BLASTX nr result

ID: Glycyrrhiza24_contig00006123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006123
         (1757 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606705.1| RING finger protein [Medicago truncatula] gi...   443   e-122
ref|XP_003539637.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   441   e-121
ref|XP_003537982.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   439   e-120
ref|XP_003597390.1| RING finger protein [Medicago truncatula] gi...   369   2e-99
ref|XP_004143127.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   347   8e-93

>ref|XP_003606705.1| RING finger protein [Medicago truncatula] gi|355507760|gb|AES88902.1|
            RING finger protein [Medicago truncatula]
          Length = 369

 Score =  443 bits (1140), Expect = e-122
 Identities = 226/326 (69%), Positives = 244/326 (74%), Gaps = 7/326 (2%)
 Frame = -2

Query: 1705 MNSDTQSGTASYWCYSCNRFVHLLEHGNIVCPHCESGFVEEIHADPSPQHRLSPFPDDPI 1526
            MNS++   T SYWCYSC RF++L +H  IVCPHC++GFVEEI A  SP HRLSPFP D +
Sbjct: 1    MNSESSPETPSYWCYSCTRFINLSDHTLIVCPHCDNGFVEEIAAGESPHHRLSPFPADTV 60

Query: 1525 XXXXXXXXXXXXXXXXXSPFNPVIVLRXXXXXXXXXXXXXA----FELFYDDGDGSGLRP 1358
                             SPFNPVIVLR             A    FELFYDDGDGSGLRP
Sbjct: 61   SSRRQGFRRRRRDAGSRSPFNPVIVLRGAGDDGVGEDGAGAGGSAFELFYDDGDGSGLRP 120

Query: 1357 LPPTVSEFLLGSGFDRLLEQFSQIELNGFGRPENPPASKAAIESMPTVEIGEAQVGADEH 1178
            LPPTVSEFLLGSGFDRLLEQFSQIE+NGFGRPENPPASKAAIESMPTVEI E  V  + H
Sbjct: 121  LPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICEEHVSCELH 180

Query: 1177 CAVCKEAFEMGVEARELPCKHIYHSDCILPWLSVRNSCPVCRHELPSD-HSPLENRVSGQ 1001
            CAVCKE FE+  EARELPCKH+YHSDCILPWL+VRNSCPVCRHELPSD ++PLE RVSGQ
Sbjct: 181  CAVCKEEFELHAEARELPCKHLYHSDCILPWLTVRNSCPVCRHELPSDLNNPLETRVSGQ 240

Query: 1000 IDEEAIGLTIWRLPXXXXXXXXXXXXXXXGESHFPVVYTEMDGGLNA--NGAPRRITRTV 827
            IDEEAIGLTIWRLP               GESHFPVVYTEMDGGLNA    APRRI+RTV
Sbjct: 241  IDEEAIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMDGGLNAAQGSAPRRISRTV 300

Query: 826  RSHRVRESRGFGRVFRNVLSFFGRLG 749
            R+HRVRES G GRVFRN  SFFGR+G
Sbjct: 301  RAHRVRESHGIGRVFRNFFSFFGRIG 326


>ref|XP_003539637.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 361

 Score =  441 bits (1134), Expect = e-121
 Identities = 226/325 (69%), Positives = 242/325 (74%), Gaps = 6/325 (1%)
 Frame = -2

Query: 1705 MNSDTQSGTASYWCYSCNRFVHLLEHGNIVCPHCESGFVEEIHA--DPSPQHRLSPFPDD 1532
            MN DTQ GT SYWCYSC RFVHL     I CPHC+SGFVEEI A  + SP+HRLSPFPDD
Sbjct: 1    MNLDTQPGTPSYWCYSCTRFVHLSVQATIACPHCQSGFVEEIRAGAEASPRHRLSPFPDD 60

Query: 1531 PIXXXXXXXXXXXXXXXXXS-PFNPVIVLRXXXXXXXXXXXXXA--FELFYDDGDGSGLR 1361
            P+                   PFNPVIVLR             A  FELFYDDGDG+GLR
Sbjct: 61   PLSFRRQGFRRRRREGAGNRSPFNPVIVLRGPGDDSAAADHDGASTFELFYDDGDGTGLR 120

Query: 1360 PLPPTVSEFLLGSGFDRLLEQFSQIELNGFGRPENPPASKAAIESMPTVEIGEAQVGADE 1181
            PLPPT+SEFLLGSGFDRLLEQF+Q+E+NGFGRPENPP SKAAIESMPTVEIGE  V  D 
Sbjct: 121  PLPPTMSEFLLGSGFDRLLEQFAQMEMNGFGRPENPPTSKAAIESMPTVEIGETHVETDA 180

