BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005789
         (1388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF45348.1| nucleoporin [Lotus japonicus]                         642   0.0  
ref|XP_003550123.1| PREDICTED: nuclear pore complex protein Nup8...   637   e-180
ref|XP_003588386.1| Nuclear pore complex protein Nup85 [Medicago...   565   e-158
ref|XP_002283798.1| PREDICTED: nuclear pore complex protein Nup8...   556   e-156
ref|XP_002516506.1| conserved hypothetical protein [Ricinus comm...   532   e-149

>dbj|BAF45348.1| nucleoporin [Lotus japonicus]
          Length = 711

 Score =  642 bits (1655), Expect = 0.0
 Identities = 319/361 (88%), Positives = 334/361 (92%)
 Frame = -1

Query: 1388 TATCYWIELYVSHFLYIRPFTTGIESMHNLAQKCIQLKPPSATHRLTGLMIGILGENTEV 1209
            TATC+WIELYVSHFLYIRPFTTGIESM+NLAQKC+QLKPPS+ H+LTGLMIGILGENTEV
Sbjct: 350  TATCHWIELYVSHFLYIRPFTTGIESMYNLAQKCMQLKPPSSIHKLTGLMIGILGENTEV 409

Query: 1208 VLAECSREFGPWMVAHALELLTVGSEQAEILLHDERYNLGGISIVELHRLAYAQVLSSHA 1029
            VLAECSREFGPWMVAHA+ELLT GSEQAE+LLHDE YNLGGISIVELHRLAYAQVLSSHA
Sbjct: 410  VLAECSREFGPWMVAHAVELLTAGSEQAEVLLHDEHYNLGGISIVELHRLAYAQVLSSHA 469

Query: 1028 LTWQIAPIYLTSCMKQGMGLLENLLCRQSVQRNDMLLKNIEICRLYELDHISSNIMKVAG 849
            LTWQIAPIYLTSCMKQGMGLLENLL RQSVQ ND LLKNIEICRLYELDHISS IMKVAG
Sbjct: 470  LTWQIAPIYLTSCMKQGMGLLENLLYRQSVQHNDTLLKNIEICRLYELDHISSKIMKVAG 529

Query: 848  VYNWKHGRKGAGVFWLQQAQDASCLDRIAQQLFDSVGKSISDESFKQWEGLIELLGSESK 669
            V++WKHGRKGAGVFWLQQAQDASCL RIA QLFD+VGKSISDESFKQWEG+IELLGSESK
Sbjct: 530  VFHWKHGRKGAGVFWLQQAQDASCLGRIALQLFDAVGKSISDESFKQWEGIIELLGSESK 589

Query: 668  PAGGLEFLHKYRDFKKSLQLVYGGKSTDAARQAVGSLILLMKNPSTPQRFWLPLLYDSLK 489
            PAGGLEFLHKYRDFKKSLQ V GGKST+AARQAVGSLILLMKNPSTP RFWLPLLYDSLK
Sbjct: 590  PAGGLEFLHKYRDFKKSLQQVSGGKSTEAARQAVGSLILLMKNPSTPPRFWLPLLYDSLK 649

Query: 488  LLNWKDCPLLSVSETNXXXXXXXXXXLAKQRPHFTESSLPPEALGSIRLALATNLGRAIL 309
            LLNWKDC LL+ SETN          LA+ RPHFTE SLPPEAL S+RLALATNLGRAIL
Sbjct: 650  LLNWKDCSLLTESETNLLLNKLQELSLARLRPHFTEPSLPPEALSSVRLALATNLGRAIL 709

Query: 308  D 306
            D
Sbjct: 710  D 710


>ref|XP_003550123.1| PREDICTED: nuclear pore complex protein Nup85-like [Glycine max]
          Length = 698

 Score =  637 bits (1643), Expect = e-180
 Identities = 316/360 (87%), Positives = 333/360 (92%)
 Frame = -1

Query: 1385 ATCYWIELYVSHFLYIRPFTTGIESMHNLAQKCIQLKPPSATHRLTGLMIGILGENTEVV 1206
            ATCYWIELY+SHFLYIRPFT GIESM+NLAQKCIQLKP S+THRL+ LMIGIL ENTEVV
Sbjct: 338  ATCYWIELYISHFLYIRPFTMGIESMYNLAQKCIQLKPRSSTHRLSVLMIGILEENTEVV 397

Query: 1205 LAECSREFGPWMVAHALELLTVGSEQAEILLHDERYNLGGISIVELHRLAYAQVLSSHAL 1026
            LAECSREFGPW+VAHA+ELLT GSEQAEILLH+ERYNLGGISIVELHRL YAQ+LSSHAL
Sbjct: 398  LAECSREFGPWLVAHAIELLTAGSEQAEILLHEERYNLGGISIVELHRLVYAQILSSHAL 457

