BLASTX nr result

ID: Glycyrrhiza24_contig00006412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006412
         (1413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526265.1| PREDICTED: reticulon-like protein B17-like [...   517   e-144
ref|XP_003607499.1| Reticulon-like protein B18 [Medicago truncat...   457   e-126
gb|AFK47382.1| unknown [Medicago truncatula]                          448   e-123
ref|XP_003539539.1| PREDICTED: reticulon-like protein B17-like [...   417   e-114
ref|XP_003541899.1| PREDICTED: reticulon-like protein B17-like [...   412   e-112

>ref|XP_003526265.1| PREDICTED: reticulon-like protein B17-like [Glycine max]
          Length = 430

 Score =  517 bits (1331), Expect = e-144
 Identities = 278/412 (67%), Positives = 304/412 (73%), Gaps = 2/412 (0%)
 Frame = +2

Query: 32   RSSERSNRSKTPGLARIGENGTVEPLRISLDVVHSPSTKNAXXXXXXXXXXXXTNCXXXX 211
            R   RS    +  LAR  ENGTVEP++ISLD V SP    A            T+     
Sbjct: 12   RHHHRSRTKSSSRLARKSENGTVEPIQISLDTVTSPPPATAKPSAASP-----TSSLPIK 66

Query: 212  XXXXXXXXXXXXXKARFDEEVPEPAGVRRRCKSRGAQMGVLAXXXXXXXXXXXXXXXXXX 391
                         KARFDEEVPE AGVRRRCKSR A     A                  
Sbjct: 67   ELLLLSPSSARRSKARFDEEVPEAAGVRRRCKSRAAAAAQAASPRSLRRWRREE------ 120

Query: 392  XKETLNVDEVGKQRKRRHSGRPKKEKLPLVPFLPPPTSSP--KAEEENGGDLDRVGLLIT 565
             KE + V+EV KQRKRRHSGR +KE+L LVPF PP TSSP  KA+EEN GDLDRVG LI+
Sbjct: 121  -KEGVAVEEVVKQRKRRHSGRHRKERLSLVPFQPPSTSSPTTKADEENRGDLDRVGALIS 179

Query: 566  DLIMWKDVSKSTLWFAFGSLCFLSTCFTKGLNFSIFSATSQLAILLLAISFFSNSVCQRD 745
            DLIMWKDVSKSTLWF  G LCFLS+CFTKG+NFSIFSA S+LAILLL +SFFSNSVCQR+
Sbjct: 180  DLIMWKDVSKSTLWFGLGCLCFLSSCFTKGVNFSIFSAISRLAILLLGVSFFSNSVCQRN 239

Query: 746  QAEQRGYAKLKEDDILRLAKFILPAFNFAISKTRELFSGEPSMTLKVAPFLLLGAEYGHL 925
            Q E+R +AKLKEDDIL LAK ILPA NFAISKTRELFSGEP MTLKVAPFLLLGAEYGHL
Sbjct: 240  QVEKRSFAKLKEDDILHLAKLILPALNFAISKTRELFSGEPCMTLKVAPFLLLGAEYGHL 299

Query: 926  ITIWRLSAIGFFVSFSVPKLYSCYYTQINRRAECLKLRLLDTWSACSHKKIVVASALITF 1105
            ITIWRL AIGFFVSFSVP+LYSCY  QIN R ECLKLRLLDTWSAC+HKKIV+AS LI F
Sbjct: 300  ITIWRLCAIGFFVSFSVPRLYSCYSAQINLRVECLKLRLLDTWSACTHKKIVIASVLIAF 359

Query: 1106 WNLSTIKTRIFTAFLLLVILRYFRQNVTQQVEDGEAQVEDKEQRQALVVAEQ 1261
            WNLSTIKTRIFTAF+LLVILRYFR+ + Q VEDGEAQV +KEQ+QALVV  +
Sbjct: 360  WNLSTIKTRIFTAFILLVILRYFRETIMQPVEDGEAQVAEKEQKQALVVVAE 411


