BLASTX nr result

ID: Glycyrrhiza24_contig00005936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005936
         (1450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240116.1| uncharacterized protein LOC100789593 [Glycin...   464   e-128
ref|NP_001242639.1| uncharacterized protein LOC100808123 [Glycin...   447   e-123
ref|XP_002268835.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...   419   e-115
ref|XP_004144419.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...   413   e-113
ref|XP_002513323.1| membrane associated ring finger 1,8, putativ...   411   e-112

>ref|NP_001240116.1| uncharacterized protein LOC100789593 [Glycine max]
            gi|255638130|gb|ACU19379.1| unknown [Glycine max]
          Length = 257

 Score =  464 bits (1195), Expect = e-128
 Identities = 231/263 (87%), Positives = 237/263 (90%), Gaps = 3/263 (1%)
 Frame = -1

Query: 1153 MQLASNNDRXXXXXXXXSQPILNPQPSSDP---ESSFSCEIIPARLDFAAANNDGDLQNV 983
            MQLASN D+         +PILN      P   ESSFSCEIIP     AAA+ D DLQNV
Sbjct: 1    MQLASNGDKEECSES---EPILNHHHLHLPPPGESSFSCEIIPIS---AAASGDDDLQNV 54

Query: 982  RVDETCHLVNADQPQCRICLDIGGEDIIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFSHC 803
            RVDETCHLVNADQPQCRICLDIGGED+IAPCHCKGTQKYVHRSCLDNWRSTKEGFAFSHC
Sbjct: 55   RVDETCHLVNADQPQCRICLDIGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFSHC 114

Query: 802  TECKAVFILRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLVVAFLGVLVYKFYGDELRE 623
            TEC+AVFILRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLVVAFLGVLVYKFYGDELRE
Sbjct: 115  TECRAVFILRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLVVAFLGVLVYKFYGDELRE 174

Query: 622  MFGYEEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDR 443
            MFGYEEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDR
Sbjct: 175  MFGYEEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDR 234

Query: 442  DHVKNVPELDPSHVTELRMLGLY 374
            +HVKNVPELDPSHVTELRMLGLY
Sbjct: 235  EHVKNVPELDPSHVTELRMLGLY 257


>ref|NP_001242639.1| uncharacterized protein LOC100808123 [Glycine max]
            gi|255639405|gb|ACU19998.1| unknown [Glycine max]
          Length = 273

 Score =  447 bits (1150), Expect = e-123
 Identities = 229/279 (82%), Positives = 235/279 (84%), Gaps = 19/279 (6%)
 Frame = -1

Query: 1153 MQLASNNDRXXXXXXXXSQPILNP-----QPSSDPESSFSCEIIPARLDFAAANNDGDLQ 989
            MQLASN D+         +PILN      QP+   ESSFSCEIIP     AA  ND DLQ
Sbjct: 1    MQLASNGDKEECSES---EPILNHHHLHLQPTG--ESSFSCEIIPIP-PAAATFNDDDLQ 54

Query: 988  NVRVDETCHLVNADQPQCRICLDIGGEDIIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFS 809
            NVRV ETCHLVNADQPQCRICLDIGGED+IAPCHCKGTQKYVHRSCLDNWRSTKEGFAFS
Sbjct: 55   NVRVGETCHLVNADQPQCRICLDIGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFS 114

Query: 808  HCTECKAVFILRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLVVAFLGVLVYKFYGDEL 629
            HCTEC+AVFILRANVPPDRWWLR KFQFLVARDHAFIFIIVQLVVAFLGVLVYKFYGDEL
Sbjct: 115  HCTECRAVFILRANVPPDRWWLRFKFQFLVARDHAFIFIIVQLVVAFLGVLVYKFYGDEL 174

Query: 628  REMFGYEEHPYGFYTMA--------------VLAIVLVGLLYGFFIAIICGQRINERHYH 491
            REMFGYEEHPYGFYTMA               LAIVLVGLLYGFFIAIICGQRINERHYH
Sbjct: 175  REMFGYEEHPYGFYTMAGIYPWLPRKKIHGQFLAIVLVGLLYGFFIAIICGQRINERHYH 234

Query: 490  VLAKQELTKEYVVEDRDHVKNVPELDPSHVTELRMLGLY 374
            VLAKQELTKEYVVEDR+HVKNVPELDPSHVTELRMLGLY
Sbjct: 235  VLAKQELTKEYVVEDREHVKNVPELDPSHVTELRMLGLY 273


>ref|XP_002268835.1| PREDICTED: E3 ubiquitin-protein ligase MARCH1 [Vitis vinifera]
            gi|297735744|emb|CBI18431.3| unnamed protein product
            [Vitis vinifera]
          Length = 258

 Score =  419 bits (1077), Expect = e-115
 Identities = 199/230 (86%), Positives = 213/230 (92%)
 Frame = -1

Query: 1063 ESSFSCEIIPARLDFAAANNDGDLQNVRVDETCHLVNADQPQCRICLDIGGEDIIAPCHC 884
            ESS SCEI    +D +    DGDL+N+  DE C LVNADQPQCRICLDIGGED+IAPCHC
Sbjct: 31   ESSTSCEIRTVEVDCSIV--DGDLENLDTDENCALVNADQPQCRICLDIGGEDLIAPCHC 88

