BLASTX nr result

ID: Glycyrrhiza24_contig00006305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006305
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604547.1| 30S ribosomal protein S17 [Medicago truncatu...   184   1e-44
gb|AFK45737.1| unknown [Lotus japonicus] gi|388520851|gb|AFK4848...   182   3e-44
ref|XP_003529179.1| PREDICTED: 30S ribosomal protein S17-like [G...   181   1e-43
gb|AFK39323.1| unknown [Medicago truncatula]                          180   2e-43
ref|XP_003618144.1| 30S ribosomal protein S17 [Medicago truncatu...   177   9e-43

>ref|XP_003604547.1| 30S ribosomal protein S17 [Medicago truncatula]
           gi|355505602|gb|AES86744.1| 30S ribosomal protein S17
           [Medicago truncatula]
          Length = 172

 Score =  184 bits (467), Expect = 1e-44
 Identities = 90/104 (86%), Positives = 97/104 (93%)
 Frame = +1

Query: 25  SEKMKQVVGMVVSNKMQKSVVVAVDRLFHHKIYNRYVKRTSKFMAHDEHNLCNIGDRVRL 204
           +EKMKQVVGMVVSNKMQKSVVVAVDRLFHHK++NRY+KRTSKFMAHDE+NLCNIGDRVRL
Sbjct: 67  AEKMKQVVGMVVSNKMQKSVVVAVDRLFHHKMFNRYIKRTSKFMAHDENNLCNIGDRVRL 126

Query: 205 DPSRPLSKRKHWVVAEILKKARIYVPPSAPVSENVSSSTEAPKS 336
           D SRPLSK KHWVVAEILKKARIYVPPSA VSEN SS++  P S
Sbjct: 127 DSSRPLSKHKHWVVAEILKKARIYVPPSATVSENASSNSVGPTS 170


>gb|AFK45737.1| unknown [Lotus japonicus] gi|388520851|gb|AFK48487.1| unknown
           [Lotus japonicus]
          Length = 102

 Score =  182 bits (463), Expect = 3e-44
 Identities = 93/102 (91%), Positives = 96/102 (94%), Gaps = 1/102 (0%)
 Frame = +1

Query: 34  MKQVVGMVVSNKMQKSVVVAVDRLFHHKIYNRYVKRTSKFMAHDEHNLCNIGDRVRLDPS 213
           MKQVVGMVVSNKMQKSVVVAVDRLFHHK+YNRYVKRTSKFMAHDE+NLCNIGDRVRL+PS
Sbjct: 1   MKQVVGMVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNLCNIGDRVRLNPS 60

Query: 214 RPLSKRKHWVVAEILKKARIYVPP-SAPVSENVSSSTEAPKS 336
           RPLSK K WVVAEILKKARIYVPP S PVSE VSSSTEAP S
Sbjct: 61  RPLSKNKCWVVAEILKKARIYVPPTSTPVSEKVSSSTEAPAS 102


>ref|XP_003529179.1| PREDICTED: 30S ribosomal protein S17-like [Glycine max]
          Length = 101

 Score =  181 bits (458), Expect = 1e-43
 Identities = 88/101 (87%), Positives = 96/101 (95%)
 Frame = +1

Query: 34  MKQVVGMVVSNKMQKSVVVAVDRLFHHKIYNRYVKRTSKFMAHDEHNLCNIGDRVRLDPS 213
           MKQVVGMVVSNKMQKSVVVAVDRLF+HK+Y+RYVKRTSKFMAHDE+NLCNIGD+VRLDPS
Sbjct: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKVYDRYVKRTSKFMAHDENNLCNIGDKVRLDPS 60

Query: 214 RPLSKRKHWVVAEILKKARIYVPPSAPVSENVSSSTEAPKS 336
           RPLSK KHWVVAEILKKA+IYVPPS PVS NV+SS+ AP S
Sbjct: 61  RPLSKHKHWVVAEILKKAQIYVPPSTPVSVNVNSSSVAPAS 101


>gb|AFK39323.1| unknown [Medicago truncatula]
          Length = 103

 Score =  180 bits (456), Expect = 2e-43
 Identities = 88/101 (87%), Positives = 94/101 (93%)
 Frame = +1

Query: 34  MKQVVGMVVSNKMQKSVVVAVDRLFHHKIYNRYVKRTSKFMAHDEHNLCNIGDRVRLDPS 213
           MKQVVGMVVSNKMQKSVVVAVDRLFHHK++NRY+KRTSKFMAHDE+NLCNIGDRVRLD S
Sbjct: 1   MKQVVGMVVSNKMQKSVVVAVDRLFHHKMFNRYIKRTSKFMAHDENNLCNIGDRVRLDSS 60

Query: 214 RPLSKRKHWVVAEILKKARIYVPPSAPVSENVSSSTEAPKS 336
           RPLSK KHWVVAEILKKARIYVPPSA VSEN SS++  P S
Sbjct: 61  RPLSKHKHWVVAEILKKARIYVPPSATVSENASSNSVGPTS 101


>ref|XP_003618144.1| 30S ribosomal protein S17 [Medicago truncatula]
           gi|355493159|gb|AES74362.1| 30S ribosomal protein S17
           [Medicago truncatula]
          Length = 103

 Score =  177 bits (450), Expect = 9e-43
 Identities = 86/96 (89%), Positives = 93/96 (96%)
 Frame = +1

Query: 34  MKQVVGMVVSNKMQKSVVVAVDRLFHHKIYNRYVKRTSKFMAHDEHNLCNIGDRVRLDPS 213
           MK+VVGMVVSNKMQKSVVVAVDRLFHHK++NRY+KRTSKFMAHDE+NLCNIGDRVRLD S
Sbjct: 1   MKEVVGMVVSNKMQKSVVVAVDRLFHHKMFNRYIKRTSKFMAHDENNLCNIGDRVRLDSS 60

Query: 214 RPLSKRKHWVVAEILKKARIYVPPSAPVSENVSSST 321
           RPLSKRKHWVVAEILKKARIYVPPSA VSEN SS++
Sbjct: 61  RPLSKRKHWVVAEILKKARIYVPPSATVSENASSNS 96


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