>ref|XP_003607499.1| Reticulon-like protein B18 [Medicago truncatula]
            gi|355508554|gb|AES89696.1| Reticulon-like protein B18
            [Medicago truncatula]
          Length = 390

 Score =  457 bits (1175), Expect = e-126
 Identities = 241/356 (67%), Positives = 267/356 (75%)
 Frame = +2

Query: 191  TNCXXXXXXXXXXXXXXXXXKARFDEEVPEPAGVRRRCKSRGAQMGVLAXXXXXXXXXXX 370
            TNC                 K RFDEE+ E  GVR+R  S+      L+           
Sbjct: 35   TNCLPLRELLLMSPPSTRKSKPRFDEELLESNGVRQRRCSKTRGTAALSSPRNSRRTRRC 94

Query: 371  XXXXXXXXKETLNVDEVGKQRKRRHSGRPKKEKLPLVPFLPPPTSSPKAEEENGGDLDRV 550
                    KE + VDEVGKQRKRRH    KK++L L                NGGDLDR+
Sbjct: 95   YEVEVREEKENVLVDEVGKQRKRRH----KKDRLSL----------------NGGDLDRI 134

Query: 551  GLLITDLIMWKDVSKSTLWFAFGSLCFLSTCFTKGLNFSIFSATSQLAILLLAISFFSNS 730
            G+LIT+LIMWKDV+KSTLWF FGSLCFLSTCFTKG+NFSIFSA SQLAIL+LA+SFFSNS
Sbjct: 135  GMLITELIMWKDVTKSTLWFGFGSLCFLSTCFTKGINFSIFSAISQLAILILAVSFFSNS 194

Query: 731  VCQRDQAEQRGYAKLKEDDILRLAKFILPAFNFAISKTRELFSGEPSMTLKVAPFLLLGA 910
            VCQR QA+ RGY KLK+DDILRLAK ILPA NFA SKT ELFSGEPSMTLKVAP LLLGA
Sbjct: 195  VCQRGQAKGRGYVKLKDDDILRLAKLILPALNFAFSKTTELFSGEPSMTLKVAPLLLLGA 254

Query: 911  EYGHLITIWRLSAIGFFVSFSVPKLYSCYYTQINRRAECLKLRLLDTWSACSHKKIVVAS 1090
            EYGHLITIWRLSAIGFFV+FSVPKLYSCY  QIN+R ECLKLRLLDTW+ACSHKKIVV S
Sbjct: 255  EYGHLITIWRLSAIGFFVNFSVPKLYSCYSAQINQRVECLKLRLLDTWNACSHKKIVVVS 314

Query: 1091 ALITFWNLSTIKTRIFTAFLLLVILRYFRQNVTQQVEDGEAQVEDKEQRQALVVAE 1258
            AL+TFWNLSTI+TRI TAFLL+V+L+YF+QNVTQQVEDGEAQ  DKE RQAL+VAE
Sbjct: 315  ALVTFWNLSTIRTRICTAFLLIVLLKYFQQNVTQQVEDGEAQAADKEHRQALLVAE 370


>gb|AFK47382.1| unknown [Medicago truncatula]
          Length = 364

 Score =  448 bits (1153), Expect = e-123
 Identities = 233/334 (69%), Positives = 259/334 (77%), Gaps = 1/334 (0%)
 Frame = +2

Query: 191  TNCXXXXXXXXXXXXXXXXXKARFDEEVPEPAGVRRRCKSRGAQMGVLAXXXXXXXXXXX 370
            TNC                 K RFDEE+ E  GVR+R  S+      L+           
Sbjct: 35   TNCLPLRELLLMSPPSTRKSKPRFDEELLESNGVRQRRCSKTRGTAALSSPRNSRRTRRC 94

