BLASTX nr result

ID: Glycyrrhiza24_contig00006046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006046
         (1334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611349.1| RING-H2 finger protein ATL1E [Medicago trunc...   352   1e-94
ref|XP_003538750.1| PREDICTED: RING-H2 finger protein ATL22-like...   323   8e-86
ref|XP_003516656.1| PREDICTED: uncharacterized protein LOC100790...   323   8e-86
gb|AFK41658.1| unknown [Lotus japonicus]                              320   5e-85
emb|CAN68814.1| hypothetical protein VITISV_001086 [Vitis vinifera]   227   5e-57

>ref|XP_003611349.1| RING-H2 finger protein ATL1E [Medicago truncatula]
            gi|355512684|gb|AES94307.1| RING-H2 finger protein ATL1E
            [Medicago truncatula]
          Length = 245

 Score =  352 bits (903), Expect = 1e-94
 Identities = 178/256 (69%), Positives = 202/256 (78%), Gaps = 2/256 (0%)
 Frame = -3

Query: 1098 MGALIFLIPFWVFIFQSCAIEVTYASFHATELGDAGPDIRFPFHIKGQQQPQ--HDGALP 925
            M +L FL  F  FIFQ+        S +  ++   GP I +PFHIKGQQQ Q  +D  L 
Sbjct: 1    MNSLFFLTLFLAFIFQT--------SVNCNDI--PGPSIHYPFHIKGQQQQQQEYDTTLS 50

Query: 924  GFELIRKDNTTTIHFPSYGDLVVKSISYDTKRIDLVDPKKCAHRVFLNLNLTLTPFHYYY 745
            GFEL+ KDN TTIHFPSYGDLVVKSISYDTK+IDL+DPK C HRVFLNLNLTLTPF YYY
Sbjct: 51   GFELLHKDNITTIHFPSYGDLVVKSISYDTKKIDLLDPKNCVHRVFLNLNLTLTPFQYYY 110

Query: 744  VLKNYTYLNCSTTLPPPNFIEVPCLSGSNYHVYTVDPALPVPSSCKEVKTVAIPFKYSPY 565
            VLKN+TYLNCST L    FIEVPCLS S+YHVYTVDP LP+PSSCK+VKT+AIPFKYSPY
Sbjct: 111  VLKNFTYLNCSTRLSQTKFIEVPCLSDSSYHVYTVDPELPMPSSCKKVKTIAIPFKYSPY 170

Query: 564  LSDNDSLGLRLTWDLRESEDSKEGNQTRDSHTIRYTVLGLSIFVIVMATLLSKKVHVSTR 385
            +SDN SLGLRLTWDLRESE+SKE N+TRDSH  RYTVLG+ I + V+ATL+  KVH+S R
Sbjct: 171  ISDN-SLGLRLTWDLRESEESKEWNKTRDSHIARYTVLGVGICIFVVATLVGIKVHLSRR 229

Query: 384  NLHKKEGQLLQGLADV 337
            N HKKEG LL  +ADV
Sbjct: 230  NFHKKEGPLLHSVADV 245


>ref|XP_003538750.1| PREDICTED: RING-H2 finger protein ATL22-like [Glycine max]
          Length = 242

 Score =  323 bits (827), Expect = 8e-86
 Identities = 174/251 (69%), Positives = 195/251 (77%), Gaps = 2/251 (0%)
 Frame = -3

Query: 1098 MGALIFLIPFWVFIFQSCAIEVTYASFHATELGDAGPDIRFPFHIKGQQQPQHDGALPGF 919
            M A IFL    VF FQS   +VTY+    T+ GDAGP+I +P+ IKGQQQ Q+D AL GF
Sbjct: 1    MDAFIFLFLLCVFCFQS---KVTYS----TKCGDAGPEIHYPYQIKGQQQQQND-ALSGF 52

