BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006273
         (1837 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556470.1| PREDICTED: pentatricopeptide repeat-containi...   713   0.0  
ref|XP_003536123.1| PREDICTED: pentatricopeptide repeat-containi...   706   0.0  
ref|XP_003630353.1| Pentatricopeptide repeat-containing protein ...   697   0.0  
gb|AFK45023.1| unknown [Medicago truncatula]                          697   0.0  
ref|XP_004138218.1| PREDICTED: pentatricopeptide repeat-containi...   627   e-177

>ref|XP_003556470.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
            mitochondrial-like isoform 1 [Glycine max]
            gi|356576706|ref|XP_003556471.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g60960,
            mitochondrial-like isoform 2 [Glycine max]
          Length = 509

 Score =  713 bits (1840), Expect = 0.0
 Identities = 360/474 (75%), Positives = 401/474 (84%)
 Frame = +2

Query: 179  HTPTLFAPPSLFNTRHFSSEPVTPTQTRPNDPDPIALALSSELLRDPDSDPHSVSQHLHL 358
            H+ TL  P SLF  RHFSSE    TQT     D IA +LSSELL++PDSD  SVSQ LHL
Sbjct: 42   HSRTLLTPSSLFIIRHFSSE----TQT-----DQIAHSLSSELLKEPDSDALSVSQRLHL 92

Query: 359  SFSHITPTPDLVLQTLNLSTEAGRSVLGFHQWLASNPKFTHTDDTLSYFVDYFGRRKDFK 538
            SFSHITPTP+L+LQTLNLS E+GR+VLGFHQWL+SNP+F+HTDDTLSYFVDYFGRRKDFK
Sbjct: 93   SFSHITPTPNLILQTLNLSHESGRTVLGFHQWLSSNPQFSHTDDTLSYFVDYFGRRKDFK 152

Query: 539  ATHEVLAAAAGGRAGEKTLVSAIDRLVRAGRPNRAVQFFDRMENDYGLKRDRNSLKVIVE 718
            ATH+VL+AA+   AG KTL SAIDRLVRAGRP++AVQFF+RME DYGLKRDR SLKV+VE
Sbjct: 153  ATHDVLSAASPA-AGPKTLASAIDRLVRAGRPSQAVQFFERMERDYGLKRDRASLKVVVE 211

Query: 719  KLCMNGFASYAEKMVKDHAKEFFPDEATCNLLITGWCVDGKLEEARRLAGEMYRGGFEPG 898
            KLC  GFASYAEKMVKD AK FFPDEATC++LI GWCVDGKL+EA+RLAGEMYRGGFE G
Sbjct: 212  KLCSKGFASYAEKMVKDLAKVFFPDEATCDMLIKGWCVDGKLDEAQRLAGEMYRGGFELG 271

Query: 899  VGAYNAMLDCVCKLCRQKDPFRLQSEAEKVLVEMDYHGVPRNVETFNVLITNLCKIRKNG 1078
            VG+YNAMLDCVCKLCRQKDPF+L SEAEKVLVEM++ GVPRNVETFNVLITNLCKIRK  
Sbjct: 272  VGSYNAMLDCVCKLCRQKDPFQLHSEAEKVLVEMEHRGVPRNVETFNVLITNLCKIRKTE 331

Query: 1079 DALGLFHRMGEWGCQPNETTFLVLIRSLYQAARLEDGDEMIERMKWYGHGSSLDKKAYYK 1258
            DALGLF  MGEWGC PNETTFLVLIRSLYQAARLE+GDEMI+RM+  G G  LDKKAYY+
Sbjct: 332  DALGLFRSMGEWGCYPNETTFLVLIRSLYQAARLEEGDEMIDRMRSAGFGEFLDKKAYYQ 391

Query: 1259 LITILCGIERIDHALKVFAMMKADGCEPGVKTYELLMSKLGAHNRVGKVNALFNEARGRG 1438
            L+ ILCGIER+DHAL VFAMMK  GCEPG+ TY+LLM KLGAHNR+ K NALFNEA+ RG
Sbjct: 392  LLKILCGIERVDHALSVFAMMKDGGCEPGLITYDLLMGKLGAHNRIDKANALFNEAKSRG 451

