BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006002
         (919 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540714.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-specifi...   486   e-135
ref|XP_003539065.1| PREDICTED: tRNA-specific 2-thiouridylase mnm...   473   e-131
ref|XP_004142116.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm...   444   e-122
emb|CBI16383.3| unnamed protein product [Vitis vinifera]              432   e-119
ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnm...   432   e-119

>ref|XP_003540714.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-specific 2-thiouridylase
           mnmA-like [Glycine max]
          Length = 467

 Score =  486 bits (1252), Expect = e-135
 Identities = 247/304 (81%), Positives = 263/304 (86%), Gaps = 7/304 (2%)
 Frame = +2

Query: 29  MSRVAVRWNW--RPLSSLPPAHFAPQKLHKLNPTPPRFPTLKKLFC----SAVAQTSPSL 190
           M +VAV WNW  RP++S P   F  Q LH LNP P R  + K LFC    SAVAQ SP L
Sbjct: 1   MWKVAVPWNWIWRPMASPPLTAFTCQNLHTLNPRP-RCRSFK-LFCRPSFSAVAQPSPPL 58

Query: 191 NVDPDTYLRCSMP-HKPLRVAVLVSGGVDSSVALRLLHAAGHSCIAFYLKIWFQEDFENY 367
           + D D YLRCSMP + PLRVAVLVSGGVDSSVALRLLHAAGHSC AFYLKIWFQEDFEN+
Sbjct: 59  SGDLDRYLRCSMPQNSPLRVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENF 118

Query: 368 WSECPWDEDLKYAKAVCNQVEVPLEVVHLTYEYWTNVVSYIIEEYRCGRTPNPDVLCNSR 547
           WSECPW+EDLKYAK VCNQV+VPLEVVHLT EYW NVVSY+IEEY  GRTPNPDVLCN+R
Sbjct: 119 WSECPWEEDLKYAKDVCNQVDVPLEVVHLTDEYWNNVVSYLIEEYSSGRTPNPDVLCNTR 178

Query: 548 IKFGAFLDAISGTGFDYVASGHYANVIHPSANQIDEPSVLELSQDMVKDQTYFLSHLSQS 727
           IKFGAFLDAI G GFDYVASGHYANVIHP A+ +DEPSVLELSQDMVKDQTYFLSHLSQS
Sbjct: 179 IKFGAFLDAIGGMGFDYVASGHYANVIHPCADWMDEPSVLELSQDMVKDQTYFLSHLSQS 238

Query: 728 QLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDSQGICFLGKIKFSEFVARHIGENEGII 907
           QL+RLLFPLGCIPKDEVR+LATKFDLPNKDRKDSQGICFLGKI+FSEFV RHIGE EGII
Sbjct: 239 QLRRLLFPLGCIPKDEVRKLATKFDLPNKDRKDSQGICFLGKIRFSEFVTRHIGEREGII 298

Query: 908 LEAE 919
           LEAE
Sbjct: 299 LEAE 302


>ref|XP_003539065.1| PREDICTED: tRNA-specific 2-thiouridylase mnmA-like [Glycine max]
          Length = 488

 Score =  473 bits (1218), Expect = e-131
 Identities = 238/290 (82%), Positives = 255/290 (87%), Gaps = 5/290 (1%)
 Frame = +2

Query: 65  LSSLPPAHFAPQKLHKLNPTPPRFPTLKKLFC----SAVAQTSPSLNVDPDTYLRCSMP- 229
           ++SLP   F  Q LH LNP P R  T K LFC    SAVA TSP L+ D D YLRCSMP 
Sbjct: 1   MASLPLTPFTCQNLHTLNPRP-RCRTFK-LFCRPSSSAVAHTSPPLSGDLDRYLRCSMPQ 58

Query: 230 HKPLRVAVLVSGGVDSSVALRLLHAAGHSCIAFYLKIWFQEDFENYWSECPWDEDLKYAK 409
           + PLRVAVLVSGGVDSSVALRLLHAAGHSC AFYLKIWFQEDFEN+WSECPW++DLKYAK
Sbjct: 59  NSPLRVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPWEDDLKYAK 118

