BLASTX nr result

ID: Glycyrrhiza24_contig00006264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006264
         (1049 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550520.1| PREDICTED: putative E3 ubiquitin-protein lig...   398   e-108
ref|XP_003528662.1| PREDICTED: putative E3 ubiquitin-protein lig...   385   e-105
ref|XP_003546114.1| PREDICTED: putative E3 ubiquitin-protein lig...   368   1e-99
ref|XP_003542905.1| PREDICTED: putative E3 ubiquitin-protein lig...   359   5e-97
ref|XP_003594059.1| Baculoviral IAP repeat-containing protein [M...   342   1e-91

>ref|XP_003550520.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like [Glycine
            max]
          Length = 877

 Score =  398 bits (1023), Expect = e-108
 Identities = 224/354 (63%), Positives = 253/354 (71%), Gaps = 5/354 (1%)
 Frame = -2

Query: 1048 NVSHACAMDCDPSSSLGSDGTAD-GRPSQAESQSKVEGKVPKLSLPSPCKSIPAGSYNSQ 872
            NVSHACAMDC+P SSLG+D T   G  SQAE QSK E K P+LSL SP KSIPAGS+ SQ
Sbjct: 225  NVSHACAMDCNPLSSLGNDNTTSAGSSSQAEPQSKAETKCPELSLLSPSKSIPAGSHYSQ 284

Query: 871  SKKPLVTGIPGVSNPKKSQINAGFTENEGAKCGPNCADKAFSTAGTSQSSLVEEKCGSAR 692
            SKKP VTGIP V+N   SQI  G +E EGA CG  C +KAFS AGTSQS L+EEK G+ R
Sbjct: 285  SKKPFVTGIPVVNN-LNSQIIGGTSEKEGASCGSECINKAFSAAGTSQSGLMEEKRGTVR 343

Query: 691  KIHSSSTRRDYFLRQKSFHVEKSYRTYXXXXXXXXXXXXXXXXXXXXXXXXSVSEYSTIN 512
            K+HS ST RDY LR KSFHVEK +RTY                        SVSE STIN
Sbjct: 344  KVHSGSTMRDYVLRHKSFHVEKKFRTYELKGSSRGGKVNGLSGLVLDKKLKSVSESSTIN 403

Query: 511  LKNASLQISKAMGVDMTQDNLNANFSSSAGSMTHTAFS-MDSADALPGSTNTSYAVYAAN 335
            LK+ASLQISKAMG+D TQDN+N NFSS+AG+ T TAFS +DS++A+  STNTS+A+ AA+
Sbjct: 404  LKSASLQISKAMGIDTTQDNINVNFSSNAGTSTSTAFSPVDSSNAVCRSTNTSFAINAAH 463

Query: 334  TLPAFSSPXXXXXXXXXXXXXXXXXXXXSTEPVCCNNEAHNS-YMGIPYD--KSLGQWIP 164
            T+P FS P                    STE VC NNEA NS YMGIPY+  KS  QWIP
Sbjct: 464  TIPLFSCPASLSATNTDLSLSLSSKIKPSTESVCSNNEAPNSSYMGIPYNNIKSPRQWIP 523

Query: 163  QDGKDEMILKLVPRVRELKNQLQEWTEWANQKVMQAARRLSKDKAELQTLRQEK 2
            QDGKDEM+LKL PRV+EL+NQLQEWTEWANQKVMQAA RLSK+KAELQTLRQEK
Sbjct: 524  QDGKDEMLLKLFPRVQELQNQLQEWTEWANQKVMQAACRLSKEKAELQTLRQEK 577


>ref|XP_003528662.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like [Glycine
            max]
          Length = 890

 Score =  385 bits (989), Expect = e-105
 Identities = 215/356 (60%), Positives = 250/356 (70%), Gaps = 7/356 (1%)
 Frame = -2

Query: 1048 NVSHACAMDCDPSSSLGSDGTADGRPSQAESQSKVEGKVPKLSLPSPCKSIPAGSYNSQS 869
            NVSHACAMDC+P SSLG+D +  G  +QAES SK E K P+ SL SP KSIP  S+NSQS
Sbjct: 236  NVSHACAMDCNPLSSLGNDNSTGGPSNQAESLSKAETKCPEPSLISPSKSIPTCSHNSQS 295

Query: 868  KKPLVTGIPGVSNPKKSQINAGFTENEGAKCGPNCADKAFSTAGTSQSSLVEEKCGSARK 689
            KKP VT IPGV+N    QI  G +E EGA CG  C +KAFS AGTSQS L++EK G+ RK
Sbjct: 296  KKPFVTRIPGVNN-LNPQIIGGASEKEGASCGSECINKAFSAAGTSQSGLMKEKRGTVRK 354

Query: 688  IHSSSTRRDYFLRQKSFHVEKSYRTYXXXXXXXXXXXXXXXXXXXXXXXXSVSEYSTINL 509
            +HS ST+RDY L+ KSFH EKSYRTY                        SVSE STINL
Sbjct: 355  VHSGSTKRDYILQHKSFHKEKSYRTYGLKGSSRRGKVNGLSGLVLDKKLKSVSESSTINL 414