Query: 1439 LAVAQKEYAVDPRYXXXXXXXXXXXXXXTLPEKMARKKRRLQQIRLSFVRKPRQ 1600
            L V  KEYAVDPRY              TLPEKMARK+ RL+QIRLSFV+KP++
Sbjct: 452  LPVMLKEYAVDPRYLKKKKVVKGVKKRETLPEKMARKRSRLKQIRLSFVKKPKR 505


>ref|XP_003536123.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
            mitochondrial-like [Glycine max]
          Length = 509

 Score =  706 bits (1822), Expect = 0.0
 Identities = 358/475 (75%), Positives = 403/475 (84%), Gaps = 1/475 (0%)
 Frame = +2

Query: 179  HTPTLFAPPSLFNTRHFSSEPVTPTQTRPNDPDPIALALSSELLRDPDSDPHSVSQHLHL 358
            ++ TLF P S F TRHFSSE    TQT     D IA +LSSELL++PDSD  SVSQ L+L
Sbjct: 42   YSRTLFTP-SFFITRHFSSE----TQT-----DEIASSLSSELLKEPDSDALSVSQRLNL 91

Query: 359  SFSHITPTPDLVLQTLNLSTEAGRSVLGFHQWLASNPKFTHTDDTLSYFVDYFGRRKDFK 538
            SFSHITPTP+L+LQTLNLS +AGR+VLGFHQWL+SNP+F+HTDDTLSYFVDYFGRRKDFK
Sbjct: 92   SFSHITPTPNLILQTLNLSPQAGRTVLGFHQWLSSNPQFSHTDDTLSYFVDYFGRRKDFK 151

Query: 539  ATHEVLAAAAGGRAGEKTLVSAIDRLVRAGRPNRAVQFFDRMENDYGLKRDRNSLKVIVE 718
            ATH+VLAAA+   AG KTL SAIDRLVRAGR ++AVQFF+RME DYGLKRDR+SLKV+VE
Sbjct: 152  ATHDVLAAASPA-AGPKTLASAIDRLVRAGRSSQAVQFFERMERDYGLKRDRDSLKVVVE 210

Query: 719  KLCMNGFASYAEKMVKDHAKEFFPDEATCNLLITGWCVDGKLEEARRLAGEMYRGGFEPG 898
            KLC  GFASYAEKMVKD A+EFFPDEATC++LI GWC+DGKL+EA+RLAGEMYRGGF+ G
Sbjct: 211  KLCSEGFASYAEKMVKDLAREFFPDEATCDMLIRGWCIDGKLDEAQRLAGEMYRGGFDLG 270

Query: 899  VGAYNAMLDCVCKLCRQKDPFRLQSEAEKVLVEMDYHGVPRNVETFNVLITNLCKIRKNG 1078
            VGAYNAMLDCVCKLCR+KDPF+L SEAEKVLVEM+Y GVPRN ETFNVLITNLCKIRK  
Sbjct: 271  VGAYNAMLDCVCKLCREKDPFQLHSEAEKVLVEMEYRGVPRNTETFNVLITNLCKIRKTE 330

Query: 1079 DALGLFHRMGEWGCQPNETTFLVLIRSLYQAARLEDGDEMIERMKWYGHGSSLDKKAYYK 1258
            DALGL H MGEWGC PNETTFLVLIRSLYQAARLE+GDEMI+RM+  G G  LDKKAYY+
Sbjct: 331  DALGLLHSMGEWGCYPNETTFLVLIRSLYQAARLEEGDEMIDRMRSAGFGEFLDKKAYYQ 390

Query: 1259 LITILCGIERIDHALKVFAMMKADGCEPGVKTYELLMSKLGAHNRVGKVNALFNEARGRG 1438
             + ILCGIER+DHAL VFAMMK DGCEPGV TY+LLM KLGAHNR+ KVNALFNEA+ RG
Sbjct: 391  FLKILCGIERVDHALSVFAMMKDDGCEPGVITYDLLMGKLGAHNRIDKVNALFNEAKSRG 450

