BLASTX nr result

ID: Glycyrrhiza24_contig00005846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005846
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594068.1| G1121 protein [Medicago truncatula] gi|35548...   136   2e-30
ref|XP_003541643.1| PREDICTED: uncharacterized protein LOC100817...    96   2e-18
ref|XP_003547226.1| PREDICTED: uncharacterized protein LOC100777...    92   3e-17
ref|XP_002516820.1| 80 kD MCM3-associated protein, putative [Ric...    80   2e-13
emb|CBI26153.3| unnamed protein product [Vitis vinifera]               70   2e-10

>ref|XP_003594068.1| G1121 protein [Medicago truncatula] gi|355483116|gb|AES64319.1|
           G1121 protein [Medicago truncatula]
          Length = 1564

 Score =  136 bits (342), Expect = 2e-30
 Identities = 86/189 (45%), Positives = 102/189 (53%), Gaps = 42/189 (22%)
 Frame = -2

Query: 445 SDGQKLLYKDLDAQTPERPPSVTTFIALRDSMTGVTAQVSRFPNPERSRSPPISYADVD- 269
           +D Q L +K L  Q  +R  S TT +A R S TGVTA+V R P+ ER+RSPPISYAD+D 
Sbjct: 44  NDAQNLFHKGLGPQPSQRRTSATTLVASRGSATGVTAKVYRSPHLERNRSPPISYADIDD 103

Query: 268 --------------------------------GXXXXXXXXXXXLSDDHGHLLPLKSQPP 185
                                                       L+++HGHLLPLKSQ P
Sbjct: 104 SMTGVTARVYTSPRERTRSPISYADIDDLRDPSQTVLKNNPPNLLTEEHGHLLPLKSQSP 163

Query: 184 PLVPVNHQ-SFRNFQGPSISVQ--------QPALARSTLDSQASLPVNYPNFSVRPVQPS 32
           PLVP+NHQ S +NFQGPSI +Q         P LA STLD QA L VN  NFS+ P+Q  
Sbjct: 164 PLVPLNHQSSVQNFQGPSIPIQHHYFLDGGMPTLAPSTLDGQARLSVN-SNFSIHPIQSP 222

Query: 31  VSPYIGSQN 5
           VSPYI SQN
Sbjct: 223 VSPYIDSQN 231


>ref|XP_003541643.1| PREDICTED: uncharacterized protein LOC100817727 [Glycine max]
          Length = 1869

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/59 (76%), Positives = 50/59 (84%)
 Frame = -2

Query: 445 SDGQKLLYKDLDAQTPERPPSVTTFIALRDSMTGVTAQVSRFPNPERSRSPPISYADVD 269
           SDGQKLLYKDL    PERP  VTTFIA  DS TGVTA++SRFPNPER+RSPPISY+D+D
Sbjct: 411 SDGQKLLYKDLGTHIPERPSPVTTFIATHDSTTGVTARISRFPNPERTRSPPISYSDLD 469



 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 53/136 (38%), Positives = 76/136 (55%), Gaps = 11/136 (8%)
 Frame = -2

Query: 424 YKDLDAQTPERPPSVTTFIALRDSMTGVTAQVSRFPNPERSRSPPISYA--DVDGXXXXX 251
           Y DLD  TPERP  VTTFIA RDS TGVTA++SRFPNPE++RSPPISYA  D+D      
Sbjct: 465 YSDLDTDTPERPSPVTTFIASRDSATGVTARISRFPNPEKTRSPPISYADLDIDTPERPS 524

Query: 250 XXXXXXLSDDHGHLL---------PLKSQPPPLVPVNHQSFRNFQGPSISVQQPALARST 98
                  S D    +         P +++ PP+   + ++ RN    ++   +P+L+   
Sbjct: 525 PVTTFIASRDTATGVTTRISRFPNPERTRSPPISYADVEALRN-SDQTVLRNKPSLSPPR 583

Query: 97  LDSQASLPVNYPNFSV 50
           L S +++P   P+  +
Sbjct: 584 LGSTSNVPRTVPHSQI 599


>ref|XP_003547226.1| PREDICTED: uncharacterized protein LOC100777150 [Glycine max]
          Length = 1556

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/59 (74%), Positives = 48/59 (81%)
 Frame = -2

