BLASTX nr result

ID: Glycyrrhiza24_contig00005953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005953
         (1155 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625592.1| DEAD-box ATP-dependent RNA helicase [Medicag...   390   e-106
ref|XP_003554364.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   389   e-106
ref|XP_003521379.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   384   e-104
ref|XP_004137811.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   358   2e-96
emb|CBI32700.3| unnamed protein product [Vitis vinifera]              350   5e-94

>ref|XP_003625592.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355500607|gb|AES81810.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 619

 Score =  390 bits (1003), Expect = e-106
 Identities = 203/239 (84%), Positives = 212/239 (88%), Gaps = 2/239 (0%)
 Frame = -1

Query: 1155 ELFKQIDSIIKACSNPSIIRSLFSATLPDFVEDRARELMHDAVRVIVGRKNMASDTIKQK 976
            +LFKQIDSIIKAC+NPSIIRSLFSATLPDFVEDRARELMHDAVRVIVGRKNMASDTIKQK
Sbjct: 290  QLFKQIDSIIKACTNPSIIRSLFSATLPDFVEDRARELMHDAVRVIVGRKNMASDTIKQK 349

Query: 975  LVFTGSEEGKLLAIRQSFAESLNPPVLVFLQSKERAKELYGELAYDNIRVDVIHSDLSQE 796
            LVFTGSEEGKLLAIRQSFAESLNPPVLVFLQSKERAKELYGELA+DNIRVDVIHSDLSQE
Sbjct: 350  LVFTGSEEGKLLAIRQSFAESLNPPVLVFLQSKERAKELYGELAFDNIRVDVIHSDLSQE 409

Query: 795  ERENAVDNFRAGKTWVLIATDVVARGMDFKGVNCVINYDFPDSASAYVHXXXXXXXXXXX 616
            ERENAVDNFRAGKTWVLIATDVVARGMDFKG+NCVINYDFPDSASAY+H           
Sbjct: 410  ERENAVDNFRAGKTWVLIATDVVARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRS 469

Query: 615  XXXITFYTEEDIPFLRNVANLMAASGCEVPSWL--MELXXXXXXXXXXXRDSISTKPDL 445
               ITFYTEEDIPFLRNV+NLMA+SGCEVPSWL  ++L           RDSISTKPDL
Sbjct: 470  GEAITFYTEEDIPFLRNVSNLMASSGCEVPSWLTELQLQKKKWKKHRPDRDSISTKPDL 528


>ref|XP_003554364.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57-like [Glycine max]
          Length = 536

 Score =  389 bits (1000), Expect = e-106
 Identities = 203/237 (85%), Positives = 210/237 (88%)
 Frame = -1

Query: 1155 ELFKQIDSIIKACSNPSIIRSLFSATLPDFVEDRARELMHDAVRVIVGRKNMASDTIKQK 976
            ELFKQIDS+IKACSNPSIIRSLFSATLPDFVED+ARELMHDAVRVIVGRKNMAS+TIKQK
Sbjct: 300  ELFKQIDSVIKACSNPSIIRSLFSATLPDFVEDQARELMHDAVRVIVGRKNMASETIKQK 359

Query: 975  LVFTGSEEGKLLAIRQSFAESLNPPVLVFLQSKERAKELYGELAYDNIRVDVIHSDLSQE 796
            LVFTGSEEGKLLAIRQSFAESLNPPVLVFLQSKERAKELY ELA+DNIRVDVIHSDLSQ 
Sbjct: 360  LVFTGSEEGKLLAIRQSFAESLNPPVLVFLQSKERAKELYSELAFDNIRVDVIHSDLSQA 419

Query: 795  ERENAVDNFRAGKTWVLIATDVVARGMDFKGVNCVINYDFPDSASAYVHXXXXXXXXXXX 616
            ERENAVDNFRAGKTWVLIATDVVARGMDFKGVNCVINYDFPDSA+AYVH           
Sbjct: 420  ERENAVDNFRAGKTWVLIATDVVARGMDFKGVNCVINYDFPDSAAAYVHRIGRSGRAGRT 479

Query: 615  XXXITFYTEEDIPFLRNVANLMAASGCEVPSWLMELXXXXXXXXXXXRDSISTKPDL 445
               ITFYTE+DIPFLRNVANLMAASGCEVPS+LMEL           RDSISTKPDL
Sbjct: 480  GEAITFYTEDDIPFLRNVANLMAASGCEVPSYLMELRKKKWKKHRPKRDSISTKPDL 536


>ref|XP_003521379.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57-like [Glycine max]
          Length = 537

 Score =  384 bits (986), Expect = e-104
 Identities = 201/237 (84%), Positives = 209/237 (88%)
 Frame = -1

Query: 1155 ELFKQIDSIIKACSNPSIIRSLFSATLPDFVEDRARELMHDAVRVIVGRKNMASDTIKQK 976
            ELFKQIDS+IKACSNPSIIRSLFSATLPDFVEDRARELMHDAVRVIVGRKNMAS+TIKQK
Sbjct: 301  ELFKQIDSVIKACSNPSIIRSLFSATLPDFVEDRARELMHDAVRVIVGRKNMASETIKQK 360