Query: 1439 LAVAQKEYAVDPRY-XXXXXXXXXXXXXXTLPEKMARKKRRLQQIRLSFVRKPRQ 1600
            L V  KEYAVDPRY               TLPEKMARK+ RL+QIRLS+V+KP++
Sbjct: 451  LPVILKEYAVDPRYLKKKKKVVKGVKKRETLPEKMARKRSRLKQIRLSYVKKPKR 505


>ref|XP_003630353.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355524375|gb|AET04829.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  697 bits (1800), Expect = 0.0
 Identities = 342/476 (71%), Positives = 399/476 (83%), Gaps = 2/476 (0%)
 Frame = +2

Query: 179  HTPTLFAPPSLFNTRHFSSEPVTPTQTRPNDPDPIALALSSELLRDPDSDPHSVSQHLHL 358
            H   LF PPSLF   HFSSE   P      +PDPIA+A+SSELL++PDSDP SV+Q L+L
Sbjct: 46   HNRALFTPPSLFQIEHFSSES-KPEPVSTTEPDPIAIAISSELLKEPDSDPSSVTQRLNL 104

Query: 359  SFSHITPTPDLVLQTLNLSTEAGRSVLGFHQWLASNPKFTHTDDTLSYFVDYFGRRKDFK 538
            SFSHITPTP+L+L+TLNLS EAGR+VLGFHQWLASNPKFTHTD+TLSYFVDYFGRRKDFK
Sbjct: 105  SFSHITPTPNLILETLNLSLEAGRNVLGFHQWLASNPKFTHTDETLSYFVDYFGRRKDFK 164

Query: 539  ATHEVLAAAAGGRAGEKTLVSAIDRLVRAGRPNRAVQFFDRMENDYGLKRDRNSLKVIVE 718
            AT ++L+   GG  G+KTL+SA+DRLVRAGR ++AVQFF+RME DYGLKRDR+S+KV+VE
Sbjct: 165  ATDKILS---GGGGGQKTLLSAVDRLVRAGRQSQAVQFFERMEKDYGLKRDRSSMKVVVE 221

Query: 719  KLCMNGFASYAEKMVKDHAKEFFPDEATCNLLITGWCVDGKLEEARRLAGEMYRGGFEPG 898
            KLC+ G+ASYAEKM  D AKEFFPDE  C+LL+ G+C+DGK+EEARRLAGEMYRGGFE G
Sbjct: 222  KLCLKGYASYAEKMTTDLAKEFFPDEEICDLLVAGYCIDGKIEEARRLAGEMYRGGFELG 281

Query: 899  VGAYNAMLDCVCKLCRQKDPFRLQSEAEKVLVEMDYHGVPRNVETFNVLITNLCKIRKNG 1078
            V AYNAMLDCVCK+CR+KDPF+L SE++KVLVEMD HGVPRN+ETFNVLITN CKIRK  
Sbjct: 282  VRAYNAMLDCVCKMCREKDPFQLHSESKKVLVEMDSHGVPRNLETFNVLITNFCKIRKTN 341

Query: 1079 DALGLFHRMGEWGCQPNETTFLVLIRSLYQAARLEDGDEMIERMKWYGHGSSLDKKAYYK 1258
            DALGLF+ M +W C PNETTFLVLI+SLYQAARLE+GD MI+ MK  G+G+ LDKKAY+ 
Sbjct: 342  DALGLFNFMRQWRCNPNETTFLVLIKSLYQAARLEEGDAMIDGMKSAGYGAFLDKKAYFD 401

Query: 1259 LITILCGIERIDHALKVFAMMKADGCEPGVKTYELLMSKLGAHNRVGKVNALFNEARGRG 1438
             +TILCGIERI+HALK+F MMKADGCEPGVKTY+LLM KLGAH+RV K NALFNEAR RG
Sbjct: 402  FLTILCGIERINHALKIFTMMKADGCEPGVKTYDLLMKKLGAHDRVDKANALFNEARSRG 461

