BLASTX nr result

ID: Glycyrrhiza24_contig00006321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006321
         (1504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240131.1| uncharacterized protein LOC100796509 [Glycin...   496   e-138
ref|XP_003556085.1| PREDICTED: arginine/serine-rich-splicing fac...   486   e-135
ref|XP_003592315.1| Arginine/serine-rich-splicing factor RSP40 [...   459   e-127
gb|AFK42190.1| unknown [Medicago truncatula]                          457   e-126
ref|XP_002322436.1| predicted protein [Populus trichocarpa] gi|2...   352   1e-94

>ref|NP_001240131.1| uncharacterized protein LOC100796509 [Glycine max]
            gi|255636874|gb|ACU18770.1| unknown [Glycine max]
          Length = 374

 Score =  496 bits (1276), Expect = e-138
 Identities = 257/373 (68%), Positives = 271/373 (72%), Gaps = 2/373 (0%)
 Frame = +1

Query: 43   GKMRPIFCGNFEYDARQSELERLFKRYGKVDRVDMKSGFAFIYMXXXXXXXXXXXXXXXV 222
            GKMRPIFCGNFEYDARQSELERLF+RYGKVDRVDMKSGFAFIYM               V
Sbjct: 4    GKMRPIFCGNFEYDARQSELERLFRRYGKVDRVDMKSGFAFIYMEDERDAEAAIRALDRV 63

Query: 223  EFGRKGRRLRVEWTKHEXXXXXXXXXXXXXXXXXXXKTLFVINFDTYHTRTRDIERHFEP 402
            EFGRKGRRLRVEWTKHE                   KTLFVINFDTYHTRTRD+ERHFEP
Sbjct: 64   EFGRKGRRLRVEWTKHERGVRRPASSRRSSAIGRPSKTLFVINFDTYHTRTRDLERHFEP 123

Query: 403  YGKIVSVRIRRNFAFVQYESEDDACRALEATNNSKLMDRVISVEFAVKDDDDRRNGYSPE 582
            YGKIVSVRIRRNFAFVQYESEDDA RALEATN SKL+DRVISVEFAVKDDDDRRNGYSPE
Sbjct: 124  YGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPE 183

Query: 583  XXXXXXXXXXXXXXXXXXXXXXERGSPDYGRGSSPYKREXXXXXXXXXXXXXXXXXXXXX 762
                                  ERGSPDYGRG SPY+RE                     
Sbjct: 184  RGRDRQRDRSRDGRRSPSPYRKERGSPDYGRGPSPYQRERGSPDYGRDRSRSRSPPRRER 243

Query: 763  XXXAYGRRSISPYRRERDGSDAAVRDTSRSPYHKERVRTDR--SPSHSPEGRERTSPENG 936
               AYGRRSISPYRRER+GS+  VRD+SRSPYHKER RTD   SPS SPEGR R SP+NG
Sbjct: 244  ASPAYGRRSISPYRREREGSE-PVRDSSRSPYHKERGRTDHGISPSQSPEGRGRKSPQNG 302

Query: 937  NGSGHSPYDTMQASPENGHDSRHSPDAKGNPSPYNGYGGSPNTMPEPRDSPNYGGPESPM 1116
            +GS  SP DT + SPENGH S  SPD KGNPSPYNGYGGSPNT+P+PRDSPNYGGPESPM
Sbjct: 303  HGSSRSPRDTGKTSPENGHGS-GSPDEKGNPSPYNGYGGSPNTVPDPRDSPNYGGPESPM 361

Query: 1117 HEQYRSKSPPAEE 1155
            HE+Y S+SPPAEE
Sbjct: 362  HERYHSQSPPAEE 374


>ref|XP_003556085.1| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Glycine
            max]
          Length = 376

 Score =  486 bits (1250), Expect = e-135
 Identities = 254/375 (67%), Positives = 271/375 (72%), Gaps = 4/375 (1%)
 Frame = +1

