BLASTX nr result

ID: Glycyrrhiza24_contig00006073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006073
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302121.1| predicted protein [Populus trichocarpa] gi|1...    92   3e-24
ref|XP_002306766.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-24
emb|CBI32365.3| unnamed protein product [Vitis vinifera]               91   4e-24
ref|XP_003518667.1| PREDICTED: small nuclear ribonucleoprotein S...    91   7e-24
gb|AFK42989.1| unknown [Lotus japonicus]                               91   7e-24

>ref|XP_002302121.1| predicted protein [Populus trichocarpa] gi|118482633|gb|ABK93236.1|
           unknown [Populus trichocarpa]
           gi|118488779|gb|ABK96200.1| unknown [Populus
           trichocarpa] gi|222843847|gb|EEE81394.1| predicted
           protein [Populus trichocarpa]
          Length = 115

 Score = 92.0 bits (227), Expect(2) = 3e-24
 Identities = 44/44 (100%), Positives = 44/44 (100%)
 Frame = -3

Query: 132 GVDISMNTHLKTVKLTVKGKNPVTLDHLSVRGNNIRYYILPDSL 1
           GVDISMNTHLKTVKLTVKGKNPVTLDHLSVRGNNIRYYILPDSL
Sbjct: 31  GVDISMNTHLKTVKLTVKGKNPVTLDHLSVRGNNIRYYILPDSL 74



 Score = 44.7 bits (104), Expect(2) = 3e-24
 Identities = 21/22 (95%), Positives = 22/22 (100%)
 Frame = -1

Query: 281 MKLVRFLMKLNNETVAIELKNG 216
           MKLVRFLMKLNNETV+IELKNG
Sbjct: 1   MKLVRFLMKLNNETVSIELKNG 22


>ref|XP_002306766.1| predicted protein [Populus trichocarpa] gi|222856215|gb|EEE93762.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score = 92.0 bits (227), Expect(2) = 3e-24
 Identities = 44/44 (100%), Positives = 44/44 (100%)
 Frame = -3

Query: 132 GVDISMNTHLKTVKLTVKGKNPVTLDHLSVRGNNIRYYILPDSL 1
           GVDISMNTHLKTVKLTVKGKNPVTLDHLSVRGNNIRYYILPDSL
Sbjct: 31  GVDISMNTHLKTVKLTVKGKNPVTLDHLSVRGNNIRYYILPDSL 74



 Score = 44.7 bits (104), Expect(2) = 3e-24
 Identities = 21/22 (95%), Positives = 22/22 (100%)
 Frame = -1

Query: 281 MKLVRFLMKLNNETVAIELKNG 216
           MKLVRFLMKLNNETV+IELKNG
Sbjct: 1   MKLVRFLMKLNNETVSIELKNG 22


>emb|CBI32365.3| unnamed protein product [Vitis vinifera]
          Length = 144

 Score = 90.9 bits (224), Expect(2) = 4e-24
 Identities = 43/44 (97%), Positives = 44/44 (100%)
 Frame = -3

Query: 132 GVDISMNTHLKTVKLTVKGKNPVTLDHLSVRGNNIRYYILPDSL 1
           GVDISMNTHLKTVKLT+KGKNPVTLDHLSVRGNNIRYYILPDSL
Sbjct: 61  GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 104



 Score = 45.4 bits (106), Expect(2) = 4e-24
 Identities = 22/25 (88%), Positives = 23/25 (92%)
 Frame = -1

Query: 290 SAAMKLVRFLMKLNNETVAIELKNG 216
           S  MKLVRFLMKLNNETV+IELKNG
Sbjct: 28  SPKMKLVRFLMKLNNETVSIELKNG 52


>ref|XP_003518667.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 2
           [Glycine max]
          Length = 126

 Score = 90.9 bits (224), Expect(2) = 7e-24
 Identities = 43/44 (97%), Positives = 44/44 (100%)
 Frame = -3

Query: 132 GVDISMNTHLKTVKLTVKGKNPVTLDHLSVRGNNIRYYILPDSL 1
           GVDISMNTHLKTVKLT+KGKNPVTLDHLSVRGNNIRYYILPDSL
Sbjct: 41  GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 84



 Score = 44.7 bits (104), Expect(2) = 7e-24
 Identities = 21/22 (95%), Positives = 22/22 (100%)
 Frame = -1

Query: 281 MKLVRFLMKLNNETVAIELKNG 216
           MKLVRFLMKLNNETV+IELKNG
Sbjct: 1   MKLVRFLMKLNNETVSIELKNG 22


>gb|AFK42989.1| unknown [Lotus japonicus]
          Length = 116

 Score = 90.9 bits (224), Expect(2) = 7e-24
 Identities = 43/44 (97%), Positives = 44/44 (100%)
 Frame = -3

Query: 132 GVDISMNTHLKTVKLTVKGKNPVTLDHLSVRGNNIRYYILPDSL 1
           GVDISMNTHLKTVKLT+KGKNPVTLDHLSVRGNNIRYYILPDSL
Sbjct: 31  GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 74



 Score = 44.7 bits (104), Expect(2) = 7e-24
 Identities = 21/22 (95%), Positives = 22/22 (100%)
 Frame = -1

Query: 281 MKLVRFLMKLNNETVAIELKNG 216
           MKLVRFLMKLNNETV+IELKNG
Sbjct: 1   MKLVRFLMKLNNETVSIELKNG 22


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