Query: 1439 LAVAQKEYAVDPRY--XXXXXXXXXXXXXXTLPEKMARKKRRLQQIRLSFVRKPRQ 1600
            L V  KE+ VDPR+                TLPEKMARK+RRL+QIRLSFV+KP++
Sbjct: 462  LDVTLKEHVVDPRFSKKKEKKAVKAEKKRETLPEKMARKRRRLKQIRLSFVKKPKK 517


>gb|AFK45023.1| unknown [Medicago truncatula]
          Length = 521

 Score =  697 bits (1800), Expect = 0.0
 Identities = 342/476 (71%), Positives = 399/476 (83%), Gaps = 2/476 (0%)
 Frame = +2

Query: 179  HTPTLFAPPSLFNTRHFSSEPVTPTQTRPNDPDPIALALSSELLRDPDSDPHSVSQHLHL 358
            H   LF PPSLF   HFSSE   P      +PDPIA+A+SSELL++PDSDP SV+Q L+L
Sbjct: 46   HNRALFTPPSLFQIEHFSSES-KPEPVSTTEPDPIAIAISSELLKEPDSDPSSVTQRLNL 104

Query: 359  SFSHITPTPDLVLQTLNLSTEAGRSVLGFHQWLASNPKFTHTDDTLSYFVDYFGRRKDFK 538
            SFSHITPTP+L+L+TLNLS EAGR+VLGFHQWLASNPKFTHTD+TLSYFVDYFGRRKDFK
Sbjct: 105  SFSHITPTPNLILETLNLSLEAGRNVLGFHQWLASNPKFTHTDETLSYFVDYFGRRKDFK 164

Query: 539  ATHEVLAAAAGGRAGEKTLVSAIDRLVRAGRPNRAVQFFDRMENDYGLKRDRNSLKVIVE 718
            AT ++L+   GG  G+KTL+SA+DRLVRAGR ++AVQFF+RME DYGLKRDR+S+KV+VE
Sbjct: 165  ATDKILS---GGGGGQKTLLSAVDRLVRAGRQSQAVQFFERMEKDYGLKRDRSSMKVVVE 221

Query: 719  KLCMNGFASYAEKMVKDHAKEFFPDEATCNLLITGWCVDGKLEEARRLAGEMYRGGFEPG 898
            KLC+ G+ASYAEKM  D AKEFFPDE  C+LL+ G+C+DGK+EEARRLAGEMYRGGFE G
Sbjct: 222  KLCLKGYASYAEKMTTDLAKEFFPDEEICDLLVAGYCIDGKIEEARRLAGEMYRGGFELG 281

Query: 899  VGAYNAMLDCVCKLCRQKDPFRLQSEAEKVLVEMDYHGVPRNVETFNVLITNLCKIRKNG 1078
            V AYNAMLDCVCK+CR+KDPF+L SE++KVLVEMD HGVPRN+ETFNVLITN CKIRK  
Sbjct: 282  VRAYNAMLDCVCKMCREKDPFQLHSESKKVLVEMDSHGVPRNLETFNVLITNFCKIRKTN 341

Query: 1079 DALGLFHRMGEWGCQPNETTFLVLIRSLYQAARLEDGDEMIERMKWYGHGSSLDKKAYYK 1258
            DALGLF+ M +W C PNETTFLVLI+SLYQAARLE+GD MI+ MK  G+G+ LDKKAY+ 
Sbjct: 342  DALGLFNFMRQWRCNPNETTFLVLIKSLYQAARLEEGDAMIDGMKSAGYGAFLDKKAYFD 401

Query: 1259 LITILCGIERIDHALKVFAMMKADGCEPGVKTYELLMSKLGAHNRVGKVNALFNEARGRG 1438
             +TILCGIERI+HALK+F MMKADGCEPGVKTY+LLM KLGAH+RV K NALFNEAR RG
Sbjct: 402  FLTILCGIERINHALKIFTMMKADGCEPGVKTYDLLMKKLGAHDRVDKANALFNEARSRG 461