Query: 1180 HCAVCKEAFEMGVEARELPCKHIYHSDCILPWLSVRNSCPVCRHELPSDHSPLENRVSGQ 1001
            HCAVCKE FE+  EARELPCKHIYHS+CILPWLS+RNSCPVCRHELPSD   LE RV  Q
Sbjct: 181  HCAVCKEVFELHAEARELPCKHIYHSECILPWLSMRNSCPVCRHELPSD---LETRVPSQ 237

Query: 1000 IDEEAIGLTIWRLPXXXXXXXXXXXXXXXGESHFPVVYTEMDGGLNAN-GAPRRITRTVR 824
            IDEEAIGLTIWRLP               GESH PVVYTEMDGGLN N GAPRRI+R+VR
Sbjct: 238  IDEEAIGLTIWRLPGGGFAVGRFSGGRRTGESHLPVVYTEMDGGLNTNGGAPRRISRSVR 297

Query: 823  SHRVRESRGFGRVFRNVLSFFGRLG 749
            S+RVRESRGFGRVFRN  SFFGR+G
Sbjct: 298  SNRVRESRGFGRVFRNFFSFFGRIG 322


>ref|XP_003537982.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 361

 Score =  439 bits (1128), Expect = e-120
 Identities = 225/327 (68%), Positives = 241/327 (73%), Gaps = 8/327 (2%)
 Frame = -2

Query: 1705 MNSDTQSGTASYWCYSCNRFVHLLEHGNIVCPHCESGFVEEIHA----DPSPQHRLSPFP 1538
            MN +TQ GTASYWCYSC RFVHL     I CPHC+SGFVEEI A    + SP+HRLSPFP
Sbjct: 1    MNLETQPGTASYWCYSCTRFVHLSVQSTIACPHCQSGFVEEIRAGAGAEASPRHRLSPFP 60

Query: 1537 DDPIXXXXXXXXXXXXXXXXXS-PFNPVIVLRXXXXXXXXXXXXXA--FELFYDDGDGSG 1367
            DDP+                   PFNPVIVLR                FELFYDDGDG+G
Sbjct: 61   DDPLLLRRQGFRRRRREASGNRSPFNPVIVLRGPGDDSAAADHDGVSTFELFYDDGDGTG 120

Query: 1366 LRPLPPTVSEFLLGSGFDRLLEQFSQIELNGFGRPENPPASKAAIESMPTVEIGEAQVGA 1187
            LRPLPPT+SE LLGSGFDRLLEQF+QIE+NGFGRPENPPASKAAIESMPTVEIGE  V  
Sbjct: 121  LRPLPPTMSELLLGSGFDRLLEQFAQIEMNGFGRPENPPASKAAIESMPTVEIGETHVET 180

Query: 1186 DEHCAVCKEAFEMGVEARELPCKHIYHSDCILPWLSVRNSCPVCRHELPSDHSPLENRVS 1007
            + HCAVCKEAFE+  EARELPCKHIYHSDCILPWLS+RNSCPVCRHELPSD   LE RV 
Sbjct: 181  EAHCAVCKEAFELHAEARELPCKHIYHSDCILPWLSMRNSCPVCRHELPSD---LETRVP 237

Query: 1006 GQIDEEAIGLTIWRLPXXXXXXXXXXXXXXXGESHFPVVYTEMDGGLNAN-GAPRRITRT 830
             QIDEE IGLTIWRLP               GESHFPVVYTEMDGGLN N GAPRRI+R+
Sbjct: 238  SQIDEETIGLTIWRLPGGGFAVGRFSGGRRTGESHFPVVYTEMDGGLNTNGGAPRRISRS 297

Query: 829  VRSHRVRESRGFGRVFRNVLSFFGRLG 749
            VRS+RVRESRGFGRV  N  SFFGR+G
Sbjct: 298  VRSNRVRESRGFGRVISNFFSFFGRIG 324


>ref|XP_003597390.1| RING finger protein [Medicago truncatula] gi|87241270|gb|ABD33128.1|
            Zinc finger, RING-type; Thioredoxin-related [Medicago
            truncatula] gi|355486438|gb|AES67641.1| RING finger
            protein [Medicago truncatula] gi|388498558|gb|AFK37345.1|
            unknown [Medicago truncatula]
          Length = 355

 Score =  369 bits (946), Expect = 2e-99
 Identities = 189/331 (57%), Positives = 227/331 (68%), Gaps = 12/331 (3%)
 Frame = -2

