BLASTX nr result

ID: Glycyrrhiza24_contig00006289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006289
         (1283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539844.1| PREDICTED: transcription factor E2FB-like [G...   496   e-138
ref|XP_003538095.1| PREDICTED: transcription factor E2FB-like [G...   489   e-136
ref|XP_003606095.1| Transcription factor E2F [Medicago truncatul...   489   e-136
emb|CBI28269.3| unnamed protein product [Vitis vinifera]              415   e-113
ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [V...   415   e-113

>ref|XP_003539844.1| PREDICTED: transcription factor E2FB-like [Glycine max]
          Length = 450

 Score =  496 bits (1278), Expect = e-138
 Identities = 250/288 (86%), Positives = 258/288 (89%)
 Frame = -3

Query: 1281 TLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSKPGEADDSFASLQAXXXXXXXX 1102
            TLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVS+PGEADDSFASLQA        
Sbjct: 163  TLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSRPGEADDSFASLQAEVENLTMK 222

Query: 1101 XXXXXEQIREMQERLRDLSEDENNEKLLFVTEEDIKNLPCFLNETLIAIKAPHGTTLEVP 922
                 EQIREMQERLRDLSEDENN+KLLFVTEEDIKNLPCF NETLIAIKAPHGTTLEVP
Sbjct: 223  ERQLDEQIREMQERLRDLSEDENNDKLLFVTEEDIKNLPCFQNETLIAIKAPHGTTLEVP 282

Query: 921  DPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQFEEKFEEINGVDVAPKFPSSPEFNKHQST 742
            DPDEAVDY QRRYRIVLRSTMGPID+YLVSQFEEKFEEING DVAPK PSSP+  K QST
Sbjct: 283  DPDEAVDYLQRRYRIVLRSTMGPIDLYLVSQFEEKFEEINGADVAPKLPSSPDVTKQQST 342

Query: 741  VVPEDKGKDIEVQGQDGHGPSSDFTNSQDFVSGIMKIVPSDVASDADYWLLSDADVSITD 562
            VVPED+GK IEVQGQ   GPSSDFT SQDFVSGIMKIVPSDVAS+ADYWLLSDADVSITD
Sbjct: 343  VVPEDRGKHIEVQGQAAPGPSSDFTPSQDFVSGIMKIVPSDVASEADYWLLSDADVSITD 402

Query: 561  MWRTEPGVEWNELDTLQEDYCMTSEQITTPSHPSNLGEVSSASNPTGG 418
            MWRTEPGVEWNEL+ LQEDYCMT E  TTPSHPSN+GEVSSAS PTGG
Sbjct: 403  MWRTEPGVEWNELEPLQEDYCMTDENTTTPSHPSNVGEVSSASKPTGG 450


>ref|XP_003538095.1| PREDICTED: transcription factor E2FB-like [Glycine max]
          Length = 435

 Score =  489 bits (1259), Expect = e-136
 Identities = 247/288 (85%), Positives = 256/288 (88%)
 Frame = -3

Query: 1281 TLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSKPGEADDSFASLQAXXXXXXXX 1102
            TLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVS+PGEADDSF SLQA        
Sbjct: 150  TLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSRPGEADDSFPSLQAEVENLTMK 209

Query: 1101 XXXXXEQIREMQERLRDLSEDENNEKLLFVTEEDIKNLPCFLNETLIAIKAPHGTTLEVP 922
                 EQIREMQERLRDLSEDENN+KLLFVTEEDIKNLPCF NETLIAIKAPHGTTLEVP
Sbjct: 210  ERQLDEQIREMQERLRDLSEDENNDKLLFVTEEDIKNLPCFQNETLIAIKAPHGTTLEVP 269

Query: 921  DPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQFEEKFEEINGVDVAPKFPSSPEFNKHQST 742
            DPDEAVDYPQRRYRIVLRSTMGPID+YLVSQFEEKFEEINGVDVAPK PSSP+  KHQST
Sbjct: 270  DPDEAVDYPQRRYRIVLRSTMGPIDLYLVSQFEEKFEEINGVDVAPKLPSSPDGTKHQST 329