Query: 1025 TWQIAPIYLTSCMKQGMGLLENLLCRQSVQRNDMLLKNIEICRLYELDHISSNIMKVAGV 846
            TWQIAPIYLTSCMKQGMGLLENLL RQS Q ND+LLKNIEICRLYELDHISSNIMK+AGV
Sbjct: 458  TWQIAPIYLTSCMKQGMGLLENLLYRQSAQHNDVLLKNIEICRLYELDHISSNIMKIAGV 517

Query: 845  YNWKHGRKGAGVFWLQQAQDASCLDRIAQQLFDSVGKSISDESFKQWEGLIELLGSESKP 666
            ++WKHG KGAGVFWLQQAQDASCLD+IAQQLFDSVGKSISDESFKQWEG+IELLGSESKP
Sbjct: 518  HHWKHGHKGAGVFWLQQAQDASCLDKIAQQLFDSVGKSISDESFKQWEGMIELLGSESKP 577

Query: 665  AGGLEFLHKYRDFKKSLQLVYGGKSTDAARQAVGSLILLMKNPSTPQRFWLPLLYDSLKL 486
            AGGLEFLHKYRDFKKSLQ V  GKSTDAARQAVGSLILLMKNPSTPQRFWLPLLYDSLKL
Sbjct: 578  AGGLEFLHKYRDFKKSLQKVSSGKSTDAARQAVGSLILLMKNPSTPQRFWLPLLYDSLKL 637

Query: 485  LNWKDCPLLSVSETNXXXXXXXXXXLAKQRPHFTESSLPPEALGSIRLALATNLGRAILD 306
            LNW+DCPLLSVSETN          LAK RPH TE SLPP+AL SIRLALATNLG+AILD
Sbjct: 638  LNWQDCPLLSVSETNLLLNKLHELSLAKLRPHHTEPSLPPDALSSIRLALATNLGQAILD 697


>ref|XP_003588386.1| Nuclear pore complex protein Nup85 [Medicago truncatula]
            gi|355477434|gb|AES58637.1| Nuclear pore complex protein
            Nup85 [Medicago truncatula]
          Length = 919

 Score =  565 bits (1455), Expect = e-158
 Identities = 275/305 (90%), Positives = 292/305 (95%)
 Frame = -1

Query: 1388 TATCYWIELYVSHFLYIRPFTTGIESMHNLAQKCIQLKPPSATHRLTGLMIGILGENTEV 1209
            TA+CYW+ELY+SHFLYIRPF  G+ESM+NLAQKCIQLKPP+ THRLTGL+IGILGENTEV
Sbjct: 386  TASCYWVELYISHFLYIRPFMIGVESMYNLAQKCIQLKPPTGTHRLTGLLIGILGENTEV 445

Query: 1208 VLAECSREFGPWMVAHALELLTVGSEQAEILLHDERYNLGGISIVELHRLAYAQVLSSHA 1029
            VLAE SREFGPWMVAHA+ELLT GSEQAEILL+DERYNLGGIS+VELHRLAYAQVLSSHA
Sbjct: 446  VLAEISREFGPWMVAHAVELLTAGSEQAEILLYDERYNLGGISMVELHRLAYAQVLSSHA 505

Query: 1028 LTWQIAPIYLTSCMKQGMGLLENLLCRQSVQRNDMLLKNIEICRLYELDHISSNIMKVAG 849
            LTWQIAPIYLTSCMKQGMGLLENLL RQSVQ N+MLLKNIEICRLYELDHISSNIMKVAG
Sbjct: 506  LTWQIAPIYLTSCMKQGMGLLENLLYRQSVQHNNMLLKNIEICRLYELDHISSNIMKVAG 565

Query: 848  VYNWKHGRKGAGVFWLQQAQDASCLDRIAQQLFDSVGKSISDESFKQWEGLIELLGSESK 669
            VY+WKHGRKGAGVFWLQQ+QD +CLDRIAQQLFDSVGKSISDESFKQWEGLIELLGSESK
Sbjct: 566  VYHWKHGRKGAGVFWLQQSQDTNCLDRIAQQLFDSVGKSISDESFKQWEGLIELLGSESK 625

Query: 668  PAGGLEFLHKYRDFKKSLQLVYGGKSTDAARQAVGSLILLMKNPSTPQRFWLPLLYDSLK 489
            PAGGLEFLHKYRDFKKSLQ+VY GKSTDAARQAVGSLILLMKNPSTPQRFWLPLL+DS  
Sbjct: 626  PAGGLEFLHKYRDFKKSLQMVYSGKSTDAARQAVGSLILLMKNPSTPQRFWLPLLFDSSY 685

