BLASTX nr result

ID: Glycyrrhiza24_contig00006179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006179
         (1004 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK46934.1| unknown [Lotus japonicus]                              202   1e-49
gb|AFK41643.1| unknown [Lotus japonicus]                              202   1e-49
ref|NP_001236243.1| uncharacterized protein LOC100306266 [Glycin...   192   8e-47
ref|XP_003620792.1| 30S ribosomal protein [Medicago truncatula] ...   191   3e-46
ref|XP_004145640.1| PREDICTED: 30S ribosomal protein 3, chloropl...   183   6e-44

>gb|AFK46934.1| unknown [Lotus japonicus]
          Length = 175

 Score =  202 bits (513), Expect = 1e-49
 Identities = 102/137 (74%), Positives = 108/137 (78%), Gaps = 1/137 (0%)
 Frame = -1

Query: 683 SHSHVPLLPSTRSRFRLSASAAVAEDATXXXXXXXXXXXXXXQ-KLGVVVKPTEKARLVL 507
           SHSH  L PS  SRFRL+ SAA    A                 KLGVVVKPT+K RLVL
Sbjct: 39  SHSHSHLCPSNPSRFRLAVSAAETPSAAVAVAEQDDTSLSPPPQKLGVVVKPTDKPRLVL 98

Query: 506 KFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKDLLETKPWISQKQMIILLN 327
           KFIWMEKNIGIALDQ +PGHGTIPLSPYYFWPRKDAWEELK+LLE+KPWISQKQMIILLN
Sbjct: 99  KFIWMEKNIGIALDQAVPGHGTIPLSPYYFWPRKDAWEELKELLESKPWISQKQMIILLN 158

Query: 326 QATDIINLWQQSGGNLN 276
           QATDIINLWQQSGGNL+
Sbjct: 159 QATDIINLWQQSGGNLS 175


>gb|AFK41643.1| unknown [Lotus japonicus]
          Length = 175

 Score =  202 bits (513), Expect = 1e-49
 Identities = 102/137 (74%), Positives = 108/137 (78%), Gaps = 1/137 (0%)
 Frame = -1

Query: 683 SHSHVPLLPSTRSRFRLSASAAVAEDATXXXXXXXXXXXXXXQ-KLGVVVKPTEKARLVL 507
           SHSH  L PS  SRFRL+ SAA    A                 KLGVVVKPT+K RLVL
Sbjct: 39  SHSHSHLCPSNPSRFRLAVSAAETPSAAVAVAEQDDTSLSPPPQKLGVVVKPTDKPRLVL 98

Query: 506 KFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKDLLETKPWISQKQMIILLN 327
           KFIWMEKNIGIALDQ +PGHGTIPLSPYYFWPRKDAWEELK+LLE+KPWISQKQMIILLN
Sbjct: 99  KFIWMEKNIGIALDQAVPGHGTIPLSPYYFWPRKDAWEELKELLESKPWISQKQMIILLN 158

Query: 326 QATDIINLWQQSGGNLN 276
           QATDIINLWQQSGGNL+
Sbjct: 159 QATDIINLWQQSGGNLS 175


>ref|NP_001236243.1| uncharacterized protein LOC100306266 [Glycine max]
           gi|255628049|gb|ACU14369.1| unknown [Glycine max]
          Length = 158

 Score =  192 bits (489), Expect = 8e-47
 Identities = 101/136 (74%), Positives = 106/136 (77%)
 Frame = -1

Query: 683 SHSHVPLLPSTRSRFRLSASAAVAEDATXXXXXXXXXXXXXXQKLGVVVKPTEKARLVLK 504
           S SHVP    T +RF LS SAA                    +KLGVVVKPTEK RLVLK
Sbjct: 32  SLSHVP--SPTPTRFSLSVSAAETT-------AFAAPPTPQPEKLGVVVKPTEKPRLVLK 82

Query: 503 FIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKDLLETKPWISQKQMIILLNQ 324
           FIWMEKNIGIALDQM+PGHGTIPLSPYYFWPRKDAWEELK+LLE KPWISQKQMIILLNQ
Sbjct: 83  FIWMEKNIGIALDQMVPGHGTIPLSPYYFWPRKDAWEELKELLENKPWISQKQMIILLNQ 142

Query: 323 ATDIINLWQQSGGNLN 276
           ATDIINLWQQSGGNL+
Sbjct: 143 ATDIINLWQQSGGNLS 158


>ref|XP_003620792.1| 30S ribosomal protein [Medicago truncatula]
           gi|217075300|gb|ACJ86010.1| unknown [Medicago
           truncatula] gi|355495807|gb|AES77010.1| 30S ribosomal
           protein [Medicago truncatula]
           gi|388491518|gb|AFK33825.1| unknown [Medicago
           truncatula]
          Length = 161

 Score =  191 bits (484), Expect = 3e-46
 Identities = 95/121 (78%), Positives = 100/121 (82%)
 Frame = -1

Query: 638 RLSASAAVAEDATXXXXXXXXXXXXXXQKLGVVVKPTEKARLVLKFIWMEKNIGIALDQM 459
           R + SA VAEDA                KLGVVVKPT+K RLVLKFIWMEKNIGI LDQM
Sbjct: 44  RFTVSAVVAEDAAAVSLQPPPQSQ----KLGVVVKPTDKPRLVLKFIWMEKNIGIGLDQM 99

Query: 458 IPGHGTIPLSPYYFWPRKDAWEELKDLLETKPWISQKQMIILLNQATDIINLWQQSGGNL 279
           IPGHGTIPLSPYYFWPRKDAWEELK+LLE+KPWISQKQMIILLNQATDIINLWQQSGGNL
Sbjct: 100 IPGHGTIPLSPYYFWPRKDAWEELKELLESKPWISQKQMIILLNQATDIINLWQQSGGNL 159

Query: 278 N 276
           +
Sbjct: 160 S 160


>ref|XP_004145640.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Cucumis
           sativus] gi|449484535|ref|XP_004156909.1| PREDICTED: 30S
           ribosomal protein 3, chloroplastic-like [Cucumis
           sativus]
          Length = 192

 Score =  183 bits (464), Expect = 6e-44
 Identities = 87/92 (94%), Positives = 88/92 (95%)
 Frame = -1

Query: 554 KLGVVVKPTEKARLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKDLL 375
           KLGVVVKP EK RLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELK LL
Sbjct: 100 KLGVVVKPMEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLL 159

Query: 374 ETKPWISQKQMIILLNQATDIINLWQQSGGNL 279
           E+KPWISQKQMIILLNQATDIINLWQQ GGNL
Sbjct: 160 ESKPWISQKQMIILLNQATDIINLWQQGGGNL 191


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