Query: 741  VVPEDKGKDIEVQGQDGHGPSSDFTNSQDFVSGIMKIVPSDVASDADYWLLSDADVSITD 562
            VVPED+GKDIEVQGQ+  GPSSDFT SQDFVSGIMKIVPSD  S+ADYWLLSDADVSITD
Sbjct: 330  VVPEDRGKDIEVQGQEAPGPSSDFTTSQDFVSGIMKIVPSD--SEADYWLLSDADVSITD 387

Query: 561  MWRTEPGVEWNELDTLQEDYCMTSEQITTPSHPSNLGEVSSASNPTGG 418
            MWRTEPGVEWNEL+ LQEDYCMT E   TPSHPSN+ EVSSA   TGG
Sbjct: 388  MWRTEPGVEWNELEPLQEDYCMTRENTATPSHPSNVDEVSSAPKSTGG 435


>ref|XP_003606095.1| Transcription factor E2F [Medicago truncatula]
            gi|355507150|gb|AES88292.1| Transcription factor E2F
            [Medicago truncatula]
          Length = 460

 Score =  489 bits (1259), Expect = e-136
 Identities = 249/291 (85%), Positives = 256/291 (87%), Gaps = 3/291 (1%)
 Frame = -3

Query: 1281 TLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSKPGEADDSFASLQAXXXXXXXX 1102
            TLEVQKRRIYDITNV EGIGLIEKKLKNRIQWKGLDVSKPGEADDSFASLQA        
Sbjct: 170  TLEVQKRRIYDITNVFEGIGLIEKKLKNRIQWKGLDVSKPGEADDSFASLQAEIENLTIE 229

Query: 1101 XXXXXEQIREMQERLRDLSEDENNEKLLFVTEEDIKNLPCFLNETLIAIKAPHGTTLEVP 922
                 EQIREMQERLR+LSEDENNEK LFVTEEDIKNLPCF NETLIAIKAPHGTTLEVP
Sbjct: 230  ERRLDEQIREMQERLRNLSEDENNEKFLFVTEEDIKNLPCFQNETLIAIKAPHGTTLEVP 289

Query: 921  DPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQFEEKFEEINGVDVAPKFPSSPE---FNKH 751
            DPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQFEEKFEEINGVDVA KFP SPE    NK 
Sbjct: 290  DPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQFEEKFEEINGVDVASKFPPSPEVNKVNKD 349

Query: 750  QSTVVPEDKGKDIEVQGQDGHGPSSDFTNSQDFVSGIMKIVPSDVASDADYWLLSDADVS 571
            QSTVVPEDKGK+IEVQ QDG GPSSD  N+ DFVSGIMKIVPSDVASDADYWLLSDADVS
Sbjct: 350  QSTVVPEDKGKEIEVQRQDGEGPSSDLNNNHDFVSGIMKIVPSDVASDADYWLLSDADVS 409

Query: 570  ITDMWRTEPGVEWNELDTLQEDYCMTSEQITTPSHPSNLGEVSSASNPTGG 418
            ITDMWRTEPGVEWNEL+ LQE+YCM  EQ TTP+H SN+GEV SASNPT G
Sbjct: 410  ITDMWRTEPGVEWNELEALQEEYCMAREQSTTPNHASNIGEVPSASNPTVG 460


>emb|CBI28269.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score =  415 bits (1066), Expect = e-113
 Identities = 212/290 (73%), Positives = 231/290 (79%), Gaps = 3/290 (1%)
 Frame = -3

Query: 1281 TLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSKPGEADDSFASLQAXXXXXXXX 1102
            TLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVS+PGE D++  SLQ         
Sbjct: 156  TLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSRPGEVDENVTSLQEEVENLSIQ 215

