BLASTX nr result

ID: Glycyrrhiza24_contig00005921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005921
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535051.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   207   9e-52
ref|XP_003546242.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   201   7e-50
ref|XP_002515824.1| Protein SEY1, putative [Ricinus communis] gi...   175   4e-42
ref|NP_199329.1| Root hair defective 3 GTP-binding protein (RHD3...   162   3e-38
ref|XP_002865275.1| root hair defective 3 GTP-binding family pro...   160   8e-38

>ref|XP_003535051.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 2-like [Glycine
           max]
          Length = 829

 Score =  207 bits (526), Expect = 9e-52
 Identities = 103/127 (81%), Positives = 113/127 (88%)
 Frame = +2

Query: 2   FKTKLDESLNNGEGFASSVRMWTQSIMLEFDKRSADAAVRQANWSASKVRDKLRRDIDSH 181
           FKTKL++SLNNGEGFASSVR WTQS MLEFDK SADAA+RQANW ASKVRDKL RDIDSH
Sbjct: 384 FKTKLEQSLNNGEGFASSVRTWTQSTMLEFDKASADAAIRQANWGASKVRDKLHRDIDSH 443

Query: 182 ASSICSAKLSEIMTKFEKQLARALTEPVESLFEEGGKDTWHSIRKLLKRETETAVAEFLD 361
            SS+CSAKL EI T FEK+LA+AL EPVESLFE GGKD+W SIR+LLKRETETAV+EF  
Sbjct: 444 TSSVCSAKLLEITTNFEKKLAKALAEPVESLFEAGGKDSWLSIRELLKRETETAVSEFSA 503

Query: 362 SIAGFEL 382
           S+AGFEL
Sbjct: 504 SVAGFEL 510


>ref|XP_003546242.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 2-like [Glycine
           max]
          Length = 829

 Score =  201 bits (510), Expect = 7e-50
 Identities = 102/127 (80%), Positives = 111/127 (87%)
 Frame = +2

Query: 2   FKTKLDESLNNGEGFASSVRMWTQSIMLEFDKRSADAAVRQANWSASKVRDKLRRDIDSH 181
           FKTKL++SLNNGEGFASSVR WTQS ML+FDK SADAAVRQANW ASKVRDKL RDIDSH
Sbjct: 384 FKTKLEQSLNNGEGFASSVRTWTQSTMLQFDKASADAAVRQANWGASKVRDKLHRDIDSH 443

Query: 182 ASSICSAKLSEIMTKFEKQLARALTEPVESLFEEGGKDTWHSIRKLLKRETETAVAEFLD 361
            SS+ S KLSEI   FEK+LA+ALTEPVESLFE GGKDTW SIR+LLKRETE AV+EF  
Sbjct: 444 TSSMRSTKLSEITANFEKKLAKALTEPVESLFEAGGKDTWLSIRELLKRETEIAVSEFSA 503

Query: 362 SIAGFEL 382
           S+AGFEL
Sbjct: 504 SVAGFEL 510


>ref|XP_002515824.1| Protein SEY1, putative [Ricinus communis]
           gi|223545053|gb|EEF46566.1| Protein SEY1, putative
           [Ricinus communis]
          Length = 779

 Score =  175 bits (443), Expect = 4e-42
 Identities = 87/127 (68%), Positives = 107/127 (84%)
 Frame = +2

Query: 2   FKTKLDESLNNGEGFASSVRMWTQSIMLEFDKRSADAAVRQANWSASKVRDKLRRDIDSH 181
           FKT L++SL +GEGFA+SVR   QS MLEF++  ADAAVRQA+W  SKVR+KLRRDI++H
Sbjct: 383 FKTSLEQSLKSGEGFAASVRTCGQSCMLEFERGYADAAVRQADWDTSKVREKLRRDIEAH 442

Query: 182 ASSICSAKLSEIMTKFEKQLARALTEPVESLFEEGGKDTWHSIRKLLKRETETAVAEFLD 361
           ASS CS+KLSE++ K+EKQLA ALTEPVESLFE GGKDTW SIR LL+++TE AV+EF  
Sbjct: 443 ASSECSSKLSEMINKYEKQLAEALTEPVESLFEAGGKDTWASIRMLLQQQTEVAVSEFAT 502

Query: 362 SIAGFEL 382
           ++A FEL
Sbjct: 503 AVASFEL 509


>ref|NP_199329.1| Root hair defective 3 GTP-binding protein (RHD3) [Arabidopsis
           thaliana] gi|75171237|sp|Q9FKE9.1|RD3H2_ARATH RecName:
           Full=Protein ROOT HAIR DEFECTIVE 3 homolog 2; AltName:
           Full=Protein SEY1 homolog 3 gi|9759601|dbj|BAB11389.1|
           GTP-binding protein-like; root hair defective 3
           protein-like [Arabidopsis thaliana]
           gi|332007828|gb|AED95211.1| Root hair defective 3
           GTP-binding protein (RHD3) [Arabidopsis thaliana]
          Length = 834

 Score =  162 bits (409), Expect = 3e-38
 Identities = 81/127 (63%), Positives = 99/127 (77%)
 Frame = +2

Query: 2   FKTKLDESLNNGEGFASSVRMWTQSIMLEFDKRSADAAVRQANWSASKVRDKLRRDIDSH 181
           FK +L++SLN GEGFA +VR   QS ++ FDK   DAAV+QA W ASK+R+KL RDID+H
Sbjct: 385 FKIRLEQSLNQGEGFAKAVRDSQQSCLMVFDKGCEDAAVKQATWDASKIREKLCRDIDAH 444

Query: 182 ASSICSAKLSEIMTKFEKQLARALTEPVESLFEEGGKDTWHSIRKLLKRETETAVAEFLD 361
                SAKLSE+   +EK+L +AL+EPVESLFE GGK+TW SIRKLLKRETETAV +FLD
Sbjct: 445 TFFARSAKLSELTANYEKRLTQALSEPVESLFEAGGKETWPSIRKLLKRETETAVTDFLD 504

Query: 362 SIAGFEL 382
            + GFEL
Sbjct: 505 VVTGFEL 511


>ref|XP_002865275.1| root hair defective 3 GTP-binding family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297311110|gb|EFH41534.1| root
           hair defective 3 GTP-binding family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 833

 Score =  160 bits (406), Expect = 8e-38
 Identities = 80/127 (62%), Positives = 99/127 (77%)
 Frame = +2

Query: 2   FKTKLDESLNNGEGFASSVRMWTQSIMLEFDKRSADAAVRQANWSASKVRDKLRRDIDSH 181
           FK +L++SLN GEGFA +VR   Q  ++ FDK   DA V+QA W ASK+R+KL RDID+H
Sbjct: 385 FKIQLEQSLNQGEGFAKAVRDSQQYCLIVFDKGCEDAKVKQATWDASKIREKLCRDIDAH 444

Query: 182 ASSICSAKLSEIMTKFEKQLARALTEPVESLFEEGGKDTWHSIRKLLKRETETAVAEFLD 361
            SS  +AKLSE+   +EK+L +AL+EPVESLFE GGK+TW SIRKLLKRETETAV +FLD
Sbjct: 445 TSSARTAKLSELTANYEKRLTQALSEPVESLFEAGGKETWPSIRKLLKRETETAVTDFLD 504

Query: 362 SIAGFEL 382
            + GFEL
Sbjct: 505 VVTGFEL 511


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