Query: 508  KNASLQISKAMGVDMTQDNLNANFSSSAGSMTHTAFSM-DSADALPGSTNTSYAVYAANT 332
            K+ASLQISKA+G+D TQD+++ NFS +AG+ T TAFS+ +S+D++  STNTS+A+ AANT
Sbjct: 415  KSASLQISKAVGIDTTQDSISVNFSCNAGTSTSTAFSLVNSSDSVCRSTNTSFAINAANT 474

Query: 331  LPAFSSPXXXXXXXXXXXXXXXXXXXXSTEPVCCNNEAHNS-YMGIPYD-----KSLGQW 170
            +P FS P                    STE VC NNEA NS YMGI Y+     KS  QW
Sbjct: 475  IPVFSCPASLSATNTDLSLSLSSKIKPSTESVCSNNEAPNSSYMGILYNNNNNNKSPRQW 534

Query: 169  IPQDGKDEMILKLVPRVRELKNQLQEWTEWANQKVMQAARRLSKDKAELQTLRQEK 2
            IP DGKDEMILKL+PRVREL+NQLQEWTEWANQKVMQAARRLSK+KAELQTLRQEK
Sbjct: 535  IPHDGKDEMILKLLPRVRELQNQLQEWTEWANQKVMQAARRLSKEKAELQTLRQEK 590


>ref|XP_003546114.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like [Glycine
            max]
          Length = 855

 Score =  368 bits (945), Expect = 1e-99
 Identities = 210/351 (59%), Positives = 241/351 (68%), Gaps = 2/351 (0%)
 Frame = -2

Query: 1048 NVSHACAMDCDPSSSLGSDGTADGRPS-QAESQSKVEGKVPKLSLPSPCKSIPAGSYNSQ 872
            NVS ACAMD DPSSSLGSDG ADG  S Q ESQSK+E K P+LSLPSPCKS+ +GS   Q
Sbjct: 237  NVSLACAMDGDPSSSLGSDGIADGCSSVQTESQSKLETKGPELSLPSPCKSVSSGS---Q 293

Query: 871  SKKPLVTGIPGVSNPKKSQINAGFTENEGAKCGPNCADKAFSTAGTSQSSLVEEKCGSAR 692
             KK  V G  G+   K SQI  G +E E A  G +  DK+ ST+GTSQS LVEEKCG+ R
Sbjct: 294  PKKSSVEGNTGLDKSKNSQILVGPSEKEAANSGRDSIDKSSSTSGTSQSPLVEEKCGNIR 353

Query: 691  KIHSSSTRRDYFLRQKSFHVEKSYRTYXXXXXXXXXXXXXXXXXXXXXXXXSVSEYSTIN 512
            K+HSSST+RDY LRQKSFH+EK YRTY                        SVSE +TIN
Sbjct: 354  KVHSSSTKRDYILRQKSFHMEKGYRTYGSKGSSRGGRLNGLNGLILDKKLKSVSEPTTIN 413

Query: 511  LKNASLQISKAMGVDMTQDNLNANFSSSAGSMTHTAFSMDSADALPGSTNTSYAVYAANT 332
            LK+AS+ ISKAMGVD+TQDNLNA+FSS+ G  T TAFS+DS   +  STNT  +V+  N 
Sbjct: 414  LKSASINISKAMGVDVTQDNLNADFSSNDGPSTPTAFSLDSTVTVSRSTNTLSSVHDGN- 472

Query: 331  LPAFSSPXXXXXXXXXXXXXXXXXXXXSTEPVCCNNEAHNSY-MGIPYDKSLGQWIPQDG 155
            +PA  S                      T PVCCNN+  NS  MGI +D+SLG+WIPQD 
Sbjct: 473  IPAVGSSNVLSATDTNLSLSLSSNSKSPTTPVCCNNKPPNSSCMGILHDRSLGKWIPQDR 532

Query: 154  KDEMILKLVPRVRELKNQLQEWTEWANQKVMQAARRLSKDKAELQTLRQEK 2
            KDEMILKLVPRV+EL+NQLQEWTEWANQKVMQAARRL KDKAEL+TLRQEK
Sbjct: 533  KDEMILKLVPRVQELQNQLQEWTEWANQKVMQAARRLCKDKAELKTLRQEK 583


>ref|XP_003542905.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like [Glycine
            max]
          Length = 883

 Score =  359 bits (922), Expect = 5e-97
 Identities = 208/351 (59%), Positives = 237/351 (67%), Gaps = 2/351 (0%)
 Frame = -2

Query: 1048 NVSHACAMDCDPSSSLGSDGTADGRPS-QAESQSKVEGKVPKLSLPSPCKSIPAGSYNSQ 872
            NVS ACAMD DPSSSLGSDG  DG  S Q E Q K+E K P+LS   PCKSI +GS   Q
Sbjct: 237  NVSLACAMDDDPSSSLGSDGIDDGCSSVQTEPQLKLETKGPELS---PCKSISSGS---Q 290