Query: 1101 XXXXXEQIREMQERLRDLSEDENNEKLLFVTEEDIKNLPCFLNETLIAIKAPHGTTLEVP 922
                  QIR+MQERLRDLSEDENN+K LFVTEEDIK LPCF  ETLIAIKAPHGTTLEVP
Sbjct: 216  ERRLDAQIRDMQERLRDLSEDENNQKWLFVTEEDIKGLPCFQKETLIAIKAPHGTTLEVP 275

Query: 921  DPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQFEEKFEEINGVDVAPKFPSSPEFNKHQST 742
            DPDEAVDYPQRRYRIVLRS+MGPIDVYLVSQFEEKFEEING++  P FPSS  +N+  + 
Sbjct: 276  DPDEAVDYPQRRYRIVLRSSMGPIDVYLVSQFEEKFEEINGLEAPPSFPSSSGYNEDPTA 335

Query: 741  --VVPEDKGKDIEVQGQDGHGPSSDFTNSQDFVSGIMKIVPSDVASDADYWLLSDADVSI 568
              V  E +GK+IE+QGQD H  SSD   SQDFVSGIMKIVPSDV SDADYWLLSDADVSI
Sbjct: 336  AMVTEESRGKEIEIQGQDAHRMSSDLNASQDFVSGIMKIVPSDVDSDADYWLLSDADVSI 395

Query: 567  TDMWRTEPGVEWNELDTLQEDYCMTSEQITTP-SHPSNLGEVSSASNPTG 421
            TDMWRTEPGVEWNELD L +DY M +     P + PS+  EV  A+N  G
Sbjct: 396  TDMWRTEPGVEWNELDALNDDYAMANVSTPQPQTPPSSAAEVPPAANTPG 445


>ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [Vitis vinifera]
          Length = 457

 Score =  415 bits (1066), Expect = e-113
 Identities = 212/290 (73%), Positives = 231/290 (79%), Gaps = 3/290 (1%)
 Frame = -3

Query: 1281 TLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSKPGEADDSFASLQAXXXXXXXX 1102
            TLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVS+PGE D++  SLQ         
Sbjct: 167  TLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSRPGEVDENVTSLQEEVENLSIQ 226

Query: 1101 XXXXXEQIREMQERLRDLSEDENNEKLLFVTEEDIKNLPCFLNETLIAIKAPHGTTLEVP 922
                  QIR+MQERLRDLSEDENN+K LFVTEEDIK LPCF  ETLIAIKAPHGTTLEVP
Sbjct: 227  ERRLDAQIRDMQERLRDLSEDENNQKWLFVTEEDIKGLPCFQKETLIAIKAPHGTTLEVP 286

Query: 921  DPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQFEEKFEEINGVDVAPKFPSSPEFNKHQST 742
            DPDEAVDYPQRRYRIVLRS+MGPIDVYLVSQFEEKFEEING++  P FPSS  +N+  + 
Sbjct: 287  DPDEAVDYPQRRYRIVLRSSMGPIDVYLVSQFEEKFEEINGLEAPPSFPSSSGYNEDPTA 346

Query: 741  --VVPEDKGKDIEVQGQDGHGPSSDFTNSQDFVSGIMKIVPSDVASDADYWLLSDADVSI 568
              V  E +GK+IE+QGQD H  SSD   SQDFVSGIMKIVPSDV SDADYWLLSDADVSI
Sbjct: 347  AMVTEESRGKEIEIQGQDAHRMSSDLNASQDFVSGIMKIVPSDVDSDADYWLLSDADVSI 406

Query: 567  TDMWRTEPGVEWNELDTLQEDYCMTSEQITTP-SHPSNLGEVSSASNPTG 421
            TDMWRTEPGVEWNELD L +DY M +     P + PS+  EV  A+N  G
Sbjct: 407  TDMWRTEPGVEWNELDALNDDYAMANVSTPQPQTPPSSAAEVPPAANTPG 456


Top