19 (94%)
 Frame = +2

Query: 872 RQFLTTSIWAPFLLLAGNL 928
           RQFL TSIWAPFLLLAGNL
Sbjct: 169 RQFLMTSIWAPFLLLAGNL 187


>ref|XP_003621750.1| 60S acidic ribosomal protein P0 [Medicago truncatula]
           gi|355496765|gb|AES77968.1| 60S acidic ribosomal protein
           P0 [Medicago truncatula]
          Length = 188

 Score =  248 bits (634), Expect(2) = 2e-68
 Identities = 126/141 (89%), Positives = 134/141 (95%), Gaps = 1/141 (0%)
 Frame = +1

Query: 355 MAGKVSKAAYDAKMLKLLREYSQVLVVSSDNVGSNQLQGIRRALHADSVVVMGKNSLMKR 534
           MAGKV+KAAYDAKM KLLREY+QVLVVSSDNVGSNQLQGIRRALH DSVVVMGKNSLMKR
Sbjct: 1   MAGKVAKAAYDAKMGKLLREYTQVLVVSSDNVGSNQLQGIRRALHEDSVVVMGKNSLMKR 60

Query: 535 SITQAAQKTGNN-AFLNLVPLLVGNVALVFTKGDLREVSEKVGKYKVVNPILMCPKYMSY 711
           SI QAA+KTGN+ AFLNLVPLLVGNVAL+FTKGDLR+VSE++ K KVVNPILMCPKYMSY
Sbjct: 61  SIIQAAEKTGNSHAFLNLVPLLVGNVALIFTKGDLRDVSERIAKLKVVNPILMCPKYMSY 120

Query: 712 DSYHTCSYMQSGQLPLGLTCC 774
           DSY TCSYMQSGQLPLGLTCC
Sbjct: 121 DSYKTCSYMQSGQLPLGLTCC 141



 Score = 38.9 bits (89), Expect(2) = 2e-68
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +2

Query: 872 RQFLTTSIWAPFLLLAGNL 928
           RQFL TSIW+PFLLLAGNL
Sbjct: 170 RQFLLTSIWSPFLLLAGNL 188


>ref|XP_003519385.1| PREDICTED: 60S acidic ribosomal protein P0-like [Glycine max]
          Length = 187

 Score =  244 bits (622), Expect(2) = 2e-66
 Identities = 121/140 (86%), Positives = 130/140 (92%)
 Frame = +1

Query: 355 MAGKVSKAAYDAKMLKLLREYSQVLVVSSDNVGSNQLQGIRRALHADSVVVMGKNSLMKR 534
           MAGKV+KAAYDAKMLKLLREYSQVLVVSSDNVGSNQLQGIRR L+ADSVVVMGKNS+MKR
Sbjct: 1   MAGKVAKAAYDAKMLKLLREYSQVLVVSSDNVGSNQLQGIRRGLNADSVVVMGKNSMMKR 60

Query: 535 SITQAAQKTGNNAFLNLVPLLVGNVALVFTKGDLREVSEKVGKYKVVNPILMCPKYMSYD 714
           SI   A+KTGN AFLNLVPLLVGNVAL+FTKGDLREVSE++ KYKVV PILMCPKY SYD
Sbjct: 61  SIILDAKKTGNKAFLNLVPLLVGNVALIFTKGDLREVSEQIAKYKVVQPILMCPKYTSYD 120

Query: 715 SYHTCSYMQSGQLPLGLTCC 774
           +Y  C+YMQSGQLPLGLTCC
Sbjct: 121 TYQNCTYMQSGQLPLGLTCC 140



 Score = 36.6 bits (83), Expect(2) = 2e-66
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = +2

Query: 872 RQFLTTSIWAPFLLLAGNL 928
           RQFL TSIW+P LLLAGNL
Sbjct: 169 RQFLMTSIWSPLLLLAGNL 187


>ref|NP_001236064.1| uncharacterized protein LOC100305996 [Glycine max]
           gi|255627221|gb|ACU13955.1| unknown [Glycine max]
          Length = 187

 Score =  241 bits (616), Expect(2) = 9e-66
 Identities = 119/140 (85%), Positives = 130/140 (92%)
 Frame = +1

Query: 355 MAGKVSKAAYDAKMLKLLREYSQVLVVSSDNVGSNQLQGIRRALHADSVVVMGKNSLMKR 534
           MAGKV+KAAYDAKMLKLL+EYSQVLVVSSDNVGSNQLQGIRR L+ADSVVVMGK+S+MKR
Sbjct: 1   MAGKVAKAAYDAKMLKLLKEYSQVLVVSSDNVGSNQLQGIRRGLNADSVVVMGKSSMMKR 60

Query: 535 SITQAAQKTGNNAFLNLVPLLVGNVALVFTKGDLREVSEKVGKYKVVNPILMCPKYMSYD 714
           SI   AQKTGN AFLNLVPLLVGNVAL+FTKGDLREVSE++ KYKVV PILMCPKY SYD
Sbjct: 61  SIILDAQKTGNKAFLNLVPLLVGNVALIFTKGDLREVSEQIAKYKVVQPILMCPKYTSYD 120

Query: 715 SYHTCSYMQSGQLPLGLTCC 774
           +Y  C+YMQSGQ+PLGLTCC
Sbjct: 121 TYQNCTYMQSGQIPLGLTCC 140



 Score = 36.6 bits (83), Expect(2) = 9e-66
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = +2

Query: 872 RQFLTTSIWAPFLLLAGNL 928
           RQFL TSIW+P LLLAGNL
Sbjct: 169 RQFLMTSIWSPLLLLAGNL 187


>ref|XP_003626217.1| 60S acidic ribosomal protein P0 [Medicago truncatula]
           gi|355501232|gb|AES82435.1| 60S acidic ribosomal protein
           P0 [Medicago truncatula]
          Length = 203

 Score =  200 bits (508), Expect(2) = 2e-51
 Identities = 108/141 (76%), Positives = 113/141 (80%), Gaps = 1/141 (0%)
 Frame = +1

Query: 355 MAGKVSKAAYDAKMLKLLREYSQVLVVSSDNVGSNQLQGIRRALHADSVVVMGKNSLMKR 534
           MAGKV+K+AY AKM KLLREY+QVLVVSSDNVGSNQLQGIRRALH DSVVVMGKNSLMK 
Sbjct: 1   MAGKVAKSAYYAKMAKLLREYTQVLVVSSDNVGSNQLQGIRRALHEDSVVVMGKNSLMKH 60

Query: 535 SITQAAQKTGNN-AFLNLVPLLVGNVALVFTKGDLREVSEKVGKYKVVNPILMCPKYMSY 711
           SI QAA+KTGNN AFLNL PLLVGN                    KVVNPILMCPKYMSY
Sbjct: 61  SINQAAEKTGNNDAFLNLGPLLVGNF------------------LKVVNPILMCPKYMSY 102

Query: 712 DSYHTCSYMQSGQLPLGLTCC 774
           DSY TCS+MQSGQLPLGLTCC
Sbjct: 103 DSYKTCSFMQSGQLPLGLTCC 123



 Score = 30.0 bits (66), Expect(2) = 2e-51
 Identities = 14/18 (77%), Positives = 15/18 (83%)
 Frame = +2

Query: 872 RQFLTTSIWAPFLLLAGN 925
           RQFL TSI +PFLLLA N
Sbjct: 152 RQFLLTSILSPFLLLAAN 169