BLASTX nr result

ID: Glycyrrhiza24_contig00005837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005837
         (1185 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK39859.1| unknown [Medicago truncatula]                          320   6e-85
ref|XP_003609357.1| Thylakoid lumenal 16.5 kDa protein [Medicago...   319   8e-85
ref|XP_003527192.1| PREDICTED: thylakoid lumenal 16.5 kDa protei...   288   2e-75
ref|XP_003541473.1| PREDICTED: LOW QUALITY PROTEIN: thylakoid lu...   275   2e-71
ref|XP_003549751.1| PREDICTED: thylakoid lumenal 16.5 kDa protei...   273   8e-71

>gb|AFK39859.1| unknown [Medicago truncatula]
          Length = 223

 Score =  320 bits (819), Expect = 6e-85
 Identities = 175/232 (75%), Positives = 193/232 (83%), Gaps = 14/232 (6%)
 Frame = +1

Query: 94  MATNFLSTA--------------APTYVYHPIKCNVKRQSATLCKVVNQQQALPSPSVSV 231
           MA+NFLSTA               PTY Y+PIKCN+KRQ  T CKVVNQ      PS+SV
Sbjct: 1   MASNFLSTANPFHLASSSQSSLVTPTYAYNPIKCNLKRQ-LTPCKVVNQ------PSLSV 53

Query: 232 TKRGISISFLTSFVLSFAGSKGGCFDANAAILEADEDDELMEKVKRDRKKRIERQGVISS 411
           TKR ISI F+TS VLS +G   G FDANAAILEAD+D EL+EKVK+DRKKR+E+QGVISS
Sbjct: 54  TKRDISIGFMTSLVLSLSGK--GLFDANAAILEADDDAELLEKVKKDRKKRLEKQGVISS 111

Query: 412 STKEKGYLQDLVYKLSEVGQAIEKNDLTAAGSVFGKGTDTEWVQKANIALNKLSSSPEEK 591
           STKE GYLQDLVYKLSEVGQAIE+NDLT+AGSV GKG D +WVQKANIALNKLSSSPEEK
Sbjct: 112 STKETGYLQDLVYKLSEVGQAIEQNDLTSAGSVLGKGKDADWVQKANIALNKLSSSPEEK 171

Query: 592 SEVDTFNSSLASLISSVAQNDVESSKLAFVSSASAFEKWTSLTGLVGQLKGL 747
           SEVDTFNSSLASL+SSVAQNDVESSK+AFVSSASA EKWTSLTGLVG+LKG+
Sbjct: 172 SEVDTFNSSLASLVSSVAQNDVESSKIAFVSSASAIEKWTSLTGLVGKLKGI 223


>ref|XP_003609357.1| Thylakoid lumenal 16.5 kDa protein [Medicago truncatula]
           gi|355510412|gb|AES91554.1| Thylakoid lumenal 16.5 kDa
           protein [Medicago truncatula]
          Length = 223

 Score =  319 bits (818), Expect = 8e-85
 Identities = 175/232 (75%), Positives = 193/232 (83%), Gaps = 14/232 (6%)
 Frame = +1

Query: 94  MATNFLSTA--------------APTYVYHPIKCNVKRQSATLCKVVNQQQALPSPSVSV 231
           MA+NFLSTA               PTY Y+PIKCN+KRQ  T CKVVNQ      PS+SV
Sbjct: 1   MASNFLSTANPFHLASSSQSSLVTPTYAYNPIKCNLKRQ-LTPCKVVNQ------PSLSV 53

Query: 232 TKRGISISFLTSFVLSFAGSKGGCFDANAAILEADEDDELMEKVKRDRKKRIERQGVISS 411
           TKR ISI F+TS VLS +G   G FDANAAILEAD+D EL+EKVK+DRKKR+E+QGVISS
Sbjct: 54  TKRDISIGFMTSLVLSLSGK--GLFDANAAILEADDDVELLEKVKKDRKKRLEKQGVISS 111

Query: 412 STKEKGYLQDLVYKLSEVGQAIEKNDLTAAGSVFGKGTDTEWVQKANIALNKLSSSPEEK 591
           STKE GYLQDLVYKLSEVGQAIE+NDLT+AGSV GKG D +WVQKANIALNKLSSSPEEK
Sbjct: 112 STKETGYLQDLVYKLSEVGQAIEQNDLTSAGSVLGKGKDADWVQKANIALNKLSSSPEEK 171

Query: 592 SEVDTFNSSLASLISSVAQNDVESSKLAFVSSASAFEKWTSLTGLVGQLKGL 747
           SEVDTFNSSLASL+SSVAQNDVESSK+AFVSSASA EKWTSLTGLVG+LKG+
Sbjct: 172 SEVDTFNSSLASLVSSVAQNDVESSKIAFVSSASAIEKWTSLTGLVGKLKGI 223


>ref|XP_003527192.1| PREDICTED: thylakoid lumenal 16.5 kDa protein, chloroplastic-like
           isoform 1 [Glycine max]
          Length = 229

 Score =  288 bits (737), Expect = 2e-75
 Identities = 163/235 (69%), Positives = 186/235 (79%), Gaps = 17/235 (7%)
 Frame = +1

Query: 94  MATNFLSTA---------------APTYVYH-PI-KCNVKRQSATLCKVVNQQQALPSPS 222
           MATN LST+                PTYVY+ PI KC VKR+  TLCK  NQ     SP 
Sbjct: 1   MATNILSTSNPFLLTNSFSSSSFVTPTYVYYNPIMKCTVKRE-LTLCKAANQPAPPHSPI 59

