BLASTX nr result

ID: Glycyrrhiza24_contig00006106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006106
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522415.1| PREDICTED: lysine-specific demethylase REF6-...   120   1e-25
ref|XP_003522416.1| PREDICTED: lysine-specific demethylase REF6-...   115   3e-24
ref|XP_003528125.1| PREDICTED: lysine-specific demethylase REF6-...   114   6e-24
ref|XP_003528124.1| PREDICTED: lysine-specific demethylase REF6-...   114   6e-24
ref|XP_002275305.1| PREDICTED: lysine-specific demethylase REF6-...   114   6e-24

>ref|XP_003522415.1| PREDICTED: lysine-specific demethylase REF6-like [Glycine max]
          Length = 1567

 Score =  120 bits (301), Expect = 1e-25
 Identities = 60/86 (69%), Positives = 70/86 (81%), Gaps = 7/86 (8%)
 Frame = +3

Query: 24  WQSGEHYTFQEFEAKAKAFEKTYLKKH-------GNGIKKCGALETETLFWKATVDKPFS 182
           WQSG+ YTF EFE+KAK+FEKTYLK+H       G+G+   G LETETLFWKAT+DKPFS
Sbjct: 102 WQSGDRYTFSEFESKAKSFEKTYLKRHSKKGSGSGSGL---GPLETETLFWKATLDKPFS 158

Query: 183 VEYANDMPGSAFSAVKCRHAGEAASI 260
           VEYANDMPGSAFS  KCRHAG+ +S+
Sbjct: 159 VEYANDMPGSAFSP-KCRHAGDPSSL 183


>ref|XP_003522416.1| PREDICTED: lysine-specific demethylase REF6-like [Glycine max]
          Length = 1552

 Score =  115 bits (289), Expect = 3e-24
 Identities = 58/86 (67%), Positives = 68/86 (79%), Gaps = 7/86 (8%)
 Frame = +3

Query: 24  WQSGEHYTFQEFEAKAKAFEKTYLKKH-------GNGIKKCGALETETLFWKATVDKPFS 182
           WQSG+ YTF EFE+KAK+FEKTYLK+H       G+G+   G LETETLFWKAT+DKPFS
Sbjct: 102 WQSGDRYTFSEFESKAKSFEKTYLKRHSKKGSGSGSGL---GPLETETLFWKATLDKPFS 158

Query: 183 VEYANDMPGSAFSAVKCRHAGEAASI 260
           VEYANDMPGSAFS  KCR  G+ +S+
Sbjct: 159 VEYANDMPGSAFSP-KCRRTGDPSSL 183


>ref|XP_003528125.1| PREDICTED: lysine-specific demethylase REF6-like [Glycine max]
          Length = 1565

 Score =  114 bits (286), Expect = 6e-24
 Identities = 56/81 (69%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
 Frame = +3

Query: 24  WQSGEHYTFQEFEAKAKAFEKTYLKKHGNGIKKCGA--LETETLFWKATVDKPFSVEYAN 197
           WQSG+ YTF EFE+KAK+FEKTYLK+H       G   LETETLFWKAT+DKPFSVEYAN
Sbjct: 102 WQSGDRYTFTEFESKAKSFEKTYLKRHAKKASGLGPGPLETETLFWKATLDKPFSVEYAN 161

Query: 198 DMPGSAFSAVKCRHAGEAASI 260
           DMPGSAFS  KCR  G+ +S+
Sbjct: 162 DMPGSAFSP-KCRRVGDPSSL 181


>ref|XP_003528124.1| PREDICTED: lysine-specific demethylase REF6-like [Glycine max]
          Length = 1586

 Score =  114 bits (286), Expect = 6e-24
 Identities = 56/81 (69%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
 Frame = +3

Query: 24  WQSGEHYTFQEFEAKAKAFEKTYLKKHGNGIKKCGA--LETETLFWKATVDKPFSVEYAN 197
           WQSG+ YTF EFE+KAK+FEKTYLK+H       G   LETETLFWKAT+DKPFSVEYAN
Sbjct: 102 WQSGDRYTFTEFESKAKSFEKTYLKRHAKKASGLGPGPLETETLFWKATLDKPFSVEYAN 161

Query: 198 DMPGSAFSAVKCRHAGEAASI 260
           DMPGSAFS  KCR  G+ +S+
Sbjct: 162 DMPGSAFSP-KCRRVGDPSSL 181


>ref|XP_002275305.1| PREDICTED: lysine-specific demethylase REF6-like [Vitis vinifera]
          Length = 1295

 Score =  114 bits (286), Expect = 6e-24
 Identities = 59/82 (71%), Positives = 65/82 (79%), Gaps = 3/82 (3%)
 Frame = +3

Query: 24  WQSGEHYTFQEFEAKAKAFEKTYLKKHGNGIKKCGALETETLFWKATVDKPFSVEYANDM 203
           WQSGE+YTFQEFEAKA+AFEK YLKK     K   ALE ETLFWKA+VDKPFSVEYANDM
Sbjct: 113 WQSGEYYTFQEFEAKARAFEKNYLKKSSK--KPLSALEIETLFWKASVDKPFSVEYANDM 170

Query: 204 PGSAF---SAVKCRHAGEAASI 260
           PGSAF   S+ K R AGEA ++
Sbjct: 171 PGSAFVPVSSKKWREAGEAVTV 192


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