Query: 1708 NMNSDTQSGTASYWCYSCNRFVHLLEHGNIVCPHCESGFVEEIHADPSPQHRLSPFPDD- 1532
            N  ++T S T S+WCYSC RF+H+L   N+VCPHC++GFVEEIHA  SP   +S F D  
Sbjct: 2    NSETETPSSTTSFWCYSCTRFIHILNQNNVVCPHCQNGFVEEIHAGQSPA--VSLFADGI 59

Query: 1531 PIXXXXXXXXXXXXXXXXXSPFNPVIVLRXXXXXXXXXXXXXA-----------FELFYD 1385
                               SPFNPVIVLR             A           FEL+Y+
Sbjct: 60   QSSRRQTSRRRRRNAGGSRSPFNPVIVLRGPREDTTAGVGADAGGGDSEGNTSSFELYYE 119

Query: 1384 DGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIELNGFGRPENPPASKAAIESMPTVEIG 1205
            D +G+ LRPLPP++SE LLGSGFDRLLEQFSQIE+NGFGR ENPPASKAAIES+PTVEI 
Sbjct: 120  DSNGTDLRPLPPSMSELLLGSGFDRLLEQFSQIEINGFGRSENPPASKAAIESIPTVEIT 179

Query: 1204 EAQVGADEHCAVCKEAFEMGVEARELPCKHIYHSDCILPWLSVRNSCPVCRHELPSDHSP 1025
            ++++ ++ HCAVCKE FE+G EAR++PC H+YHSDCILPWLS+RNSCPVCRHELPSD + 
Sbjct: 180  DSEMESEIHCAVCKEQFELGSEARKMPCNHLYHSDCILPWLSMRNSCPVCRHELPSDQNA 239

Query: 1024 LENRVSGQIDEEAIGLTIWRLPXXXXXXXXXXXXXXXGESHFPVVYTEMDGGLNANGAPR 845
             E+R+SGQIDEEA+GLTIWRLP               GE   P+VYTEMDG  N+N   R
Sbjct: 240  SESRISGQIDEEAVGLTIWRLPGGGFAVGRFAGGRRAGEIQLPIVYTEMDGN-NSNEDSR 298

Query: 844  RITRTVRSHRVRESRGFGRVFRNVLSFFGRL 752
            RI+ TV S+RVRE RG  R+FRN LSFFG +
Sbjct: 299  RISLTVGSNRVRERRGIRRIFRNFLSFFGNV 329


>ref|XP_004143127.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
            gi|449527992|ref|XP_004170991.1| PREDICTED: E3
            ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 378

 Score =  347 bits (889), Expect = 8e-93
 Identities = 179/324 (55%), Positives = 209/324 (64%), Gaps = 13/324 (4%)
 Frame = -2

Query: 1687 SGTASYWCYSCNRFVHLLEHGNIVCPHCESGFVEEIHA----DPSPQHR-LSP-----FP 1538
            +GTASYWCY CNRFV      +I CP+C+ GFVE I       PS  HR LSP       
Sbjct: 3    TGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPPSNLHRRLSPSAIHTLD 62

Query: 1537 DDPIXXXXXXXXXXXXXXXXXSPFNPVIVLRXXXXXXXXXXXXXA--FELFYDDGDGSGL 1364
             D                   S FNPV+VLR                F+++YDDG GSGL
Sbjct: 63   QDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADAGDVVGGGERNSFDIYYDDGAGSGL 122

Query: 1363 RPLPPTVSEFLLGSGFDRLLEQFSQIELNGFGRPENPPASKAAIESMPTVEIGEAQVGAD 1184
            RP+P T+SEFL+G+GFDRLLEQ +Q+E+NGFGR ENPPASKAA+ESMPT+EI E+ V +D
Sbjct: 123  RPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHVDSD 182

Query: 1183 EHCAVCKEAFEMGVEARELPCKHIYHSDCILPWLSVRNSCPVCRHELPSDH-SPLENRVS 1007
             HCAVCKEAFE+G EARE+PCKHIYHS+CI+PWLS+RNSCPVCRHELPS+  SP      
Sbjct: 183  SHCAVCKEAFEIGTEAREMPCKHIYHSECIIPWLSMRNSCPVCRHELPSERVSPAGGVSD 242

Query: 1006 GQIDEEAIGLTIWRLPXXXXXXXXXXXXXXXGESHFPVVYTEMDGGLNANGAPRRITRTV 827
              +DEE +GLTIWRLP               GE   P VYTEMDGG N NG PRR++   
Sbjct: 243  RVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNGNGVPRRVSWAS 302

Query: 826  RSHRVRESRGFGRVFRNVLSFFGR 755
            R  R RESRG GR FRN+ SFFGR
Sbjct: 303  RRSRGRESRGIGRTFRNIFSFFGR 326


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