Query: 43   GKMRPIFCGNFEYDARQSELERLFKRYGKVDRVDMKSGFAFIYMXXXXXXXXXXXXXXXV 222
            GKMRPIFCGNFEYDARQSELERLF+RYGKVDRVDMKSGFAFIYM               V
Sbjct: 4    GKMRPIFCGNFEYDARQSELERLFRRYGKVDRVDMKSGFAFIYMEDERDAEAAIRALDRV 63

Query: 223  EFGRKGRRLRVEWTKHEXXXXXXXXXXXXXXXXXXXKTLFVINFDTYHTRTRDIERHFEP 402
            EFGRKGRRLRVEWTKHE                   KTLFVINFDTYHTRTRD+ERHFEP
Sbjct: 64   EFGRKGRRLRVEWTKHERGVRKPASSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEP 123

Query: 403  YGKIVSVRIRRNFAFVQYESEDDACRALEATNNSKLMDRVISVEFAVKDDDDRRNGYSPE 582
            YGKIVSVRIRRNFAFVQYESEDDA RALEATN SKL+DRVISVEFAVKDDDDRRNGYSPE
Sbjct: 124  YGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPE 183

Query: 583  XXXXXXXXXXXXXXXXXXXXXXERGSPDYGRGSSPYKRE--XXXXXXXXXXXXXXXXXXX 756
                                  ERGSPDYGRG SPY+RE                     
Sbjct: 184  RGRDRHRDRSRDGRRSPSPYRRERGSPDYGRGPSPYQRERGSPDYGRDRDRSRSRSPPRR 243

Query: 757  XXXXXAYGRRSISPYRRERDGSDAAVRDTSRSPYHKERVRTDR--SPSHSPEGRERTSPE 930
                 AYGRRS+SP+RRER+GS+  VRD+SRSPYHKER RTD   SPS SPEGR + SP+
Sbjct: 244  ERASPAYGRRSLSPHRREREGSE-PVRDSSRSPYHKERGRTDHGISPSQSPEGRGKKSPQ 302

Query: 931  NGNGSGHSPYDTMQASPENGHDSRHSPDAKGNPSPYNGYGGSPNTMPEPRDSPNYGGPES 1110
            NG+GS  SP+DT + SPENG  S  SPD KGNPSPYNGYGGSPN MP+PRDSPNYGGPES
Sbjct: 303  NGHGSSRSPHDTGKTSPENGLGS-GSPDEKGNPSPYNGYGGSPNNMPDPRDSPNYGGPES 361

Query: 1111 PMHEQYRSKSPPAEE 1155
            PMHE+YRS+SPPAEE
Sbjct: 362  PMHERYRSQSPPAEE 376


>ref|XP_003592315.1| Arginine/serine-rich-splicing factor RSP40 [Medicago truncatula]
            gi|355481363|gb|AES62566.1| Arginine/serine-rich-splicing
            factor RSP40 [Medicago truncatula]
          Length = 430

 Score =  459 bits (1182), Expect = e-127
 Identities = 246/391 (62%), Positives = 266/391 (68%), Gaps = 21/391 (5%)
 Frame = +1

Query: 46   KMRPIFCGNFEYDARQSELERLFKRYGKVDRVDMKSGFAFIYMXXXXXXXXXXXXXXXVE 225
            KM+ IFCGNFEYD R+SELERLF+RYGKVDRVDMK+GFAFIYM               +E
Sbjct: 42   KMKAIFCGNFEYDCRESELERLFRRYGKVDRVDMKAGFAFIYMEDERDAEAAIRALDRIE 101

Query: 226  FGRKGRRLRVEWTKHEXXXXXXXXXXXXXXXXXXX-KTLFVINFDTYHTRTRDIERHFEP 402
            FGRKGRRLRVEWTK E                    KTLFVINFDTY TRTRD+ERHFEP
Sbjct: 102  FGRKGRRLRVEWTKQERGVRRPAERPKRSSANARPSKTLFVINFDTYQTRTRDLERHFEP 161

