BLASTX nr result

ID: Glycyrrhiza24_contig00006120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006120
         (815 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536909.1| PREDICTED: protein TIME FOR COFFEE-like [Gly...   136   5e-30
ref|XP_003520207.1| PREDICTED: uncharacterized protein LOC100784...   134   2e-29
ref|XP_003590638.1| Protein TIME FOR COFFEE [Medicago truncatula...   122   1e-25
ref|XP_002302111.1| predicted protein [Populus trichocarpa] gi|2...    97   4e-18
ref|XP_002306776.1| predicted protein [Populus trichocarpa] gi|2...    85   2e-14

>ref|XP_003536909.1| PREDICTED: protein TIME FOR COFFEE-like [Glycine max]
          Length = 1203

 Score =  136 bits (343), Expect = 5e-30
 Identities = 76/113 (67%), Positives = 79/113 (69%)
 Frame = -2

Query: 814  TLKNFSQEKGRVSQGHMQISFGGNYITSXXXXXXXXXXXXXXXXLCTTAAGTPFDGDNLK 635
            TLK+FSQE+GRV  GHMQISFGGNYIT                  C TA GTP+ G N K
Sbjct: 1092 TLKSFSQEQGRVLPGHMQISFGGNYITPLPPQGQPLLNNNHPL--CATAQGTPYSGGNAK 1149

Query: 634  PNSEEKKVGSLVNASQSQQTENSSAGSSQKSSPVCRRNVPSILSSCPSHLSEL 476
             NSE  KV S VNASQ QQTENS AGS QKSSPVC RNVPSILSSCPSHLSEL
Sbjct: 1150 SNSEGSKVSSSVNASQLQQTENS-AGSGQKSSPVCGRNVPSILSSCPSHLSEL 1201


>ref|XP_003520207.1| PREDICTED: uncharacterized protein LOC100784698 [Glycine max]
          Length = 1214

 Score =  134 bits (337), Expect = 2e-29
 Identities = 75/113 (66%), Positives = 78/113 (69%)
 Frame = -2

Query: 814  TLKNFSQEKGRVSQGHMQISFGGNYITSXXXXXXXXXXXXXXXXLCTTAAGTPFDGDNLK 635
            TLK+FSQE+GRV  GHMQISFGGNYIT                  CTTA GTP+ G N K
Sbjct: 1103 TLKSFSQEQGRVLPGHMQISFGGNYITPLPPQGQPLLSNNQPL--CTTAQGTPYSGANAK 1160

Query: 634  PNSEEKKVGSLVNASQSQQTENSSAGSSQKSSPVCRRNVPSILSSCPSHLSEL 476
             N E  K  S VNASQ QQTENS AGS QKSSPVC RNVPSILSSCPSHLSEL
Sbjct: 1161 SNLEGSKASSSVNASQLQQTENS-AGSGQKSSPVCGRNVPSILSSCPSHLSEL 1212


>ref|XP_003590638.1| Protein TIME FOR COFFEE [Medicago truncatula]
            gi|355479686|gb|AES60889.1| Protein TIME FOR COFFEE
            [Medicago truncatula]
          Length = 1307

 Score =  122 bits (305), Expect = 1e-25
 Identities = 73/113 (64%), Positives = 75/113 (66%)
 Frame = -2

Query: 814  TLKNFSQEKGRVSQGHMQISFGGNYITSXXXXXXXXXXXXXXXXLCTTAAGTPFDGDNLK 635
            T KN   EKGR SQG MQISFGGNY TS                  TTAAG  F+G NLK
Sbjct: 1099 TTKN-DLEKGRFSQGRMQISFGGNYTTSLPSQGKHQLNNSQPLY--TTAAGNTFNGGNLK 1155

Query: 634  PNSEEKKVGSLVNASQSQQTENSSAGSSQKSSPVCRRNVPSILSSCPSHLSEL 476
            PN E  KV S VN SQ QQTENSS GS QKSSPVC RNVPSILSSCPSHLSE+
Sbjct: 1156 PNLEGWKVDSSVNTSQLQQTENSS-GSGQKSSPVCGRNVPSILSSCPSHLSEM 1207


>ref|XP_002302111.1| predicted protein [Populus trichocarpa] gi|222843837|gb|EEE81384.1|
            predicted protein [Populus trichocarpa]
          Length = 1262

 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 53/111 (47%), Positives = 70/111 (63%)
 Frame = -2

Query: 808  KNFSQEKGRVSQGHMQISFGGNYITSXXXXXXXXXXXXXXXXLCTTAAGTPFDGDNLKPN 629
            KN SQ++GRV QGH QISFG +  ++                  +++  +P  G N +  
Sbjct: 1160 KNASQQQGRVPQGHSQISFGSSSKSALPPQGQQI----------SSSCQSPSSGGNSRTT 1209

Query: 628  SEEKKVGSLVNASQSQQTENSSAGSSQKSSPVCRRNVPSILSSCPSHLSEL 476
            S   K  S + A QSQQ++NSS+G++QKSSPVC RNVPSILS+CPSHLSEL
Sbjct: 1210 SMNAKANSSIPAIQSQQSDNSSSGNAQKSSPVCGRNVPSILSACPSHLSEL 1260


>ref|XP_002306776.1| predicted protein [Populus trichocarpa] gi|222856225|gb|EEE93772.1|
            predicted protein [Populus trichocarpa]
          Length = 1161

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 49/111 (44%), Positives = 65/111 (58%)
 Frame = -2

Query: 808  KNFSQEKGRVSQGHMQISFGGNYITSXXXXXXXXXXXXXXXXLCTTAAGTPFDGDNLKPN 629
            KN SQ++GR  QG  QISFG +  ++                  +++  +P  G N    
Sbjct: 1059 KNASQQQGRAPQGRSQISFGQSSKSALPPQGQQI----------SSSNHSPSTGGNSITT 1108

Query: 628  SEEKKVGSLVNASQSQQTENSSAGSSQKSSPVCRRNVPSILSSCPSHLSEL 476
            S+     S V  +Q QQ +NSS+G++QKSSPVC RNVPSILS+CPSHLSEL
Sbjct: 1109 SKNANANSSVPVTQPQQCDNSSSGNAQKSSPVCGRNVPSILSTCPSHLSEL 1159


Top