BLASTX nr result

ID: Glycyrrhiza24_contig00006082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006082
         (795 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595391.1| 50S ribosomal protein L18 [Medicago truncatu...   260   3e-67
gb|AFK34990.1| unknown [Lotus japonicus] gi|388495768|gb|AFK3595...   259   6e-67
gb|ACJ84202.1| unknown [Medicago truncatula]                          258   8e-67
ref|XP_003546534.1| PREDICTED: 50S ribosomal protein L18, chloro...   256   5e-66
ref|NP_001236805.1| uncharacterized protein LOC100306308 [Glycin...   256   5e-66

>ref|XP_003595391.1| 50S ribosomal protein L18 [Medicago truncatula]
           gi|124360326|gb|ABN08339.1| Ribosomal protein L18
           [Medicago truncatula] gi|355484439|gb|AES65642.1| 50S
           ribosomal protein L18 [Medicago truncatula]
           gi|388519743|gb|AFK47933.1| unknown [Medicago
           truncatula]
          Length = 166

 Score =  260 bits (664), Expect = 3e-67
 Identities = 136/168 (80%), Positives = 144/168 (85%), Gaps = 3/168 (1%)
 Frame = +3

Query: 117 MLASALSFLHSCAFPXXXXXXX--LFTIPTPNRNPSSS-LSFVVEAKATTRREDRTARHT 287
           ML S+LSFLHSC FP         LFTIPTPN N SSS LSFVV+A  TTRREDR ARH 
Sbjct: 1   MLTSSLSFLHSCTFPSSSSSSSSSLFTIPTPNPNSSSSSLSFVVQA--TTRREDRIARHV 58

Query: 288 RIRKKVEGTPERPRLSVFRSNKHLCVQVIDDSNMHTLASVSTMQKTIAEEFNYTSGPTIE 467
           R+RKK+EGTPERPRLSVFRSNKHL VQVIDD+ MHTLAS STMQK IAEE N+TSGPTIE
Sbjct: 59  RLRKKIEGTPERPRLSVFRSNKHLFVQVIDDTKMHTLASASTMQKAIAEELNFTSGPTIE 118

Query: 468 VAKRVGEIIAKSCVEKGITKVAFDRGGYPYHGRVKALADAAREHGLEF 611
           VAKRVGEIIAKSC+EKGITKV FDRGGYPYHGRVKA+ADAAREHGLEF
Sbjct: 119 VAKRVGEIIAKSCLEKGITKVVFDRGGYPYHGRVKAIADAAREHGLEF 166


>gb|AFK34990.1| unknown [Lotus japonicus] gi|388495768|gb|AFK35950.1| unknown
           [Lotus japonicus]
          Length = 162

 Score =  259 bits (661), Expect = 6e-67
 Identities = 131/165 (79%), Positives = 144/165 (87%)
 Frame = +3

Query: 117 MLASALSFLHSCAFPXXXXXXXLFTIPTPNRNPSSSLSFVVEAKATTRREDRTARHTRIR 296
           M+AS+LSFLHSCAFP       LFT  TPN N   SL FVVEAK+ TR +DRTARH RIR
Sbjct: 1   MVASSLSFLHSCAFPSSSSSSSLFTTSTPNPN---SLPFVVEAKSRTRTDDRTARHARIR 57

Query: 297 KKVEGTPERPRLSVFRSNKHLCVQVIDDSNMHTLASVSTMQKTIAEEFNYTSGPTIEVAK 476
           KKVEGTPERPRL+VFRSNKHL VQVIDD+ MHTLAS STMQK IAEEF+YT+GPTIEVAK
Sbjct: 58  KKVEGTPERPRLAVFRSNKHLAVQVIDDTKMHTLASASTMQKAIAEEFSYTAGPTIEVAK 117

Query: 477 RVGEIIAKSCVEKGITKVAFDRGGYPYHGRVKALADAAREHGLEF 611
           +VGEIIAKSC+EKGITKVAFDRGGYPYHGRV+ALADAARE+GL+F
Sbjct: 118 KVGEIIAKSCLEKGITKVAFDRGGYPYHGRVQALADAARENGLDF 162


>gb|ACJ84202.1| unknown [Medicago truncatula]
          Length = 166

 Score =  258 bits (660), Expect = 8e-67
 Identities = 135/168 (80%), Positives = 143/168 (85%), Gaps = 3/168 (1%)
 Frame = +3

