BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006074
         (686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptas...    75   6e-30
gb|ABE80156.1| Ribonuclease H [Medicago truncatula]                    75   7e-29
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...    73   1e-26
ref|XP_003613802.1| S-like ribonuclease [Medicago truncatula] gi...    77   1e-24
ref|XP_003612606.1| Replication protein A1-like protein [Medicag...    65   4e-22

>gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 869

 Score = 75.1 bits (183), Expect(3) = 6e-30
 Identities = 33/84 (39%), Positives = 46/84 (54%)
 Frame = +2

Query: 89  LHKRGLSVFVTCQRRGVTEESFLHCIGDCALPRESWKKLGMEDPPFFSIQDFHNWLRMAL 268
           LH R +    TC R GV++ES  HCI DC   +  W  +G  +P FF++ D   W +  L
Sbjct: 581 LHHRQIIASATCARCGVSDESVFHCIRDCPFSKIIWHHIGFSEPYFFAVTDIEIWCKSGL 640

Query: 269 TGSNNPLILAGIWFALCARNATCI 340
            GS   L  AG+W+   +RNA C+
Sbjct: 641 IGSKAILFAAGLWWIWRSRNARCM 664



 Score = 73.9 bits (180), Expect(3) = 6e-30
 Identities = 36/91 (39%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
 Frame = +3

Query: 369 RYVTWHPNWEEMMVLNMDGSCVGSPGRGAYGDLLCKANGEWITGFAGSV-GASDSLQAEL 545
           RYV W+ +     +LN+DGSC+GSP R  +G L+  + G +++GF G +  +SD L AEL
Sbjct: 700 RYVKWNNSNFNCTILNVDGSCIGSPIRAGFGGLIRNSVGFYLSGFLGFLPSSSDILLAEL 759

Query: 546 AALFRGLQVPRDLGIHHLRCYSDSMAALELV 638
            A++ G+    D+GI  +  YSDS+ ++ L+
Sbjct: 760 TAIYDGINTAIDMGITDMAVYSDSLLSINLI 790



 Score = 28.1 bits (61), Expect(3) = 6e-30
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +3

Query: 18  GNGFTTLEWSWI*KLQCLEKIKFL 89
           GN   T  WSWI K +  EK KFL
Sbjct: 543 GNDNNTHSWSWILKKKISEKYKFL 566


>gb|ABE80156.1| Ribonuclease H [Medicago truncatula]
          Length = 438

 Score = 74.7 bits (182), Expect(3) = 7e-29
 Identities = 36/91 (39%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
 Frame = +3

Query: 369 RYVTWHPNWEEMMVLNMDGSCVGSPGRGAYGDLLCKANGEWITGFAGSV-GASDSLQAEL 545
           R+V W+       +LN+DGSC+G+P R  YG +L  + G +I+GF+G +  ++D LQAEL
Sbjct: 269 RFVKWNNRNHHDHILNVDGSCLGTPSRTGYGGILRNSAGLFISGFSGFIPNSTDILQAEL 328

Query: 546 AALFRGLQVPRDLGIHHLRCYSDSMAALELV 638
            A+ + L +  D  ++ + CYSDS+ A+ L+
Sbjct: 329 TAIHQSLHMVIDSNMNDVMCYSDSLLAVNLI 359



 Score = 73.2 bits (178), Expect(3) = 7e-29
 Identities = 31/97 (31%), Positives = 53/97 (54%)
 Frame = +2

Query: 89  LHKRGLSVFVTCQRRGVTEESFLHCIGDCALPRESWKKLGMEDPPFFSIQDFHNWLRMAL 268
           LH+R ++   TC R G  +E+FLHC+ DC   R  W+K+G     FF+    H+W ++ +
Sbjct: 150 LHRRNIAPSPTCARCGEEDETFLHCVRDCHFSRSIWQKIGFTGNDFFTATSAHDWFKIGM 209

Query: 269 TGSNNPLILAGIWFALCARNATCIGLAEGYHMAKICD 379
           + S   +   G+W+A   RN  C+   E   + ++C+
Sbjct: 210 SSSLPDIFFGGLWWAWRHRNLMCLN-NETMSLFRLCN 245



 Score = 25.8 bits (55), Expect(3) = 7e-29
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +3

Query: 42  WSWI*KLQCLEKIKFL 89
           WSWI  LQ  EK KFL
Sbjct: 120 WSWIWNLQVPEKYKFL 135


>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 1296

 Score = 73.2 bits (178), Expect(2) = 1e-26
 Identities = 35/93 (37%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
 Frame = +3

Query: 369  RYVTWHPNWEEMMVLNMDGSCVGSPGRGAYGDLLCKANGEWITGFAGSVGAS-DSLQAEL 545
            R V W+    +  +LN+DGSC+G+P R  +G +     G +++G++G +  S D L AEL
Sbjct: 1127 RMVKWNQGNHQCHILNVDGSCLGTPIRAGFGGIFRNNVGGYLSGYSGFISESTDILLAEL 1186

