BLASTX nr result

ID: Glycyrrhiza24_contig00006184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006184
         (1037 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK46045.1| unknown [Lotus japonicus]                              264   2e-68
ref|NP_001240103.1| uncharacterized protein LOC100796504 [Glycin...   264   3e-68
ref|XP_003535970.1| PREDICTED: transcription initiation factor T...   262   9e-68
ref|XP_003591431.1| Transcription initiation factor TFIID subuni...   247   4e-63
ref|XP_004136001.1| PREDICTED: transcription initiation factor T...   218   1e-54

>gb|AFK46045.1| unknown [Lotus japonicus]
          Length = 136

 Score =  264 bits (675), Expect = 2e-68
 Identities = 133/136 (97%), Positives = 135/136 (99%)
 Frame = -3

Query: 714 MSNSSAGTSSKPRAASSQPSETSSKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEDIV 535
           MSNS+AGTSSKPRAASSQPSETSSKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEDIV
Sbjct: 1   MSNSTAGTSSKPRAASSQPSETSSKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEDIV 60

Query: 534 VEYVTELVHKAQDIGSQRGKLSVEDFLYLIRKDLPKLNRCTELLSMNEELKQARKVFESD 355
           +EYVTELVHKAQDIGSQRGKLSVEDFLYLIRKD PKLNRCTELLSMNEELKQARKVFESD
Sbjct: 61  IEYVTELVHKAQDIGSQRGKLSVEDFLYLIRKDFPKLNRCTELLSMNEELKQARKVFESD 120

Query: 354 EEKLRKVFEVDESVEG 307
           EEKLRKVFEVDESVEG
Sbjct: 121 EEKLRKVFEVDESVEG 136


>ref|NP_001240103.1| uncharacterized protein LOC100796504 [Glycine max]
           gi|255629011|gb|ACU14850.1| unknown [Glycine max]
          Length = 136

 Score =  264 bits (674), Expect = 3e-68
 Identities = 134/136 (98%), Positives = 135/136 (99%)
 Frame = -3

Query: 714 MSNSSAGTSSKPRAASSQPSETSSKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEDIV 535
           MSNSSAGTSSKPRAASSQPSETSSKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEDIV
Sbjct: 1   MSNSSAGTSSKPRAASSQPSETSSKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEDIV 60

Query: 534 VEYVTELVHKAQDIGSQRGKLSVEDFLYLIRKDLPKLNRCTELLSMNEELKQARKVFESD 355
           VEYVTELVHKAQDIGSQRGKLSVEDFLYLIRKD PKLNRCTELLSMNEELKQARKVFESD
Sbjct: 61  VEYVTELVHKAQDIGSQRGKLSVEDFLYLIRKDSPKLNRCTELLSMNEELKQARKVFESD 120

Query: 354 EEKLRKVFEVDESVEG 307
           EEKLRKVFEVD+SVEG
Sbjct: 121 EEKLRKVFEVDDSVEG 136


>ref|XP_003535970.1| PREDICTED: transcription initiation factor TFIID subunit 13-like
           [Glycine max]
          Length = 136

 Score =  262 bits (670), Expect = 9e-68
 Identities = 133/136 (97%), Positives = 134/136 (98%)
 Frame = -3

Query: 714 MSNSSAGTSSKPRAASSQPSETSSKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEDIV 535
           MSNSSAGTSSKPR ASSQPSETSSKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEDIV
Sbjct: 1   MSNSSAGTSSKPRTASSQPSETSSKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEDIV 60

Query: 534 VEYVTELVHKAQDIGSQRGKLSVEDFLYLIRKDLPKLNRCTELLSMNEELKQARKVFESD 355
           VEYVTELVHKAQDIGSQRGKLSVEDFLYLIRKD PKLNRCTELLSMNEELKQARKVFESD
Sbjct: 61  VEYVTELVHKAQDIGSQRGKLSVEDFLYLIRKDSPKLNRCTELLSMNEELKQARKVFESD 120

Query: 354 EEKLRKVFEVDESVEG 307
           EEKLRKVFEVD+SVEG
Sbjct: 121 EEKLRKVFEVDDSVEG 136


>ref|XP_003591431.1| Transcription initiation factor TFIID subunit [Medicago truncatula]
           gi|217071536|gb|ACJ84128.1| unknown [Medicago
           truncatula] gi|355480479|gb|AES61682.1| Transcription
           initiation factor TFIID subunit [Medicago truncatula]
           gi|388501368|gb|AFK38750.1| unknown [Medicago
           truncatula]
          Length = 136

 Score =  247 bits (630), Expect = 4e-63
 Identities = 122/136 (89%), Positives = 130/136 (95%)
 Frame = -3

Query: 714 MSNSSAGTSSKPRAASSQPSETSSKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEDIV 535
           MSNS+AGTSSK RAASSQP +TSSKR+RGVFQ+ELQHMMYGFGDDPNPLPESVALM+DIV
Sbjct: 1   MSNSAAGTSSKQRAASSQPPDTSSKRRRGVFQRELQHMMYGFGDDPNPLPESVALMDDIV 60

Query: 534 VEYVTELVHKAQDIGSQRGKLSVEDFLYLIRKDLPKLNRCTELLSMNEELKQARKVFESD 355
           VEY+TELVHKAQDIGSQRGKLSVEDFLYLIRKD+PKLNRCTELLSMNEELKQARK+FE D
Sbjct: 61  VEYITELVHKAQDIGSQRGKLSVEDFLYLIRKDMPKLNRCTELLSMNEELKQARKLFEHD 120

Query: 354 EEKLRKVFEVDESVEG 307
           EE LRKVFEVDE  EG
Sbjct: 121 EENLRKVFEVDEPAEG 136


>ref|XP_004136001.1| PREDICTED: transcription initiation factor TFIID subunit 13-like
           isoform 1 [Cucumis sativus]
           gi|449436443|ref|XP_004136002.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           isoform 2 [Cucumis sativus]
           gi|449507844|ref|XP_004163145.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           isoform 1 [Cucumis sativus]
           gi|449507847|ref|XP_004163146.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           isoform 2 [Cucumis sativus]
          Length = 135

 Score =  218 bits (556), Expect = 1e-54
 Identities = 109/135 (80%), Positives = 122/135 (90%)
 Frame = -3

Query: 714 MSNSSAGTSSKPRAASSQPSETSSKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEDIV 535
           M+NSSAG SSK R  SSQPSETS KRKRGVFQKELQHMMYGFGDDPNPLPESVALMEDIV
Sbjct: 1   MNNSSAGPSSKQRTGSSQPSETSFKRKRGVFQKELQHMMYGFGDDPNPLPESVALMEDIV 60

Query: 534 VEYVTELVHKAQDIGSQRGKLSVEDFLYLIRKDLPKLNRCTELLSMNEELKQARKVFESD 355
           VEY+TELV+KAQ+IGS+RGKLSVEDFLYL+RKD  KLNR TELLSMNEELKQAR+ FE D
Sbjct: 61  VEYITELVYKAQEIGSKRGKLSVEDFLYLMRKDPRKLNRSTELLSMNEELKQARRAFEID 120

Query: 354 EEKLRKVFEVDESVE 310
           E+KL+K FE ++ ++
Sbjct: 121 EDKLKKAFEEEDKMD 135


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