Query: 918  ELIRKDNTTTIHFPSYGDLVVKSISYDTKRIDLVDPKKCAHRVFLNLNLTLTPFHYYYVL 739
            EL+ KDN TTIHFPSYG+LVVKSISYDTK I L+DP  CAHRVFLNLNL+LTPFHY+YVL
Sbjct: 53   ELLCKDNLTTIHFPSYGNLVVKSISYDTKNIHLLDPNNCAHRVFLNLNLSLTPFHYFYVL 112

Query: 738  KNYTYLNCSTTLPPPNFIEVPCLSGSNYHVYTVDPALPVPSSCKEVKTVAIPFKYSPYLS 559
            KNYTYLNCSTTLP P F+EVPCLS S+YHVYTVDPA+PVP SC+ VKTVAIPF YSPYLS
Sbjct: 113  KNYTYLNCSTTLPRP-FVEVPCLSASSYHVYTVDPAVPVPGSCEGVKTVAIPFAYSPYLS 171

Query: 558  DNDSLGLRLTWDLRESEDSKEGNQTRDSHTIRYTVLGLSIFVIVMATLL--SKKVHVSTR 385
            D  SLGLRLTW LRE E ++  N  R SH  R  V+G SI V VMA LL  S KV  +TR
Sbjct: 172  DK-SLGLRLTWHLRELEGNEAVNLNRSSHKSRNIVIGFSICVFVMAMLLLISIKVRGATR 230

Query: 384  NLHKKEGQLLQ 352
            NLH+KE QLLQ
Sbjct: 231  NLHQKEEQLLQ 241


>ref|XP_003516656.1| PREDICTED: uncharacterized protein LOC100790327 [Glycine max]
          Length = 242

 Score =  323 bits (827), Expect = 8e-86
 Identities = 177/252 (70%), Positives = 196/252 (77%), Gaps = 3/252 (1%)
 Frame = -3

Query: 1098 MGALIFLIPFWVFIFQSCAIEVTYASFHATELGDAGPDIRFPFHIKGQQQPQHDGALPGF 919
            MGA IFL    VF FQS   +VTYA    T  GDAGP+I +P+ IKGQQQ QH  +LPGF
Sbjct: 1    MGAFIFLFLLCVFCFQS---KVTYA----TRCGDAGPEIHYPYQIKGQQQ-QHK-SLPGF 51

Query: 918  ELIRKDNTTTIHFPSYGDLVVKSISYDTKRIDLVDPKKCAHRVFLNLNLTLTPFHYYYVL 739
            EL+ KDN TTIHFPSYGDLVVKSISYDTK I L+DPK CAH VFLNLNL+LTPFHY+YVL
Sbjct: 52   ELLCKDNLTTIHFPSYGDLVVKSISYDTKNIHLLDPKNCAHHVFLNLNLSLTPFHYFYVL 111

Query: 738  KNYTYLNCSTTLPPPNFIEVPCLSGSNYHVYTVDPALPVPSSCKEVKTVAIPFKYSPYLS 559
            KNYTYLNCSTTLP P  +EVPCLS S+YHVYTVDPA+PVP SC  VKTVAIPF YSPYLS
Sbjct: 112  KNYTYLNCSTTLPHP-LVEVPCLSASSYHVYTVDPAVPVPGSCDGVKTVAIPFAYSPYLS 170

Query: 558  DNDSLGLRLTWDLRESEDSKEG-NQTRDSHTIRYTVLGLSIFVIVMATLL--SKKVHVST 388
            D  SLGLRLTW LRE  D++   N+TR S+  R  V+G SI V VMA LL  S KV  +T
Sbjct: 171  DK-SLGLRLTWHLREPLDNEAAVNRTRGSYKSRNIVIGSSICVFVMAMLLLISMKVRGAT 229

Query: 387  RNLHKKEGQLLQ 352
            RNLH+KEGQLLQ
Sbjct: 230  RNLHQKEGQLLQ 241


>gb|AFK41658.1| unknown [Lotus japonicus]
          Length = 234

 Score =  320 bits (820), Expect = 5e-85
 Identities = 171/253 (67%), Positives = 191/253 (75%)
 Frame = -3