Query: 403  YGKIVSVRIRRNFAFVQYESEDDACRALEATNNSKLMDRVISVEFAVKDDDDRRNGYSPE 582
            YGKIVSVRIR+NFAFVQYESEDDAC+ALEATNNSKLMDRVISVEFA + DDDRRNG+SP+
Sbjct: 162  YGKIVSVRIRKNFAFVQYESEDDACKALEATNNSKLMDRVISVEFAAR-DDDRRNGHSPD 220

Query: 583  XXXXXXXXXXXXXXXXXXXXXXERGSPDYGRGSSPYKREXXXXXXXXXXXXXXXXXXXXX 762
                                  ERGSPDYGRG SPYKRE                     
Sbjct: 221  RGRDRQRDRSRDGRRSPSPYRRERGSPDYGRGPSPYKRERSSPDYGRGNSRSRSPHRRER 280

Query: 763  XXXAYGRRSISPYRRERDGSDAAVRDTSRSPYHKERVRTDRSPSHSPEGRERTSPENGNG 942
               AYGRR+ SPYRRERDG++ AVRDTSRSPYHKER RTDRS SHS E  ER  P+ G+G
Sbjct: 281  GSPAYGRRNPSPYRRERDGAE-AVRDTSRSPYHKERRRTDRSRSHSLEEGERIEPQKGHG 339

Query: 943  SGHSPYDTMQASPENGHDSRH------------------SPDAKGNPSPYNGYGGSPNTM 1068
            S  SPY T++ SPENGHD R                   SPDAKGNPSPYN YGGSPNTM
Sbjct: 340  SDPSPYGTVKDSPENGHDRRRSPDAKRNPSPFNGSRGSPSPDAKGNPSPYNDYGGSPNTM 399

Query: 1069 PEPRDSPNYGGPESPMHEQYR--SKSPPAEE 1155
            PEPRDSPNYGGPESPM+EQYR  S+SPPAEE
Sbjct: 400  PEPRDSPNYGGPESPMNEQYRSQSQSPPAEE 430


>gb|AFK42190.1| unknown [Medicago truncatula]
          Length = 388

 Score =  457 bits (1177), Expect = e-126
 Identities = 245/390 (62%), Positives = 265/390 (67%), Gaps = 21/390 (5%)
 Frame = +1

Query: 49   MRPIFCGNFEYDARQSELERLFKRYGKVDRVDMKSGFAFIYMXXXXXXXXXXXXXXXVEF 228
            M+ IFCGNFEYD R+SELERLF+RYGKVDRVDMK+GFAFIYM               +EF
Sbjct: 1    MKAIFCGNFEYDCRESELERLFRRYGKVDRVDMKAGFAFIYMEDERDAEAVIRALDRIEF 60

Query: 229  GRKGRRLRVEWTKHEXXXXXXXXXXXXXXXXXXX-KTLFVINFDTYHTRTRDIERHFEPY 405
            GRKGRRLRVEWTK E                    KTLFVINFDTY TRTRD+ERHFEPY
Sbjct: 61   GRKGRRLRVEWTKQERGVRRPAERPKRSSANARPSKTLFVINFDTYQTRTRDLERHFEPY 120

Query: 406  GKIVSVRIRRNFAFVQYESEDDACRALEATNNSKLMDRVISVEFAVKDDDDRRNGYSPEX 585
            GKIVSVRIR+NFAFVQYESEDDAC+ALEATNNSKLMDRVISVEFA + DDDRRNG+SP+ 
Sbjct: 121  GKIVSVRIRKNFAFVQYESEDDACKALEATNNSKLMDRVISVEFAAR-DDDRRNGHSPDR 179

Query: 586  XXXXXXXXXXXXXXXXXXXXXERGSPDYGRGSSPYKREXXXXXXXXXXXXXXXXXXXXXX 765
                                 ERGSPDYGRG SPYKRE                      
Sbjct: 180  GRDRQRDRSRDGRRSPSPYRRERGSPDYGRGPSPYKRERSSPDYGRGNSRSRSPHRRERG 239