Query: 371  XXXXXXXXKETLNVDEVGKQRKRRHSGRPKKEKLPLVPFLPPP-TSSPKAEEENGGDLDR 547
                    KE + VDEVGKQRKRRH    KK++L LVPF PP  T SPKA EENGGDLDR
Sbjct: 95   YEVEVREEKENVLVDEVGKQRKRRH----KKDRLSLVPFQPPQETFSPKAGEENGGDLDR 150

Query: 548  VGLLITDLIMWKDVSKSTLWFAFGSLCFLSTCFTKGLNFSIFSATSQLAILLLAISFFSN 727
            +G+LIT+LIMWKDV+KSTLWF FGSLCFLSTCFTKG+NFSIFSA SQLAIL+LA+SFFSN
Sbjct: 151  IGMLITELIMWKDVTKSTLWFGFGSLCFLSTCFTKGINFSIFSAISQLAILILAVSFFSN 210

Query: 728  SVCQRDQAEQRGYAKLKEDDILRLAKFILPAFNFAISKTRELFSGEPSMTLKVAPFLLLG 907
            SVCQR QA+ RGY KLK+DDILRLAK ILPA NFA SKT ELFSGEPSMTLKVAP LLLG
Sbjct: 211  SVCQRGQAKGRGYVKLKDDDILRLAKLILPALNFAFSKTTELFSGEPSMTLKVAPLLLLG 270

Query: 908  AEYGHLITIWRLSAIGFFVSFSVPKLYSCYYTQINRRAECLKLRLLDTWSACSHKKIVVA 1087
            AEYGHLITIWRLSAIGFFV+FSVPKLYSCY  QIN+R ECLKLRLLDTW+ACSHK+IVV 
Sbjct: 271  AEYGHLITIWRLSAIGFFVNFSVPKLYSCYSAQINQRVECLKLRLLDTWNACSHKEIVVV 330

Query: 1088 SALITFWNLSTIKTRIFTAFLLLVILRYFRQNVT 1189
            SAL+TFWNLSTI+TRI TAFLL+V+L+YF+QNVT
Sbjct: 331  SALVTFWNLSTIRTRICTAFLLIVLLKYFQQNVT 364


>ref|XP_003539539.1| PREDICTED: reticulon-like protein B17-like [Glycine max]
          Length = 393

 Score =  417 bits (1073), Expect = e-114
 Identities = 221/348 (63%), Positives = 256/348 (73%), Gaps = 14/348 (4%)
 Frame = +2

Query: 269  EVPEPAGVRRRCKSRGAQMGVLAXXXXXXXXXXXXXXXXXXXKETLNVDEVGKQRKRRHS 448
            E P+ AGVRRRCK+R  Q    A                   K+++ ++EVGK RKRR +
Sbjct: 51   EFPDSAGVRRRCKTRAPQT---ASPRNPRKSRRRSELEIREEKDSIFLEEVGKPRKRRQT 107

Query: 449  GRPKKEKLPLVPFLPPPTSSPKAEEENGGDLDRVGLLITDLIMWKDVSKSTLWFAFGSLC 628
             R KKEK    P   P T SPK+EEENGGD DRVG +++DLIMWK+ SKST WF FGSLC
Sbjct: 108  ARTKKEKPNSAP---PSTPSPKSEEENGGDFDRVGQVVSDLIMWKNSSKSTFWFGFGSLC 164

Query: 629  FLSTCFTKGLNFSIFSATSQLAILLLAISFFSNSVCQRDQAEQRGYAKLKEDDILRLAKF 808
             +S+CFT+GLNFSIFSA SQL ILL  +SFFSNS+CQR++ E++   KLKEDDI RLAK 
Sbjct: 165  LVSSCFTQGLNFSIFSALSQLGILLSGVSFFSNSICQRNEVEEKREIKLKEDDISRLAKL 224

Query: 809  ILPAFNFAISKTRELFSGEPSMTLKVAPFLLLGAEYGHLITIWRLSAIGFFVSFSVPKLY 988
            ILPA NFA+S+ R LFSGEPSMTLKV PFLLLGAEYGHLITIWRL AIGF VSFSVPKLY
Sbjct: 225  ILPALNFALSRMRALFSGEPSMTLKVVPFLLLGAEYGHLITIWRLCAIGFLVSFSVPKLY 284

