BLASTX nr result

ID: Glycyrrhiza24_contig00005863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005863
         (788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590400.1| 60S ribosomal protein L24 [Medicago truncatu...   232   8e-59
gb|AFK43072.1| unknown [Lotus japonicus]                              229   7e-58
ref|XP_004143295.1| PREDICTED: 60S ribosomal protein L24-like [C...   228   1e-57
gb|AFK40850.1| unknown [Medicago truncatula]                          228   1e-57
gb|ACJ83918.1| unknown [Medicago truncatula] gi|388504044|gb|AFK...   226   4e-57

>ref|XP_003590400.1| 60S ribosomal protein L24 [Medicago truncatula]
           gi|92870918|gb|ABE80118.1| Ribosomal protein L24E
           [Medicago truncatula] gi|355479448|gb|AES60651.1| 60S
           ribosomal protein L24 [Medicago truncatula]
           gi|388498714|gb|AFK37423.1| unknown [Medicago
           truncatula]
          Length = 163

 Score =  232 bits (591), Expect = 8e-59
 Identities = 121/146 (82%), Positives = 123/146 (84%)
 Frame = -3

Query: 738 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMYRKQ 559
           MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHN+LKPSKLTWTAMYRKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNKLKPSKLTWTAMYRKQ 60

Query: 558 HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREIXXXXX 379
           HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREI     
Sbjct: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREIKERVK 120

Query: 378 XXXXXXXXXXXXXXXXXXKSLGKGNV 301
                             KS+GKGNV
Sbjct: 121 KTKDEKKAKKAESQAKAQKSVGKGNV 146


>gb|AFK43072.1| unknown [Lotus japonicus]
          Length = 164

 Score =  229 bits (583), Expect = 7e-58
 Identities = 120/146 (82%), Positives = 121/146 (82%)
 Frame = -3

Query: 738 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMYRKQ 559
           MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCK YFHNRLKPSKLTWTAMYRKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKHYFHNRLKPSKLTWTAMYRKQ 60

Query: 558 HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREIXXXXX 379
           HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKR+EKPEVRDAAREAALREI     
Sbjct: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIK 120

Query: 378 XXXXXXXXXXXXXXXXXXKSLGKGNV 301
                             KS GKGNV
Sbjct: 121 KTKDEKKAKKAETTAKSQKSQGKGNV 146


>ref|XP_004143295.1| PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus]
           gi|449523211|ref|XP_004168617.1| PREDICTED: 60S
           ribosomal protein L24-like [Cucumis sativus]
          Length = 164

 Score =  228 bits (580), Expect = 1e-57
 Identities = 118/146 (80%), Positives = 121/146 (82%)
 Frame = -3

Query: 738 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMYRKQ 559
           MVLKTELCRFSGAKIYPGRGIRF+R+DSQVFLF NSKCKRYFHNRLKPSKLTWTAMYRKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGRGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60

Query: 558 HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREIXXXXX 379
           HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREI     
Sbjct: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREIKERIK 120

Query: 378 XXXXXXXXXXXXXXXXXXKSLGKGNV 301
                             K+ GKGNV
Sbjct: 121 KTKDEKKAKKAEVMAKTQKTQGKGNV 146


>gb|AFK40850.1| unknown [Medicago truncatula]
          Length = 163

 Score =  228 bits (580), Expect = 1e-57
 Identities = 113/115 (98%), Positives = 115/115 (100%)
 Frame = -3

Query: 738 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMYRKQ 559
           MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHN+LKPSKLTWTAMYRKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNKLKPSKLTWTAMYRKQ 60

Query: 558 HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREI 394
           HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKR+EKPEVRDAAREAALREI
Sbjct: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREI 115


>gb|ACJ83918.1| unknown [Medicago truncatula] gi|388504044|gb|AFK40088.1| unknown
           [Medicago truncatula]
          Length = 153

 Score =  226 bits (576), Expect = 4e-57
 Identities = 112/115 (97%), Positives = 114/115 (99%)
 Frame = -3

Query: 738 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMYRKQ 559
           MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHN+LKPSKLTWTAMYRKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNKLKPSKLTWTAMYRKQ 60

Query: 558 HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREI 394
           HKKDIAQEAVKKRRRATKKPYSRSIVG TLEVIQKKR+EKPEVRDAAREAALREI
Sbjct: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGTTLEVIQKKRTEKPEVRDAAREAALREI 115


Top