BLASTX nr result

ID: Glycyrrhiza24_contig00006393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006393
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554837.1| PREDICTED: katanin p80 WD40 repeat-containin...   215   3e-54
ref|XP_003525689.1| PREDICTED: katanin p80 WD40 repeat-containin...   213   1e-53
ref|XP_002311885.1| predicted protein [Populus trichocarpa] gi|2...   209   2e-52
ref|XP_002316424.1| predicted protein [Populus trichocarpa] gi|2...   209   2e-52
ref|XP_002268907.2| PREDICTED: katanin p80 WD40 repeat-containin...   208   4e-52

>ref|XP_003554837.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
           1-like [Glycine max]
          Length = 758

 Score =  215 bits (548), Expect = 3e-54
 Identities = 108/109 (99%), Positives = 108/109 (99%)
 Frame = -3

Query: 329 MTTKRAYKLQEFVAHASTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHSS 150
           MTTKRAYKLQEFVAHASTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHSS
Sbjct: 1   MTTKRAYKLQEFVAHASTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHSS 60

Query: 149 GIDSVGFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCTSVDF 3
           GIDSV FDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCTSVDF
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCTSVDF 109


>ref|XP_003525689.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
           1-like [Glycine max]
          Length = 533

 Score =  213 bits (542), Expect = 1e-53
 Identities = 107/109 (98%), Positives = 107/109 (98%)
 Frame = -3

Query: 329 MTTKRAYKLQEFVAHASTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHSS 150
           MTTKRAYKLQEFVAHASTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHSS
Sbjct: 1   MTTKRAYKLQEFVAHASTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHSS 60

Query: 149 GIDSVGFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCTSVDF 3
           GIDSV FDSSEVLVAAGAASGTIKLWDLEEAKIVRTLT HRSNCTSVDF
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTSHRSNCTSVDF 109


>ref|XP_002311885.1| predicted protein [Populus trichocarpa] gi|222851705|gb|EEE89252.1|
           predicted protein [Populus trichocarpa]
          Length = 802

 Score =  209 bits (532), Expect = 2e-52
 Identities = 104/109 (95%), Positives = 107/109 (98%)
 Frame = -3

Query: 329 MTTKRAYKLQEFVAHASTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHSS 150
           MTTKRAYKLQEFVAH+S+VNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGH+S
Sbjct: 1   MTTKRAYKLQEFVAHSSSVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60

Query: 149 GIDSVGFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCTSVDF 3
           GIDSV FDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNC SVDF
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDF 109


>ref|XP_002316424.1| predicted protein [Populus trichocarpa] gi|222865464|gb|EEF02595.1|
           predicted protein [Populus trichocarpa]
          Length = 728

 Score =  209 bits (531), Expect = 2e-52
 Identities = 103/109 (94%), Positives = 107/109 (98%)
 Frame = -3

Query: 329 MTTKRAYKLQEFVAHASTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHSS 150
           MTTKRAYKLQEFVAH+S+VNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGH+S
Sbjct: 1   MTTKRAYKLQEFVAHSSSVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60

Query: 149 GIDSVGFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCTSVDF 3
           GIDSV FDSSEVLVAAGAASGT+KLWDLEEAKIVRTLTGHRSNC SVDF
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTVKLWDLEEAKIVRTLTGHRSNCISVDF 109


>ref|XP_002268907.2| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
           1-like [Vitis vinifera]
          Length = 800

 Score =  208 bits (529), Expect = 4e-52
 Identities = 103/109 (94%), Positives = 107/109 (98%)
 Frame = -3

Query: 329 MTTKRAYKLQEFVAHASTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHSS 150
           MTTKRAYKLQEFVAH+S+VNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGH+S
Sbjct: 1   MTTKRAYKLQEFVAHSSSVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60

Query: 149 GIDSVGFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCTSVDF 3
           GIDSV FDSSE+LVAAGAASGTIKLWDLEEAKIVRTLTGHRSNC SVDF
Sbjct: 61  GIDSVSFDSSELLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDF 109


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