Query: 410 AVCNQVEVPLEVVHLTYEYWTNVVSYIIEEYRCGRTPNPDVLCNSRIKFGAFLDAISGTG 589
            VCNQV+VPLEVVHLT EYW NVVSY+IEEY  GRTPNPDVLCN+RIKFGAFLDAI G G
Sbjct: 119 DVCNQVDVPLEVVHLTDEYWNNVVSYLIEEYSSGRTPNPDVLCNTRIKFGAFLDAIGGMG 178

Query: 590 FDYVASGHYANVIHPSANQIDEPSVLELSQDMVKDQTYFLSHLSQSQLKRLLFPLGCIPK 769
           FDYVASGHYANVIHP +++ DEPSVLELSQDMVKDQTYFLSHLSQSQLK+LLFPLGCIPK
Sbjct: 179 FDYVASGHYANVIHPCSDRRDEPSVLELSQDMVKDQTYFLSHLSQSQLKQLLFPLGCIPK 238

Query: 770 DEVRRLATKFDLPNKDRKDSQGICFLGKIKFSEFVARHIGENEGIILEAE 919
           DEVR+LATKFDLPNKDRKDSQGICFLGKI+FSEFVARHIGE EG+ILEAE
Sbjct: 239 DEVRKLATKFDLPNKDRKDSQGICFLGKIRFSEFVARHIGEREGVILEAE 288


>ref|XP_004142116.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA-like [Cucumis
           sativus] gi|449524848|ref|XP_004169433.1| PREDICTED:
           tRNA-specific 2-thiouridylase MnmA-like [Cucumis
           sativus]
          Length = 538

 Score =  444 bits (1141), Expect = e-122
 Identities = 224/295 (75%), Positives = 247/295 (83%), Gaps = 12/295 (4%)
 Frame = +2

Query: 71  SLPPAHFAPQKLHKLNPTP------PRFPTLKKLFCSAVAQTSPSLNVDPDT------YL 214
           S+P +HF    L      P      PR    +    SAV  TS S +  P +      +L
Sbjct: 14  SVPISHFTSLPLTPSILRPLLRRHNPRLFLTRFSASSAVHNTSLSSSSKPLSDADFLPFL 73

Query: 215 RCSMPHKPLRVAVLVSGGVDSSVALRLLHAAGHSCIAFYLKIWFQEDFENYWSECPWDED 394
            CSMP  PL+VAVL+SGGVDSSVALRLLHAAGHSC AFYLKIWFQEDFEN+WSECPWD+D
Sbjct: 74  SCSMPTYPLKVAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPWDDD 133

Query: 395 LKYAKAVCNQVEVPLEVVHLTYEYWTNVVSYIIEEYRCGRTPNPDVLCNSRIKFGAFLDA 574
           LKYAKAVC+QV+VPLEVVHLT EYW NVVSYIIEEYRCGRTPNPDVLCN+RIKFGAF+DA
Sbjct: 134 LKYAKAVCDQVDVPLEVVHLTEEYWRNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDA 193

Query: 575 ISGTGFDYVASGHYANVIHPSANQIDEPSVLELSQDMVKDQTYFLSHLSQSQLKRLLFPL 754
           IS   FDYVASGHYANVIHPSA+Q+D+PSVLELS+DMVKDQTYFLSHLSQ+QLKRLLFPL
Sbjct: 194 ISNMEFDYVASGHYANVIHPSADQMDKPSVLELSKDMVKDQTYFLSHLSQNQLKRLLFPL 253

Query: 755 GCIPKDEVRRLATKFDLPNKDRKDSQGICFLGKIKFSEFVARHIGENEGIILEAE 919
           GCIPKDEVR+LA KF+LPNKDRKDSQGICFLGKIKFSEFVARHIGE+EG+ILEAE
Sbjct: 254 GCIPKDEVRKLAAKFNLPNKDRKDSQGICFLGKIKFSEFVARHIGEDEGVILEAE 308


>emb|CBI16383.3| unnamed protein product [Vitis vinifera]
          Length = 544

 Score =  432 bits (1111), Expect = e-119
 Identities = 207/250 (82%), Positives = 226/250 (90%), Gaps = 2/250 (0%)
 Frame = +2