Query: 975  LVFTGSEEGKLLAIRQSFAESLNPPVLVFLQSKERAKELYGELAYDNIRVDVIHSDLSQE 796
            LVFTGSEEGKLLAIRQSFAESLNPPVLVFLQSKERAKEL  ELA+D+IRVDVIHSDLSQ 
Sbjct: 361  LVFTGSEEGKLLAIRQSFAESLNPPVLVFLQSKERAKELCSELAFDSIRVDVIHSDLSQA 420

Query: 795  ERENAVDNFRAGKTWVLIATDVVARGMDFKGVNCVINYDFPDSASAYVHXXXXXXXXXXX 616
            ERENAVDNFRAGKTWVLIATDVVARGMDFKGVNCVINYDFPDSA+AYVH           
Sbjct: 421  ERENAVDNFRAGKTWVLIATDVVARGMDFKGVNCVINYDFPDSAAAYVHRIGRSGRAGRT 480

Query: 615  XXXITFYTEEDIPFLRNVANLMAASGCEVPSWLMELXXXXXXXXXXXRDSISTKPDL 445
               ITFYTE+DIPFLRNVANLMAASGCEVPS+LM+L           RDSISTKPDL
Sbjct: 481  GEAITFYTEDDIPFLRNVANLMAASGCEVPSYLMKLRKKKWKKHRPKRDSISTKPDL 537


>ref|XP_004137811.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57-like [Cucumis
            sativus]
          Length = 616

 Score =  358 bits (918), Expect = 2e-96
 Identities = 180/245 (73%), Positives = 203/245 (82%)
 Frame = -1

Query: 1152 LFKQIDSIIKACSNPSIIRSLFSATLPDFVEDRARELMHDAVRVIVGRKNMASDTIKQKL 973
            L KQID+++KACSNPSI+RSLFSATLPDFVED AR +MHDAVRVIVGRKN AS+T+KQKL
Sbjct: 296  LIKQIDAVVKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKL 355

Query: 972  VFTGSEEGKLLAIRQSFAESLNPPVLVFLQSKERAKELYGELAYDNIRVDVIHSDLSQEE 793
            VF GSEEGKLLA+RQSF+ESLNPPVL+F+QSKERAKELYGELA++NIRV VIHSDLSQ E
Sbjct: 356  VFAGSEEGKLLALRQSFSESLNPPVLIFVQSKERAKELYGELAFENIRVSVIHSDLSQLE 415

Query: 792  RENAVDNFRAGKTWVLIATDVVARGMDFKGVNCVINYDFPDSASAYVHXXXXXXXXXXXX 613
            REN VD+FRAGKTWVLIATDV++RGMDFKGVNCVINYDFPDSA+AY+H            
Sbjct: 416  RENVVDDFRAGKTWVLIATDVISRGMDFKGVNCVINYDFPDSAAAYIHRIGRSGRAGRSG 475

Query: 612  XXITFYTEEDIPFLRNVANLMAASGCEVPSWLMELXXXXXXXXXXXRDSISTKPDL*ATT 433
              ITFYT+EDIPFLRN+AN+M+ASGCEVPSW+ EL           RDSISTKP     T
Sbjct: 476  EAITFYTDEDIPFLRNIANVMSASGCEVPSWITELRKMKWKKHRPKRDSISTKPHEDGDT 535

Query: 432  ENGNK 418
            E   K
Sbjct: 536  EPPKK 540


>emb|CBI32700.3| unnamed protein product [Vitis vinifera]
          Length = 523

 Score =  350 bits (897), Expect = 5e-94
 Identities = 173/234 (73%), Positives = 198/234 (84%)
 Frame = -1

Query: 1152 LFKQIDSIIKACSNPSIIRSLFSATLPDFVEDRARELMHDAVRVIVGRKNMASDTIKQKL 973
            L KQID+++KACSNPSIIRSLFSATLPDFVE+ AR +MHDAVRVI+GRKN AS+ IKQKL
Sbjct: 285  LVKQIDAVVKACSNPSIIRSLFSATLPDFVEELARTIMHDAVRVIIGRKNSASELIKQKL 344

Query: 972  VFTGSEEGKLLAIRQSFAESLNPPVLVFLQSKERAKELYGELAYDNIRVDVIHSDLSQEE 793
            VF GSEEGKLLA+RQSFAESLNPP+L+F+QSKERAKELY ELA+D+IRVDVIH+DLSQ +
Sbjct: 345  VFAGSEEGKLLALRQSFAESLNPPILLFVQSKERAKELYTELAFDDIRVDVIHADLSQSQ 404

Query: 792  RENAVDNFRAGKTWVLIATDVVARGMDFKGVNCVINYDFPDSASAYVHXXXXXXXXXXXX 613
            RENAVD+FRAGKTWVLIATDV+ARGMDFKG+NCVINYDFPDS +AY+H            
Sbjct: 405  RENAVDDFRAGKTWVLIATDVIARGMDFKGINCVINYDFPDSPAAYIHRIGRSGRAGRTG 464

Query: 612  XXITFYTEEDIPFLRNVANLMAASGCEVPSWLMELXXXXXXXXXXXRDSISTKP 451
              IT YTE+D+PFLRN+AN+MAASGCEVPSW+M L           RDSISTKP
Sbjct: 465  EAITIYTEDDVPFLRNIANVMAASGCEVPSWIMALPKLKWKKHRPQRDSISTKP 518


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