Query: 223 VSVTKRGISISFLTSFVLSFAGSKGGCFDANAAILEADEDDELMEKVKRDRKKRIERQGV 402
           V VTKRG+SISF+TSFVLS A  K    +ANAAILEAD+D+EL+EKVKRDRKKR+E+QGV
Sbjct: 60  V-VTKRGLSISFITSFVLSLASKK----NANAAILEADDDEELLEKVKRDRKKRLEKQGV 114

Query: 403 ISSSTKEKGYLQDLVYKLSEVGQAIEKNDLTAAGSVFGKGTDTEWVQKANIALNKLSSSP 582
           ISSS +E GYLQDLVYKLS VGQA+EKNDL+AAGSV G   D +WVQ+ANIA NKLSSSP
Sbjct: 115 ISSSKQETGYLQDLVYKLSTVGQALEKNDLSAAGSVLGGNADADWVQRANIAFNKLSSSP 174

Query: 583 EEKSEVDTFNSSLASLISSVAQNDVESSKLAFVSSASAFEKWTSLTGLVGQLKGL 747
           EEK+EVD+FNSSLASLISSV++NDVESSK+AFVSSA+AFEKWTS+TGL  QLKGL
Sbjct: 175 EEKTEVDSFNSSLASLISSVSKNDVESSKIAFVSSATAFEKWTSMTGLAAQLKGL 229


>ref|XP_003541473.1| PREDICTED: LOW QUALITY PROTEIN: thylakoid lumenal 16.5 kDa protein,
           chloroplastic-like, partial [Glycine max]
          Length = 219

 Score =  275 bits (703), Expect = 2e-71
 Identities = 151/217 (69%), Positives = 177/217 (81%)
 Frame = +1

Query: 97  ATNFLSTAAPTYVYHPIKCNVKRQSATLCKVVNQQQALPSPSVSVTKRGISISFLTSFVL 276
           +++ LS A  TYVYH IK   +RQ  TLC+ VN+   L + +  +TKRG+SISFLT+F++
Sbjct: 12  SSSSLSLATQTYVYHTIKXQCERQ-LTLCQAVNR---LATHTPILTKRGLSISFLTAFLV 67

Query: 277 SFAGSKGGCFDANAAILEADEDDELMEKVKRDRKKRIERQGVISSSTKEKGYLQDLVYKL 456
           S AG      DANAAILEAD+D+E +EKVKRDRKKR+ERQGVI SSTKE GYLQDLVYKL
Sbjct: 68  SLAGE-----DANAAILEADDDEERLEKVKRDRKKRLERQGVIKSSTKETGYLQDLVYKL 122

Query: 457 SEVGQAIEKNDLTAAGSVFGKGTDTEWVQKANIALNKLSSSPEEKSEVDTFNSSLASLIS 636
           S+VG+AIE +DL+ A SVFG GTDT+WVQ ANI+LNKLS+S EEK+ VDTFNSSLASLIS
Sbjct: 123 SKVGKAIENSDLSTAASVFGSGTDTDWVQNANISLNKLSASAEEKTAVDTFNSSLASLIS 182

Query: 637 SVAQNDVESSKLAFVSSASAFEKWTSLTGLVGQLKGL 747
           SVA  DVESSKLAFVSS SAFEKW+SL GLV QLKGL
Sbjct: 183 SVAGKDVESSKLAFVSSVSAFEKWSSLMGLVVQLKGL 219


>ref|XP_003549751.1| PREDICTED: thylakoid lumenal 16.5 kDa protein, chloroplastic-like
           isoform 1 [Glycine max]
          Length = 198

 Score =  273 bits (697), Expect = 8e-71
 Identities = 147/201 (73%), Positives = 168/201 (83%)
 Frame = +1

Query: 142 PIKCNVKRQSATLCKVVNQQQALPSPSVSVTKRGISISFLTSFVLSFAGSKGGCFDANAA 321
           PI C+VKRQ  TLCK V+Q      P + +TKRG+SISF T+F LS AG      DANAA
Sbjct: 5   PIMCSVKRQ-LTLCKAVSQPAI--HPPIILTKRGLSISFPTTFSLSLAGE-----DANAA 56

Query: 322 ILEADEDDELMEKVKRDRKKRIERQGVISSSTKEKGYLQDLVYKLSEVGQAIEKNDLTAA 501
           IL+AD+D+EL+EKVKRDRKKR+ERQG+I SS+KE GYLQDLVYKLSEVG+AIE NDL  A
Sbjct: 57  ILDADDDEELLEKVKRDRKKRLERQGMIKSSSKETGYLQDLVYKLSEVGKAIENNDLATA 116

Query: 502 GSVFGKGTDTEWVQKANIALNKLSSSPEEKSEVDTFNSSLASLISSVAQNDVESSKLAFV 681
            SVFG GTDT+WVQ AN+AL+KLS+SPEEK+ VDTFNSSLASLISSVA NDVESSKLAFV
Sbjct: 117 ASVFGSGTDTDWVQNANVALDKLSASPEEKTVVDTFNSSLASLISSVAANDVESSKLAFV 176

Query: 682 SSASAFEKWTSLTGLVGQLKG 744
           SSASAFE+W+SLTGL  QLKG
Sbjct: 177 SSASAFEEWSSLTGLAVQLKG 197


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