Query: 883  KGTQKYVHRSCLDNWRSTKEGFAFSHCTECKAVFILRANVPPDRWWLRLKFQFLVARDHA 704
            +GTQKYVHRSCLDNWRSTKEGFAF+HCTEC+AVFILRANVPPDRWWLRLKFQ LVARDHA
Sbjct: 89   RGTQKYVHRSCLDNWRSTKEGFAFAHCTECRAVFILRANVPPDRWWLRLKFQLLVARDHA 148

Query: 703  FIFIIVQLVVAFLGVLVYKFYGDELREMFGYEEHPYGFYTMAVLAIVLVGLLYGFFIAII 524
            FIF+IVQL+VAFLGVLVYKFYG+ELREMFGY+EHPYGFYTMAVLAIVLVGLLYGFFIAII
Sbjct: 149  FIFVIVQLIVAFLGVLVYKFYGEELREMFGYDEHPYGFYTMAVLAIVLVGLLYGFFIAII 208

Query: 523  CGQRINERHYHVLAKQELTKEYVVEDRDHVKNVPELDPSHVTELRMLGLY 374
            CGQRINERHYHVLAKQELTKEYVVEDR+  K+VPELDPSHVTELRMLGLY
Sbjct: 209  CGQRINERHYHVLAKQELTKEYVVEDREVNKDVPELDPSHVTELRMLGLY 258


>ref|XP_004144419.1| PREDICTED: E3 ubiquitin-protein ligase MARCH1-like [Cucumis sativus]
            gi|449519260|ref|XP_004166653.1| PREDICTED: E3
            ubiquitin-protein ligase MARCH1-like [Cucumis sativus]
          Length = 261

 Score =  413 bits (1061), Expect = e-113
 Identities = 203/265 (76%), Positives = 222/265 (83%), Gaps = 5/265 (1%)
 Frame = -1

Query: 1153 MQLASNNDRXXXXXXXXSQPILN-----PQPSSDPESSFSCEIIPARLDFAAANNDGDLQ 989
            MQL  N+D         + PIL+     PQ      S+   EII    + + +  D DL 
Sbjct: 1    MQLVPNHDENKDDILERA-PILSQLDFLPQSVGSSSSAEIAEIIAIGRESSVS--DDDLH 57

Query: 988  NVRVDETCHLVNADQPQCRICLDIGGEDIIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFS 809
            N  +DETCHLVN DQPQCRICLD GGED+IAPCHCKGTQKYVHRSCLDNWRSTKEGFAF+
Sbjct: 58   NPNIDETCHLVN-DQPQCRICLDTGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFA 116

Query: 808  HCTECKAVFILRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLVVAFLGVLVYKFYGDEL 629
            HCTEC+A+F+LRANVPPDRWWLRLKFQFLVARDHAFIFIIVQL+VAFLGVLVYKFYG+EL
Sbjct: 117  HCTECRAMFVLRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEEL 176

Query: 628  REMFGYEEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVE 449
            REMFGYEEHPYGFY MAVLAI+LVGLLYGFFIAIICGQRINERHYHVLAKQELTKEY+VE
Sbjct: 177  REMFGYEEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVE 236

Query: 448  DRDHVKNVPELDPSHVTELRMLGLY 374
            DR+H KNVPELDPSHV ELR+LGLY
Sbjct: 237  DREHNKNVPELDPSHVMELRLLGLY 261


>ref|XP_002513323.1| membrane associated ring finger 1,8, putative [Ricinus communis]
            gi|223547231|gb|EEF48726.1| membrane associated ring
            finger 1,8, putative [Ricinus communis]
          Length = 256

 Score =  411 bits (1056), Expect = e-112
 Identities = 204/263 (77%), Positives = 220/263 (83%), Gaps = 3/263 (1%)
 Frame = -1

Query: 1153 MQLASNNDRXXXXXXXXSQPILNPQP--SSDPESSFSCEIIPARLDFAAANNDGD-LQNV 983
            MQL SN+ +         +PIL          ESS SCEI     D      DGD L++V
Sbjct: 1    MQLVSNDSQKEDISER--EPILRQSNIVQRSEESSSSCEITSIGQDC-----DGDDLESV 53

Query: 982  RVDETCHLVNADQPQCRICLDIGGEDIIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFSHC 803
             VDETCHLVN DQPQCRICLD GGED+IAPCHCKGTQKYVHRSCLDNWRSTKEGFAF+HC
Sbjct: 54   HVDETCHLVNPDQPQCRICLDNGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFAHC 113

Query: 802  TECKAVFILRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLVVAFLGVLVYKFYGDELRE 623
            TEC+A FILRANVPPDRWWLRLKFQFLVARDH FIF++VQL+VAFLG+ VYKFYG+ELRE
Sbjct: 114  TECRASFILRANVPPDRWWLRLKFQFLVARDHVFIFVVVQLIVAFLGMFVYKFYGEELRE 173

Query: 622  MFGYEEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDR 443
            MFGYEEHPYGFYT+AVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDR
Sbjct: 174  MFGYEEHPYGFYTVAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDR 233

Query: 442  DHVKNVPELDPSHVTELRMLGLY 374
            +  KNVPELD +HVTELRMLGLY
Sbjct: 234  EASKNVPELDATHVTELRMLGLY 256


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