Query: 1098 MGALIFLIPFWVFIFQSCAIEVTYASFHATELGDAGPDIRFPFHIKGQQQPQHDGALPGF 919
            M A IFLI FWVF F     EVT+AS          PDI +PFHIKG+Q PQHD     F
Sbjct: 1    MAAPIFLILFWVFTFSCSVFEVTHAS----------PDIHYPFHIKGKQ-PQHDSH---F 46

Query: 918  ELIRKDNTTTIHFPSYGDLVVKSISYDTKRIDLVDPKKCAHRVFLNLNLTLTPFHYYYVL 739
            EL++++ TTTIHFPSYGDL+V SISYDTK I L DPK C HRVF+NLNLTLTPF YYYVL
Sbjct: 47   ELLQENTTTTIHFPSYGDLLVNSISYDTKNIYLADPKNCPHRVFMNLNLTLTPFQYYYVL 106

Query: 738  KNYTYLNCSTTLPPPNFIEVPCLSGSNYHVYTVDPALPVPSSCKEVKTVAIPFKYSPYLS 559
            KNYTYLNCST L  P FIE+PCLS S+YHVYTVDPALPVP SCK +KTVAIPFKYSPY S
Sbjct: 107  KNYTYLNCSTKLSSP-FIEIPCLSDSSYHVYTVDPALPVPGSCKGIKTVAIPFKYSPYRS 165

Query: 558  DNDSLGLRLTWDLRESEDSKEGNQTRDSHTIRYTVLGLSIFVIVMATLLSKKVHVSTRNL 379
            DN S GLRLTWDL +S +  EGNQTRDS+   Y V+G+ I V+VM TL+S KVHVS R+ 
Sbjct: 166  DN-SFGLRLTWDLHDSRE--EGNQTRDSYMTHYAVVGVIICVLVMVTLVSIKVHVSRRDF 222

Query: 378  HKKEGQLLQGLAD 340
             KKE QLL  LAD
Sbjct: 223  DKKERQLL--LAD 233


>emb|CAN68814.1| hypothetical protein VITISV_001086 [Vitis vinifera]
          Length = 406

 Score =  227 bits (579), Expect = 5e-57
 Identities = 123/220 (55%), Positives = 150/220 (68%), Gaps = 8/220 (3%)
 Frame = -3

Query: 1002 GDAGPDIRFPFHIKGQQQPQHDGALPGFELIRKDNTTTIHFPSYGDLVVKSISYDTKRID 823
            GD  PDIRFPF +KGQQ PQH G  PGFEL+ K+N+T I FPSYGDLV++SISYD K+++
Sbjct: 163  GDGAPDIRFPFRLKGQQ-PQHCG-YPGFELVCKENSTMIQFPSYGDLVIQSISYDMKKLN 220

Query: 822  LVDPKKCAHRVFLNLNLTLTPFHYYYVLKNYTYLNCSTTLPPPNFIEVPCLSGSNYHVYT 643
            L+DPK C H VFLNLNL+LTPF YYY +KNYTYLNCS  L  P+F  VPCLSGS YHVYT
Sbjct: 221  LLDPKSCVHEVFLNLNLSLTPFQYYYHVKNYTYLNCSAQL-SPSFAPVPCLSGSQYHVYT 279

Query: 642  VDPALPVPSSCKEVKTVAIPFKYSPYLSDNDSLGLRLTWDLRESED--------SKEGNQ 487
            V+ +     SC  +KT+AIPF YSPYLSDN + GL LTW L    +        SK G+Q
Sbjct: 280  VESSXASRLSCMPMKTIAIPFPYSPYLSDN-TFGLGLTWTLPGCNEKGGHCNLQSKTGDQ 338

Query: 486  TRDSHTIRYTVLGLSIFVIVMATLLSKKVHVSTRNLHKKE 367
            T   +    T     IF  ++A L+S K+H S +   +KE
Sbjct: 339  TSCFNKGLIT----GIFAFIVAILISIKIHNSKKLNGQKE 374


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