Query: 989  SCYYTQINRRAECLKLRLLDTWSACSHKKIVVASALITFWNLSTIKTRIFTAFLLLVILR 1168
            SCY  QIN+RAE LK  LLDTWSAC+ KK V+ASAL+ FWNLS+IKTRIFT F+LLV+ R
Sbjct: 285  SCYTAQINQRAEGLKSWLLDTWSACTRKKKVMASALMAFWNLSSIKTRIFTVFILLVLCR 344

Query: 1169 YFRQNVTQQVEDGEAQV--------------EDKEQRQALVVAEQGRQ 1270
            Y RQ+V  Q+EDGEAQV              E+KE +QALVV EQGRQ
Sbjct: 345  YLRQHVVLQLEDGEAQVGEKEQQKDLVMAELEEKEPQQALVVREQGRQ 392


>ref|XP_003541899.1| PREDICTED: reticulon-like protein B17-like [Glycine max]
          Length = 385

 Score =  412 bits (1059), Expect = e-112
 Identities = 222/348 (63%), Positives = 255/348 (73%), Gaps = 14/348 (4%)
 Frame = +2

Query: 269  EVPEPAGVRRRCKSRGAQMGVLAXXXXXXXXXXXXXXXXXXXKETLNVDEVGKQRKRRHS 448
            E+P+ AGVRRRCK+R  Q    A                   K++  V+EVGK R RR +
Sbjct: 43   ELPDSAGVRRRCKTRAPQT---ASPRNPRKSRRRSELEIREEKDSTFVEEVGKPRTRRQT 99

Query: 449  GRPKKEKLPLVPFLPPPTSSPKAEEENGGDLDRVGLLITDLIMWKDVSKSTLWFAFGSLC 628
             R KKEK   VP   P T SPK+EEENGGDLD VG +++DLIMWKD SKST WF F SLC
Sbjct: 100  ARTKKEKPNSVP---PSTPSPKSEEENGGDLDHVGQVVSDLIMWKDASKSTFWFGFCSLC 156

Query: 629  FLSTCFTKGLNFSIFSATSQLAILLLAISFFSNSVCQRDQAEQRGYAKLKEDDILRLAKF 808
             LS+CFT+GLNFS+FSA SQL ILL  +SFFSNS+CQR++ E++   KL EDDILRLAK 
Sbjct: 157  LLSSCFTQGLNFSVFSALSQLGILLSGVSFFSNSICQRNEVEEKREIKLTEDDILRLAKL 216

Query: 809  ILPAFNFAISKTRELFSGEPSMTLKVAPFLLLGAEYGHLITIWRLSAIGFFVSFSVPKLY 988
            ILPA NFAIS+ R LFSGEPSMTLKV PFLLLGAEYGHLITI RL AIGF VSFSVPKLY
Sbjct: 217  ILPALNFAISRMRALFSGEPSMTLKVVPFLLLGAEYGHLITIRRLCAIGFVVSFSVPKLY 276

Query: 989  SCYYTQINRRAECLKLRLLDTWSACSHKKIVVASALITFWNLSTIKTRIFTAFLLLVILR 1168
            S Y  QIN+RAE LK  LLDTWSAC+HKK V+ASAL+TFWNLS+IKTRIFT F+LLV+ R
Sbjct: 277  SSYTVQINQRAEGLKSWLLDTWSACTHKKKVMASALMTFWNLSSIKTRIFTVFILLVLFR 336

Query: 1169 YFRQNVTQQVEDGEAQV--------------EDKEQRQALVVAEQGRQ 1270
            Y RQ+V  Q+EDGEA+V              E+KE +QALVV EQGRQ
Sbjct: 337  YLRQHVVLQLEDGEAKVGEKEQQKDSAMAEPEEKEPQQALVVKEQGRQ 384


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