Query: 1439 LAVAQKEYAVDPRY--XXXXXXXXXXXXXXTLPEKMARKKRRLQQIRLSFVRKPRQ 1600
            L V  KE+ VDPR+                TLPEKMARK+RRL+QIRLSFV+KP++
Sbjct: 462  LDVTLKEHVVDPRFSKKKEKKAVKAEKKRETLPEKMARKRRRLKQIRLSFVKKPKK 517


>ref|XP_004138218.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
            mitochondrial-like [Cucumis sativus]
            gi|449477122|ref|XP_004154936.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g60960,
            mitochondrial-like [Cucumis sativus]
          Length = 522

 Score =  627 bits (1617), Expect = e-177
 Identities = 312/474 (65%), Positives = 367/474 (77%), Gaps = 1/474 (0%)
 Frame = +2

Query: 194  FAPPSLFNTRH-FSSEPVTPTQTRPNDPDPIALALSSELLRDPDSDPHSVSQHLHLSFSH 370
            F+ P   +  H FSSE V       N  D  + +L+SELL+DPDSDP  ++Q L LSFSH
Sbjct: 54   FSSPLYLSLSHSFSSESVN------NHVDQTSQSLASELLKDPDSDPLPITQRLQLSFSH 107

Query: 371  ITPTPDLVLQTLNLSTEAGRSVLGFHQWLASNPKFTHTDDTLSYFVDYFGRRKDFKATHE 550
            + P P+LV  TLNLS+EAGR+VLGF++WL SNP F HTD+T+SYFVD+FGRRKDF A  E
Sbjct: 108  VKPNPELVRNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDFFGRRKDFNAVQE 167

Query: 551  VLAAAAGGRAGEKTLVSAIDRLVRAGRPNRAVQFFDRMENDYGLKRDRNSLKVIVEKLCM 730
            VLA   G   G KTL S+I R  RAGRP + + FF+ ME +YGLKRD+ SL+++VEKLC 
Sbjct: 168  VLAKGLGIN-GPKTLKSSIHRFARAGRPTKLISFFETMETNYGLKRDKESLRMVVEKLCE 226

Query: 731  NGFASYAEKMVKDHAKEFFPDEATCNLLITGWCVDGKLEEARRLAGEMYRGGFEPGVGAY 910
            NGF S+AEKMVKD A EFFPDEA C+ LI GWCV+ KL+EA+RLAGEMYRGGFE G  AY
Sbjct: 227  NGFGSHAEKMVKDLANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAY 286

Query: 911  NAMLDCVCKLCRQKDPFRLQSEAEKVLVEMDYHGVPRNVETFNVLITNLCKIRKNGDALG 1090
            NA+LDCVCKLCR+KDPFRL SEAE++LVEMD  GVPRNVETFNVLI NLCKIR+  DA+ 
Sbjct: 287  NALLDCVCKLCRKKDPFRLDSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRTTDAVN 346

Query: 1091 LFHRMGEWGCQPNETTFLVLIRSLYQAARLEDGDEMIERMKWYGHGSSLDKKAYYKLITI 1270
            LFHRMGEWGC PN  TFL+LIRSLYQAAR  +GDEMI+RMK  G+G +LDKKAYY+ + I
Sbjct: 347  LFHRMGEWGCHPNAETFLILIRSLYQAARTGEGDEMIDRMKSVGYGDALDKKAYYEFMNI 406

Query: 1271 LCGIERIDHALKVFAMMKADGCEPGVKTYELLMSKLGAHNRVGKVNALFNEARGRGLAVA 1450
            LCGIERIDHAL VFA MK DGCEPG+KTY+LLM KL AHNR+ K N+LFNEA+ RG+ V 
Sbjct: 407  LCGIERIDHALVVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRGVPVT 466

Query: 1451 QKEYAVDPRYXXXXXXXXXXXXXXTLPEKMARKKRRLQQIRLSFVRKPRQGGRR 1612
             K Y VDP+Y              TLPEKMARK+RRL+QIRLSFV+KPR+G RR
Sbjct: 467  PKAYQVDPKYVKKPKDKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPRRGMRR 520