Query: 871  SKKPLVTGIPGVSNPKKSQINAGFTENEGAKCGPNCADKAFSTAGTSQSSLVEEKCGSAR 692
             +K  V G  G+   KKSQI  G +  E A  G    DK+ ST+GTSQS LVEEKCGS R
Sbjct: 291  PEKSSVAGNTGLDKSKKSQILVGPSGKEAANSGCEFIDKSSSTSGTSQSPLVEEKCGSVR 350

Query: 691  KIHSSSTRRDYFLRQKSFHVEKSYRTYXXXXXXXXXXXXXXXXXXXXXXXXSVSEYSTIN 512
            K+HSSS +RDY LRQKSFH+EKSYRTY                        SVSE +TIN
Sbjct: 351  KVHSSSNKRDYILRQKSFHMEKSYRTYGPKGSSRGGRLNGLNGLILDKKLKSVSESTTIN 410

Query: 511  LKNASLQISKAMGVDMTQDNLNANFSSSAGSMTHTAFSMDSADALPGSTNTSYAVYAANT 332
            LK+AS+ ISKA+GVD+TQDNLNA+FSS+ G  T TAFS+DS   +  STNT  +V+ AN 
Sbjct: 411  LKSASINISKAVGVDVTQDNLNADFSSNDGPSTPTAFSLDSTVTVSQSTNTLSSVHEANA 470

Query: 331  LPAFSSPXXXXXXXXXXXXXXXXXXXXSTEPVCCNNEAHNSY-MGIPYDKSLGQWIPQDG 155
            +PA  SP                     T  V CNNEA NS  MGIP+D+SLG+WIPQD 
Sbjct: 471  IPAVGSPNVLSATDTDLSLSLSSNSKSPTTTVRCNNEAPNSSCMGIPHDRSLGKWIPQDR 530

Query: 154  KDEMILKLVPRVRELKNQLQEWTEWANQKVMQAARRLSKDKAELQTLRQEK 2
            KDEMILKLVPRVREL+NQLQEWTEWANQKVMQAARRLSKD+AEL+TLRQEK
Sbjct: 531  KDEMILKLVPRVRELQNQLQEWTEWANQKVMQAARRLSKDRAELKTLRQEK 581


>ref|XP_003594059.1| Baculoviral IAP repeat-containing protein [Medicago truncatula]
            gi|355483107|gb|AES64310.1| Baculoviral IAP
            repeat-containing protein [Medicago truncatula]
          Length = 929

 Score =  342 bits (876), Expect = 1e-91
 Identities = 192/352 (54%), Positives = 238/352 (67%), Gaps = 3/352 (0%)
 Frame = -2

Query: 1048 NVSHACAMDCDPSSSLGSDGTADGRPS-QAESQSKVEGKVPKLSLPSPCKSIPAGSYNSQ 872
            NVSHACAMD DP SSLGSDG  DG  S Q ESQSKVE K  +LSLPSPC SIP G+   Q
Sbjct: 226  NVSHACAMDGDPLSSLGSDGIGDGSSSVQTESQSKVETKSSELSLPSPCNSIPPGT---Q 282

Query: 871  SKKPLVTGIPGVSNPKKSQINAGFTENEGAKCGPNCADKAFSTAGTSQSSLVEEKCGSAR 692
            S+K +V         + SQI  G  E +GA  G +  DK+ S +GTSQS L++EKCG  R
Sbjct: 283  SEKSVVA--------ENSQIRGGLLEKQGANSGCHPVDKSSSASGTSQSPLLQEKCGIVR 334

Query: 691  KIHSSSTRRDYFLRQKSFHVEKSYRTYXXXXXXXXXXXXXXXXXXXXXXXXSVSEYSTIN 512
            K+HSSST+R+Y  RQKS HVEKSYRTY                        SVSE + IN
Sbjct: 335  KVHSSSTKREYIFRQKSIHVEKSYRTYGSKGSSRGGKLSGLSGLILDKKLKSVSESTAIN 394

Query: 511  LKNASLQISKAMGVDMTQDNLNANFSSSAGSMTHTAFSMDSADALPGSTNTSYAVYAANT 332
            LK+AS+ ISKA+G+D+TQ+N N +FSS+ G  T T FS+DS+D +  + ++S + + AN 
Sbjct: 395  LKSASINISKAVGIDVTQNNHNTHFSSNNGPSTPT-FSLDSSDTISRAADSSSSEHEANL 453

Query: 331  LPAFSSPXXXXXXXXXXXXXXXXXXXXST-EPVCCNNEAHNSY-MGIPYDKSLGQWIPQD 158
            +PA SSP                    S+  P+CC+N++H+S  +GIPYDKS+ QW+PQD
Sbjct: 454  IPAVSSPPDALSATDTDLSLSLSSKGNSSIAPICCSNKSHSSSCVGIPYDKSMRQWLPQD 513

Query: 157  GKDEMILKLVPRVRELKNQLQEWTEWANQKVMQAARRLSKDKAELQTLRQEK 2
             KDE+ILK+VPRVREL+N+LQEWTEWANQKVMQAARRLSKDKAEL+TLRQEK
Sbjct: 514  RKDELILKMVPRVRELQNELQEWTEWANQKVMQAARRLSKDKAELKTLRQEK 565


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