Query: 176 TSPS--LNVDPDTYLRCSMPHKPLRVAVLVSGGVDSSVALRLLHAAGHSCIAFYLKIWFQ 349
           T PS   N D   YL CS+P+  L++AVL+SGGVDSSVALRLLHAAGHSC AFYLKIWFQ
Sbjct: 65  TPPSNLFNADLQPYLSCSLPNNRLKIAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQ 124

Query: 350 EDFENYWSECPWDEDLKYAKAVCNQVEVPLEVVHLTYEYWTNVVSYIIEEYRCGRTPNPD 529
           EDFEN+WSECPW++DLKYAKAVC+QV+VPLEVVHLT EYW NVVSYIIEEYRCGRTPNPD
Sbjct: 125 EDFENFWSECPWEDDLKYAKAVCDQVDVPLEVVHLTDEYWKNVVSYIIEEYRCGRTPNPD 184

Query: 530 VLCNSRIKFGAFLDAISGTGFDYVASGHYANVIHPSANQIDEPSVLELSQDMVKDQTYFL 709
           VLCN+RIKFGAF+DAIS   FDYVASGHYANV+H   +Q+D+PSVLELS+DMVKDQTYFL
Sbjct: 185 VLCNTRIKFGAFMDAISSKEFDYVASGHYANVVHSFTDQMDKPSVLELSKDMVKDQTYFL 244

Query: 710 SHLSQSQLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDSQGICFLGKIKFSEFVARHIG 889
           SHLSQ QLKRL+FPLGCIPKDEVR LATK DLPN+DRKDSQGICFLGKIKFSEFVARHIG
Sbjct: 245 SHLSQIQLKRLIFPLGCIPKDEVRSLATKLDLPNRDRKDSQGICFLGKIKFSEFVARHIG 304

Query: 890 ENEGIILEAE 919
           E EGIILEAE
Sbjct: 305 EKEGIILEAE 314


>ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnmA-like [Vitis vinifera]
          Length = 540

 Score =  432 bits (1111), Expect = e-119
 Identities = 207/250 (82%), Positives = 226/250 (90%), Gaps = 2/250 (0%)
 Frame = +2

Query: 176 TSPS--LNVDPDTYLRCSMPHKPLRVAVLVSGGVDSSVALRLLHAAGHSCIAFYLKIWFQ 349
           T PS   N D   YL CS+P+  L++AVL+SGGVDSSVALRLLHAAGHSC AFYLKIWFQ
Sbjct: 61  TPPSNLFNADLQPYLSCSLPNNRLKIAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQ 120

Query: 350 EDFENYWSECPWDEDLKYAKAVCNQVEVPLEVVHLTYEYWTNVVSYIIEEYRCGRTPNPD 529
           EDFEN+WSECPW++DLKYAKAVC+QV+VPLEVVHLT EYW NVVSYIIEEYRCGRTPNPD
Sbjct: 121 EDFENFWSECPWEDDLKYAKAVCDQVDVPLEVVHLTDEYWKNVVSYIIEEYRCGRTPNPD 180

Query: 530 VLCNSRIKFGAFLDAISGTGFDYVASGHYANVIHPSANQIDEPSVLELSQDMVKDQTYFL 709
           VLCN+RIKFGAF+DAIS   FDYVASGHYANV+H   +Q+D+PSVLELS+DMVKDQTYFL
Sbjct: 181 VLCNTRIKFGAFMDAISSKEFDYVASGHYANVVHSFTDQMDKPSVLELSKDMVKDQTYFL 240

Query: 710 SHLSQSQLKRLLFPLGCIPKDEVRRLATKFDLPNKDRKDSQGICFLGKIKFSEFVARHIG 889
           SHLSQ QLKRL+FPLGCIPKDEVR LATK DLPN+DRKDSQGICFLGKIKFSEFVARHIG
Sbjct: 241 SHLSQIQLKRLIFPLGCIPKDEVRSLATKLDLPNRDRKDSQGICFLGKIKFSEFVARHIG 300

Query: 890 ENEGIILEAE 919
           E EGIILEAE
Sbjct: 301 EKEGIILEAE 310