Query: 117 MLASALSFLHSCAFPXXXXXXX--LFTIPTPNRNPSSS-LSFVVEAKATTRREDRTARHT 287
           ML S+LSFLHSC FP         LFTIPTPN N SSS LSFVV+A  TTRREDR ARH 
Sbjct: 1   MLTSSLSFLHSCTFPSSSSSSSSSLFTIPTPNPNSSSSSLSFVVQA--TTRREDRIARHV 58

Query: 288 RIRKKVEGTPERPRLSVFRSNKHLCVQVIDDSNMHTLASVSTMQKTIAEEFNYTSGPTIE 467
           R+RKK+EGTPERPRLSVFRSNKHL VQVIDD+ MHTLAS STMQK IAEE N+TSGPTIE
Sbjct: 59  RLRKKIEGTPERPRLSVFRSNKHLFVQVIDDTKMHTLASASTMQKAIAEELNFTSGPTIE 118

Query: 468 VAKRVGEIIAKSCVEKGITKVAFDRGGYPYHGRVKALADAAREHGLEF 611
           VAKRVGEIIAKSC+EKGITKV FDRGGYPYHGRVK +ADAAREHGLEF
Sbjct: 119 VAKRVGEIIAKSCLEKGITKVVFDRGGYPYHGRVKTIADAAREHGLEF 166


>ref|XP_003546534.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Glycine
           max]
          Length = 162

 Score =  256 bits (653), Expect = 5e-66
 Identities = 130/165 (78%), Positives = 143/165 (86%)
 Frame = +3

Query: 117 MLASALSFLHSCAFPXXXXXXXLFTIPTPNRNPSSSLSFVVEAKATTRREDRTARHTRIR 296
           MLAS+LSFLHSC  P       L +I  PN  PS  L FVVEAK  TRREDRTARHTRIR
Sbjct: 1   MLASSLSFLHSCTSPSSSS---LLSISPPNPKPSHFLPFVVEAKDRTRREDRTARHTRIR 57

Query: 297 KKVEGTPERPRLSVFRSNKHLCVQVIDDSNMHTLASVSTMQKTIAEEFNYTSGPTIEVAK 476
           KKVEGTPERPRLSVFRSNKHL VQVIDD+ M TLASVSTMQKT+A+EFNY++GPT+EVAK
Sbjct: 58  KKVEGTPERPRLSVFRSNKHLSVQVIDDTAMRTLASVSTMQKTVADEFNYSAGPTVEVAK 117

Query: 477 RVGEIIAKSCVEKGITKVAFDRGGYPYHGRVKALADAAREHGLEF 611
           R+GEIIAKSC+EKGITKVAFDRGGYPYHGRV+ALA+AAREHGL+F
Sbjct: 118 RMGEIIAKSCLEKGITKVAFDRGGYPYHGRVQALAEAAREHGLDF 162


>ref|NP_001236805.1| uncharacterized protein LOC100306308 [Glycine max]
           gi|255628163|gb|ACU14426.1| unknown [Glycine max]
          Length = 160

 Score =  256 bits (653), Expect = 5e-66
 Identities = 128/165 (77%), Positives = 145/165 (87%)
 Frame = +3

Query: 117 MLASALSFLHSCAFPXXXXXXXLFTIPTPNRNPSSSLSFVVEAKATTRREDRTARHTRIR 296
           MLAS+LSFLHSC+         L +I  PN  PS SL FV+EAK  TRREDR+ARHTRIR
Sbjct: 1   MLASSLSFLHSCS-----SSSFLLSISLPNPKPSHSLPFVLEAKDRTRREDRSARHTRIR 55

Query: 297 KKVEGTPERPRLSVFRSNKHLCVQVIDDSNMHTLASVSTMQKTIAEEFNYTSGPTIEVAK 476
           KKVEGTPERPRLSVFRSNKHL VQVIDD+ MHTLAS+STMQKT+AEEFNY++GPT+EVAK
Sbjct: 56  KKVEGTPERPRLSVFRSNKHLSVQVIDDTKMHTLASISTMQKTVAEEFNYSAGPTLEVAK 115

Query: 477 RVGEIIAKSCVEKGITKVAFDRGGYPYHGRVKALADAAREHGLEF 611
           R+GEIIAKSC+EKGITKVAFD+GGYPYHGRV+ALA+AAREHGL+F
Sbjct: 116 RMGEIIAKSCLEKGITKVAFDQGGYPYHGRVQALAEAAREHGLDF 160


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