BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006009
         (902 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548486.1| PREDICTED: transcription-repair-coupling fac...   246   4e-63
ref|XP_003553316.1| PREDICTED: transcription-repair-coupling fac...   241   2e-61
dbj|BAJ34179.1| unnamed protein product [Thellungiella halophila]     210   4e-52
ref|XP_002276313.1| PREDICTED: transcription-repair-coupling fac...   204   3e-50
ref|NP_566160.1| putative DEAD/DEAH box helicase [Arabidopsis th...   203   5e-50

>ref|XP_003548486.1| PREDICTED: transcription-repair-coupling factor-like [Glycine max]
          Length = 826

 Score =  246 bits (629), Expect = 4e-63
 Identities = 133/199 (66%), Positives = 162/199 (81%), Gaps = 1/199 (0%)
 Frame = +2

Query: 308 IPQHVIPSPLITNKLSSSPKTWSLFILNYPSLLHHNSNSKRQRHVPFS-INAVYTQGLYA 484
           +P+  IP+PLI+ K+SSSP+TWSLFIL YPS   +N+N+   + +  S  NAVYTQ  Y 
Sbjct: 9   LPRSHIPTPLIS-KISSSPRTWSLFILTYPSHPKNNNNNNNNKRLFLSPTNAVYTQSPYT 67

Query: 485 PSPVPSSKTEKTEVDNDPISLVNERVRREYGKREVSLRTVMDSEEAEKYIKMVKEQQQRG 664
           PS  PS    KTE+ NDPI+++NER+RR+  K+E + RTVMDSEEA KY+KMVK QQQRG
Sbjct: 68  PS-TPS----KTELHNDPITVLNERIRRDLSKKE-AFRTVMDSEEAGKYMKMVKVQQQRG 121

Query: 665 LQKLKGVNREGAKDGAFSYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVPKNSDEPTEYV 844
           LQKLKG +RE +KDG FSYKVDPYTLRSGDYVVH+KVG+GRFVG++FDV KNS +PTEYV
Sbjct: 122 LQKLKG-DRE-SKDGVFSYKVDPYTLRSGDYVVHRKVGVGRFVGMRFDVAKNSSQPTEYV 179

Query: 845 FIEYADGMAKLPVKQASKM 901
           FIEYADGMAKLPV +A+KM
Sbjct: 180 FIEYADGMAKLPVNKAAKM 198


>ref|XP_003553316.1| PREDICTED: transcription-repair-coupling factor-like [Glycine max]
          Length = 823

 Score =  241 bits (615), Expect = 2e-61
 Identities = 134/203 (66%), Positives = 160/203 (78%)
 Frame = +2

Query: 293 ASLLPIPQHVIPSPLITNKLSSSPKTWSLFILNYPSLLHHNSNSKRQRHVPFSINAVYTQ 472
           +SLLP P   IP+PLI+ KL+SSP+TWSLFIL YPS    NSN+ + R +    NAVYTQ
Sbjct: 5   SSLLPRPH--IPTPLIS-KLTSSPRTWSLFILKYPSHPKTNSNNNK-RLILSPTNAVYTQ 60

Query: 473 GLYAPSPVPSSKTEKTEVDNDPISLVNERVRREYGKREVSLRTVMDSEEAEKYIKMVKEQ 652
             + PS  PS    KTE+ ND I+++NER+RR++ K+E + RTVMDSEEA KY++MVK Q
Sbjct: 61  SPHTPS-TPS----KTELHNDAITVLNERIRRDFSKKE-AFRTVMDSEEAGKYMQMVKVQ 114

Query: 653 QQRGLQKLKGVNREGAKDGAFSYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVPKNSDEP 832
           QQRGLQKLKG    G KDG FSYKVDPYTLRSGDYVVH+KVG+GRFVG++FDV KNS + 
Sbjct: 115 QQRGLQKLKG--DRGTKDGVFSYKVDPYTLRSGDYVVHRKVGVGRFVGMRFDVAKNSSQH 172

Query: 833 TEYVFIEYADGMAKLPVKQASKM 901
           TEYVFIEYADGMAKLPV QA+KM
Sbjct: 173 TEYVFIEYADGMAKLPVHQAAKM 195


>dbj|BAJ34179.1| unnamed protein product [Thellungiella halophila]
          Length = 823

 Score =  210 bits (534), Expect = 4e-52
 Identities = 123/207 (59%), Positives = 143/207 (69%), Gaps = 3/207 (1%)
 Frame = +2

Query: 290 MASLLPIPQHVIPSPLITNKLSSSPKTWSLFILNYPSLLHHNSNSKRQRHVPFSINAVYT 469
           M SLLP P  V  +PL+  KL S P    LF L   S   ++S          S+  V  
Sbjct: 1   MTSLLPNPDLVSTTPLVF-KLYSFPPPRRLFTLRRSSFARNSS----------SLPLVAV 49