Query: 546  AALFRGLQVPRDLGIHHLRCYSDSMAALELVCK 644
             AL +GL +  ++GI  L CYSDS+  + L+ +
Sbjct: 1187 TALHQGLIMAAEMGIEELACYSDSLLTINLITR 1219



 Score = 72.4 bits (176), Expect(2) = 1e-26
 Identities = 33/84 (39%), Positives = 45/84 (53%)
 Frame = +2

Query: 89   LHKRGLSVFVTCQRRGVTEESFLHCIGDCALPRESWKKLGMEDPPFFSIQDFHNWLRMAL 268
            LH R ++   TC R G  +ESFLHC+ DC      W KLG     FFS+    +W+R   
Sbjct: 1007 LHHRKMAPAATCSRCGENDESFLHCVRDCKHSAAIWHKLGFVTAAFFSVSSVQDWIRNFS 1066

Query: 269  TGSNNPLILAGIWFALCARNATCI 340
            +GS     LAG+W++   RN  C+
Sbjct: 1067 SGSRAITFLAGLWWSWRHRNLMCL 1090


>ref|XP_003613802.1| S-like ribonuclease [Medicago truncatula]
           gi|355515137|gb|AES96760.1| S-like ribonuclease
           [Medicago truncatula]
          Length = 552

 Score = 77.0 bits (188), Expect(2) = 1e-24
 Identities = 36/98 (36%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
 Frame = +3

Query: 348 QKGTTWQRYVTWHPNWEEMMVLNMDGSCVGSPGRGAYGDLLCKANGEWITGFAGSV-GAS 524
           + G   +R++ W+ N    ++LN+DGSC+GSP R  Y  LL    G +++GF+G +  +S
Sbjct: 376 RNGVIEERFIKWNNNNHSCVILNVDGSCLGSPSRAGYDGLLRNHAGYYLSGFSGYIHNSS 435

Query: 525 DSLQAELAALFRGLQVPRDLGIHHLRCYSDSMAALELV 638
           D    EL A++ GL + ++  +  L CYSDSM  + L+
Sbjct: 436 DIFYVELFAIYHGLLLAKEKNVVDLVCYSDSMHCINLI 473



 Score = 62.4 bits (150), Expect(2) = 1e-24
 Identities = 29/87 (33%), Positives = 44/87 (50%)
 Frame = +2

Query: 80  QISLHKRGLSVFVTCQRRGVTEESFLHCIGDCALPRESWKKLGMEDPPFFSIQDFHNWLR 259
           +I + +R +S   TC R G  EE+FL C+ DC   R  W         FF     H+WL+
Sbjct: 261 EILIDRRNISTSATCSRCGFYEETFLQCVCDCEFSRNIWYHFNYNHSTFFECLVPHDWLK 320

Query: 260 MALTGSNNPLILAGIWFALCARNATCI 340
             L G+++   +A +W+A   RN  C+
Sbjct: 321 DGLLGAHSFTFVAIVWWAWRHRNIMCL 347


>ref|XP_003612606.1| Replication protein A1-like protein [Medicago truncatula]
           gi|355513941|gb|AES95564.1| Replication protein A1-like
           protein [Medicago truncatula]
          Length = 708

 Score = 64.7 bits (156), Expect(3) = 4e-22
 Identities = 32/89 (35%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
 Frame = +3

Query: 375 VTWHPNWEEMMVLNMDGSCVGSPGRGAYGDLLCKANGEWITGFAGSV-GASDSLQAELAA 551
           V W+ N    ++LN+D SC+GSP R  YG +L      +++GF+G +  +S+ L AEL A
Sbjct: 171 VKWNNNNHSCVILNVDLSCLGSPTRAGYGGVLRNYASFYLSGFSGYIQNSSNILFAELYA 230

Query: 552 LFRGLQVPRDLGIHHLRCYSDSMAALELV 638
           +++GL + +++G   L CYS+S+  + ++
Sbjct: 231 IYQGLLLAKNMGNSDLFCYSNSLHCINIL 259



 Score = 58.2 bits (139), Expect(3) = 4e-22
 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
 Frame = +2

Query: 83  ISLHKRG-LSVFVTCQRRGVTEESFLHCIGDCALPRESWKKLGMEDPP-FFSIQDFHNWL 256
           ISL   G +S    C R G+  E+FLHC+ DC   +  W + G   P  FFS +D  +W+
Sbjct: 46  ISLLNHGNISHSTVCNRCGIHNETFLHCVRDCIHSKPLWHQSGFTHPDFFFSNEDIIDWI 105

Query: 257 RMALTGSNNPLILAGIWFALCARNATCIG 343
           +  + GS +    + IW     RN  C+G
Sbjct: 106 KNGVMGSGSFSFASTIWSTWRNRNMMCLG 134



 Score = 27.7 bits (60), Expect(3) = 4e-22
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +3

Query: 42 WSWI*KLQCLEKIKFL 89
          W WI KL+ LEKIKF+
Sbjct: 19 WIWIWKLKLLEKIKFI 34