BLASTX nr result

ID: Glycyrrhiza24_contig00005911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005911
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146980.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   153   1e-35
gb|ACJ84802.1| unknown [Medicago truncatula]                          153   1e-35
ref|XP_003554255.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   153   2e-35
ref|XP_003521247.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   151   6e-35
ref|XP_002520726.1| potassium channel regulatory factor, putativ...   149   2e-34

>ref|XP_004146980.1| PREDICTED: pre-mRNA-splicing factor 18-like [Cucumis sativus]
           gi|449491488|ref|XP_004158914.1| PREDICTED:
           pre-mRNA-splicing factor 18-like [Cucumis sativus]
          Length = 420

 Score =  153 bits (387), Expect = 1e-35
 Identities = 74/83 (89%), Positives = 82/83 (98%)
 Frame = +1

Query: 46  LPDEKNIDNLVLPKQEVVRRLRFLKQPVTLFGEDDDARLDRLKYVLKAGLFEVDSDMTEG 225
           L DE+NIDNLVLP+QEV+RRLRFLKQP+TLFGEDDDARLDRLK+VLKAGLFEVDSD+TEG
Sbjct: 95  LTDEQNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEG 154

Query: 226 QTNDFLRDIAELRKRQKTGILTD 294
           QTNDFLRDIAELRKRQKTGIL++
Sbjct: 155 QTNDFLRDIAELRKRQKTGILSE 177


>gb|ACJ84802.1| unknown [Medicago truncatula]
          Length = 268

 Score =  153 bits (387), Expect = 1e-35
 Identities = 76/83 (91%), Positives = 80/83 (96%)
 Frame = +1

Query: 46  LPDEKNIDNLVLPKQEVVRRLRFLKQPVTLFGEDDDARLDRLKYVLKAGLFEVDSDMTEG 225
           LPDE+NI +LVLPKQEV+RRLRFLKQPVTLFGEDDD RLDRLKYVLKAGLFEVDSDMT G
Sbjct: 86  LPDEQNIGSLVLPKQEVIRRLRFLKQPVTLFGEDDDVRLDRLKYVLKAGLFEVDSDMTGG 145

Query: 226 QTNDFLRDIAELRKRQKTGILTD 294
           QTNDFLRDIAELRKRQKTGIL+D
Sbjct: 146 QTNDFLRDIAELRKRQKTGILSD 168


>ref|XP_003554255.1| PREDICTED: pre-mRNA-splicing factor 18-like [Glycine max]
          Length = 411

 Score =  153 bits (386), Expect = 2e-35
 Identities = 76/81 (93%), Positives = 79/81 (97%)
 Frame = +1

Query: 46  LPDEKNIDNLVLPKQEVVRRLRFLKQPVTLFGEDDDARLDRLKYVLKAGLFEVDSDMTEG 225
           L DE+NIDNLVLPK EV+RRLRFLKQPVTLFGEDDDARLDRLKYVLKAG+FEVDSDMTEG
Sbjct: 86  LTDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKYVLKAGVFEVDSDMTEG 145

Query: 226 QTNDFLRDIAELRKRQKTGIL 288
           QTNDFLRDIAELRKRQKTGIL
Sbjct: 146 QTNDFLRDIAELRKRQKTGIL 166


>ref|XP_003521247.1| PREDICTED: pre-mRNA-splicing factor 18-like [Glycine max]
          Length = 413

 Score =  151 bits (381), Expect = 6e-35
 Identities = 75/81 (92%), Positives = 79/81 (97%)
 Frame = +1

Query: 46  LPDEKNIDNLVLPKQEVVRRLRFLKQPVTLFGEDDDARLDRLKYVLKAGLFEVDSDMTEG 225
           L +E+NIDNLVLPK EV+RRLRFLKQPVTLFGEDDDARLDRLKYVLKAG+FEVDSDMTEG
Sbjct: 87  LTNEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKYVLKAGVFEVDSDMTEG 146

Query: 226 QTNDFLRDIAELRKRQKTGIL 288
           QTNDFLRDIAELRKRQKTGIL
Sbjct: 147 QTNDFLRDIAELRKRQKTGIL 167


>ref|XP_002520726.1| potassium channel regulatory factor, putative [Ricinus communis]
           gi|223540111|gb|EEF41688.1| potassium channel regulatory
           factor, putative [Ricinus communis]
          Length = 417

 Score =  149 bits (377), Expect = 2e-34
 Identities = 71/83 (85%), Positives = 82/83 (98%)
 Frame = +1

Query: 46  LPDEKNIDNLVLPKQEVVRRLRFLKQPVTLFGEDDDARLDRLKYVLKAGLFEVDSDMTEG 225
           L +E+NIDNL+LPKQEV+RRLRFLKQP+TLFGEDDDARLDRLK+VLKAG+FEVDSDMTEG
Sbjct: 91  LTNEQNIDNLILPKQEVIRRLRFLKQPITLFGEDDDARLDRLKHVLKAGIFEVDSDMTEG 150

Query: 226 QTNDFLRDIAELRKRQKTGILTD 294
           QTNDFLRDIAELRKRQK+GI+++
Sbjct: 151 QTNDFLRDIAELRKRQKSGIVSE 173


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