Query: 470 QGLYAPSPVPSSKTEKTE-VDNDPISLVNERVRREYGKREVSLRTVMDSEEAEKYIKMVK 646
             L A +  P+   EK E  +ND ISL+NER+RR+ GKRE S R  MDSEEA+KYI+MVK
Sbjct: 50  SSLSATAAKPTRWREKQEFAENDSISLLNERIRRDLGKRETS-RPAMDSEEADKYIQMVK 108

Query: 647 EQQQRGLQKLKGVNR--EGAKDGAFSYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVPKN 820
           EQQ+RGLQKLKGV +  E    G FSYKVDPY+L SGDYVVHKKVGIGRFVGIKFDVPK+
Sbjct: 109 EQQERGLQKLKGVRQGTETGSGGGFSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKD 168

Query: 821 SDEPTEYVFIEYADGMAKLPVKQASKM 901
           S EP EYVFIEYADGMAKLP+KQAS++
Sbjct: 169 SSEPLEYVFIEYADGMAKLPLKQASRL 195


>ref|XP_002276313.1| PREDICTED: transcription-repair-coupling factor-like [Vitis
           vinifera]
          Length = 823

 Score =  204 bits (518), Expect = 3e-50
 Identities = 113/202 (55%), Positives = 140/202 (69%)
 Frame = +2

Query: 296 SLLPIPQHVIPSPLITNKLSSSPKTWSLFILNYPSLLHHNSNSKRQRHVPFSINAVYTQG 475
           S + + +H + S      L SSP+ W  F   +    H      R +       AVYT+G
Sbjct: 9   SPISVSEHDVSSSF----LGSSPRVWRFF---FACPCH-----ARIKRTHLLTTAVYTEG 56

Query: 476 LYAPSPVPSSKTEKTEVDNDPISLVNERVRREYGKREVSLRTVMDSEEAEKYIKMVKEQQ 655
           +     V   + E+ E ++D I+++NER+RRE  KR+VS   V+DSEEA+KYI++VKEQQ
Sbjct: 57  VSITRSV--QRRERMEPESDDITILNERIRREQSKRDVSRAPVVDSEEADKYIQLVKEQQ 114

Query: 656 QRGLQKLKGVNREGAKDGAFSYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVPKNSDEPT 835
           +RGLQKLKG  R G ++G FSYKVDPYTLRSGDYVVHKKVGIGRFVGIK DVPK+S  P 
Sbjct: 115 RRGLQKLKG-ERVGKENGQFSYKVDPYTLRSGDYVVHKKVGIGRFVGIKLDVPKDSSNPI 173

Query: 836 EYVFIEYADGMAKLPVKQASKM 901
           EYVFIEYADGMAKLPVKQAS+M
Sbjct: 174 EYVFIEYADGMAKLPVKQASRM 195


>ref|NP_566160.1| putative DEAD/DEAH box helicase [Arabidopsis thaliana]
           gi|332640233|gb|AEE73754.1| putative DEAD/DEAH box
           helicase [Arabidopsis thaliana]
          Length = 823

 Score =  203 bits (516), Expect = 5e-50
 Identities = 123/208 (59%), Positives = 144/208 (69%), Gaps = 4/208 (1%)
 Frame = +2

Query: 290 MASLLPIPQHVIPSPLITNKLSSSPKTWSLFILNYPSLLHHNSNSKRQRHVPFSINAVYT 469
           M SLLP P   I  PL+  KL S P    LF L        +S+          +  V  
Sbjct: 1   MMSLLPNPDP-ITVPLVL-KLCSFPPPRRLFSLRLRRFTRKSSSL---------LPLVAV 49

Query: 470 QGLYAPSPVPSSKTEKTEV-DNDPISLVNERVRREYGKREVSLRTVMDSEEAEKYIKMVK 646
             L A +  P+   EK E+ ++D ISL+NER+RR+ GKRE + R  MDSEEAEKYI MVK
Sbjct: 50  SSLSATAAKPTRWREKPELAESDSISLLNERIRRDLGKRETA-RPAMDSEEAEKYIHMVK 108

Query: 647 EQQQRGLQKLKGVNREGAK---DGAFSYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVPK 817
           EQQ+RGLQKLKG+ R+G K   DGAFSYKVDPY+L SGDYVVHKKVGIGRFVGIKFDVPK
Sbjct: 109 EQQERGLQKLKGI-RQGTKAAGDGAFSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPK 167

Query: 818 NSDEPTEYVFIEYADGMAKLPVKQASKM 901
           +S EP EYVFIEYADGMAKLP+KQAS++
Sbjct: 168 DSSEPLEYVFIEYADGMAKLPLKQASRL 195