Query: 445 SDGQKLLYKDLDAQTPERPPSVTTFIALRDSMTGVTAQVSRFPNPERSRSPPISYADVD 269
           SDG K  YKDL   TPERP  VTTFIA  DS TGVTA++SRFPNPER+RSPPISYAD+D
Sbjct: 51  SDGLKPFYKDLGTHTPERPSPVTTFIASHDSATGVTARISRFPNPERTRSPPISYADLD 109



 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 41/52 (78%), Positives = 45/52 (86%)
 Frame = -2

Query: 424 YKDLDAQTPERPPSVTTFIALRDSMTGVTAQVSRFPNPERSRSPPISYADVD 269
           Y DLD  TPERP  VTTFIA RDS TGVTA++SRFPNPER+RSPPISYADV+
Sbjct: 199 YADLDTDTPERPSPVTTFIASRDSATGVTARISRFPNPERTRSPPISYADVE 250



 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 40/52 (76%), Positives = 44/52 (84%)
 Frame = -2

Query: 424 YKDLDAQTPERPPSVTTFIALRDSMTGVTAQVSRFPNPERSRSPPISYADVD 269
           Y DLD  TPERP  VTTFI  RDS TGVTA++SRFPNPER+RSPPISYAD+D
Sbjct: 105 YADLDTNTPERPSPVTTFIPSRDSATGVTARISRFPNPERTRSPPISYADLD 156



 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 40/52 (76%), Positives = 44/52 (84%)
 Frame = -2

Query: 424 YKDLDAQTPERPPSVTTFIALRDSMTGVTAQVSRFPNPERSRSPPISYADVD 269
           Y DLD  TPERP  VTTFI  RDS TGVTA++SRFPNPER+RSPPISYAD+D
Sbjct: 152 YADLDTNTPERPSPVTTFIPSRDSATGVTARISRFPNPERTRSPPISYADLD 203


>ref|XP_002516820.1| 80 kD MCM3-associated protein, putative [Ricinus communis]
           gi|223543908|gb|EEF45434.1| 80 kD MCM3-associated
           protein, putative [Ricinus communis]
          Length = 1646

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 53/145 (36%), Positives = 74/145 (51%), Gaps = 1/145 (0%)
 Frame = -2

Query: 442 DGQKLLYKDLDAQTPERPPSVTTFIALRDSMTGVTAQVSRFPNPERSRSPPISYADVDGX 263
           +GQ+  +KD D QT +RP +VT+F+A R+S   VTA++SRF + +R+RSPP    D D  
Sbjct: 126 NGQRSFFKD-DDQTNQRPSAVTSFVASRNSGISVTAKISRFQDLKRTRSPPSHAWDEDLS 184

Query: 262 XXXXXXXXXXLSDDH-GHLLPLKSQPPPLVPVNHQSFRNFQGPSISVQQPALARSTLDSQ 86
                      SDD+  HL   +++  P+   N  S   FQ P      PAL++S  D+Q
Sbjct: 185 RNSSRTFLGIHSDDNSNHLDSARTRSSPVFFQNDNSIEQFQPPPGEGYLPALSQSAWDNQ 244

Query: 85  ASLPVNYPNFSVRPVQPSVSPYIGS 11
              P N P       Q S  P  GS
Sbjct: 245 HKFPNNNPKLLAPQDQSSALPNTGS 269


>emb|CBI26153.3| unnamed protein product [Vitis vinifera]
          Length = 1213

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 4/142 (2%)
 Frame = -2

Query: 424 YKDLDAQTPERPPSVTTFIALRDSMTGVTAQVSRFPNPERSRSPPI-SYADV---DGXXX 257
           + D DAQ  +RP +  +     +S T ++A+VSR  + +R+RSPP+ S  D    +    
Sbjct: 43  WSDYDAQVYQRPSAAPSLFPSHNSETSISARVSRSQDSKRARSPPVPSMGDEVSRNSKKF 102

Query: 256 XXXXXXXXLSDDHGHLLPLKSQPPPLVPVNHQSFRNFQGPSISVQQPALARSTLDSQASL 77
                   LS++H  L+  +++ PPL    + S   F+ P    QQ +L+ S    +  +
Sbjct: 103 VLRSHADSLSENHNRLVLQRTRSPPLAHEKNHSLEGFRSPFAEAQQSSLSSSGWGHRPEV 162

Query: 76  PVNYPNFSVRPVQPSVSPYIGS 11
           P +Y N        SVSPY+GS
Sbjct: 163 PSSYANLPTHQSVGSVSPYVGS 184


Top