Query: 766  XXAYGRRSISPYRRERDGSDAAVRDTSRSPYHKERVRTDRSPSHSPEGRERTSPENGNGS 945
              AYGRR+ SPYRRERDG++ AVRDTSRSPYHKER RTDRS SHS E  ER  P+ G+GS
Sbjct: 240  SPAYGRRNPSPYRRERDGAE-AVRDTSRSPYHKERRRTDRSRSHSLEEGERIEPQKGHGS 298

Query: 946  GHSPYDTMQASPENGHDSRH------------------SPDAKGNPSPYNGYGGSPNTMP 1071
              SPY T++ SPENGHD R                   SPDAKGNPSPYN YGGSPNTMP
Sbjct: 299  DPSPYGTVKDSPENGHDRRRSPDAKRNPSPFNGSRGSPSPDAKGNPSPYNDYGGSPNTMP 358

Query: 1072 EPRDSPNYGGPESPMHEQYR--SKSPPAEE 1155
            EPRDSPNYGGPESPM+EQYR  S+SPPAEE
Sbjct: 359  EPRDSPNYGGPESPMNEQYRSQSQSPPAEE 388


>ref|XP_002322436.1| predicted protein [Populus trichocarpa] gi|222869432|gb|EEF06563.1|
            predicted protein [Populus trichocarpa]
          Length = 343

 Score =  352 bits (904), Expect = 1e-94
 Identities = 195/364 (53%), Positives = 229/364 (62%), Gaps = 8/364 (2%)
 Frame = +1

Query: 49   MRPIFCGNFEYDARQSELERLFKRYGKVDRVDMKSGFAFIYMXXXXXXXXXXXXXXXVEF 228
            MRPIFCGNFEYDARQ+ELERLFKRYG+V+RVDMKSGFAFIYM               VEF
Sbjct: 1    MRPIFCGNFEYDARQTELERLFKRYGRVERVDMKSGFAFIYMEDERDAEDAIRGLDRVEF 60

Query: 229  GRKGRRLRVEWTKHEXXXXXXXXXXXXXXXXXXXKTLFVINFDTYHTRTRDIERHFEPYG 408
            GRKGRRLRVEWTK E                   KTLFVINFD +HTRT+D+ERHFEPYG
Sbjct: 61   GRKGRRLRVEWTKQERGIRRPGGTSRRSTNTRPSKTLFVINFDPHHTRTKDLERHFEPYG 120

Query: 409  KIVSVRIRRNFAFVQYESEDDACRALEATNNSKLMDRVISVEFAVKDDDDRRNGYSPE-X 585
            +IVSVRIRRNFAFVQYE+++DA +AL+ATN SKL+DRVISVE+AV+DDD+R++GYSP+  
Sbjct: 121  RIVSVRIRRNFAFVQYEAQEDATKALDATNLSKLLDRVISVEYAVRDDDERKDGYSPDRS 180

Query: 586  XXXXXXXXXXXXXXXXXXXXXERGSPDYGRGSSPYKREXXXXXXXXXXXXXXXXXXXXXX 765
                                 ERGSPDYGRG SPY++E                      
Sbjct: 181  RDRSPDRRGHDRRRSPSPYRRERGSPDYGRGPSPYRKERGSPD----------------- 223

Query: 766  XXAYG-RRSISPYRRERDGSDAAVRDTSRSPYHKERV------RTDRSPSHSPEGRERTS 924
               YG RRS SPYRR+R   D   R TSRSPY +ER          R PS SP  RER++
Sbjct: 224  ---YGRRRSPSPYRRDRASPDYG-RGTSRSPYRRERAGKRISPENGRGPSRSPYRRERSN 279

Query: 925  PENGNGSGHSPYDTMQASPENGHDSRHSPDAKGNPSPYNGYGGSPNTMPEPRDSPNYGGP 1104
              +G GS HSPY   + +P+NG  S  SP  +   SP NG   SP+++P+ RDSPN GG 
Sbjct: 280  QGHGRGSSHSPYGRERPNPDNGRGSSRSPTERDGDSPENGQLRSPSSIPDERDSPN-GGA 338

Query: 1105 ESPM 1116
            ESPM
Sbjct: 339  ESPM 342


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