Query: 488  LLNWK 474
             +N K
Sbjct: 686  HINGK 690



 Score = 90.9 bits (224), Expect = 7e-16
 Identities = 47/63 (74%), Positives = 50/63 (79%)
 Frame = -1

Query: 494  LKLLNWKDCPLLSVSETNXXXXXXXXXXLAKQRPHFTESSLPPEALGSIRLALATNLGRA 315
            LKLLNWKD PLLSVSETN          LA+QRPHFTE +LPP+AL SIRLALATNLGRA
Sbjct: 856  LKLLNWKDSPLLSVSETNLLLNKLQEFSLARQRPHFTEPNLPPQALSSIRLALATNLGRA 915

Query: 314  ILD 306
            ILD
Sbjct: 916  ILD 918


>ref|XP_002283798.1| PREDICTED: nuclear pore complex protein Nup85 [Vitis vinifera]
            gi|296081842|emb|CBI20847.3| unnamed protein product
            [Vitis vinifera]
          Length = 715

 Score =  556 bits (1433), Expect = e-156
 Identities = 275/361 (76%), Positives = 316/361 (87%)
 Frame = -1

Query: 1388 TATCYWIELYVSHFLYIRPFTTGIESMHNLAQKCIQLKPPSATHRLTGLMIGILGENTEV 1209
            T+TC+WIELY+SHFLY+RPFT G+ESMH LAQKCIQLKP S++HRL GL++GILGENTEV
Sbjct: 354  TSTCHWIELYISHFLYVRPFTVGLESMHALAQKCIQLKPISSSHRLMGLIVGILGENTEV 413

Query: 1208 VLAECSREFGPWMVAHALELLTVGSEQAEILLHDERYNLGGISIVELHRLAYAQVLSSHA 1029
            VLAECSR FGPWMVAHA+ELLT GS+QAEI+L + R NLGGISI ELHRL YAQVLSSHA
Sbjct: 414  VLAECSRAFGPWMVAHAIELLTAGSDQAEIILQEGRDNLGGISIEELHRLIYAQVLSSHA 473

Query: 1028 LTWQIAPIYLTSCMKQGMGLLENLLCRQSVQRNDMLLKNIEICRLYELDHISSNIMKVAG 849
            LTWQIAPIYLTSCMKQGMGLLE LL +Q VQ N MLLK  EICRLY+L+ ISS+IMK+AG
Sbjct: 474  LTWQIAPIYLTSCMKQGMGLLEVLLYKQPVQDNQMLLKTTEICRLYDLESISSSIMKIAG 533

Query: 848  VYNWKHGRKGAGVFWLQQAQDASCLDRIAQQLFDSVGKSISDESFKQWEGLIELLGSESK 669
            VY+WKHGRKG+GVFWLQQA+D   L+RIAQQLFD VG+SISDESFKQWEGLIELLGSESK
Sbjct: 534  VYHWKHGRKGSGVFWLQQARDEFRLNRIAQQLFDFVGRSISDESFKQWEGLIELLGSESK 593

Query: 668  PAGGLEFLHKYRDFKKSLQLVYGGKSTDAARQAVGSLILLMKNPSTPQRFWLPLLYDSLK 489
             AGGL+FLHKYRDFKKSLQ V  GK+TDAA+QAV SLI LM+NPSTPQRFWLPLL+DSLK
Sbjct: 594  IAGGLDFLHKYRDFKKSLQQVQVGKTTDAAQQAVESLISLMRNPSTPQRFWLPLLHDSLK 653

Query: 488  LLNWKDCPLLSVSETNXXXXXXXXXXLAKQRPHFTESSLPPEALGSIRLALATNLGRAIL 309
            LL+W++ PLL+ ++TN          +A+ RP F E++LPP+AL S+RLALATNLGRAIL
Sbjct: 654  LLSWQERPLLNANQTNLLLNKLQELSMARLRPDFIEANLPPQALSSVRLALATNLGRAIL 713

Query: 308  D 306
            +
Sbjct: 714  E 714


>ref|XP_002516506.1| conserved hypothetical protein [Ricinus communis]
            gi|223544326|gb|EEF45847.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 725

 Score =  532 bits (1371), Expect = e-149
 Identities = 260/361 (72%), Positives = 307/361 (85%)
 Frame = -1

Query: 1388 TATCYWIELYVSHFLYIRPFTTGIESMHNLAQKCIQLKPPSATHRLTGLMIGILGENTEV 1209
            T TC W+E+Y+SH LYIRPFT G+ESM++LAQKCIQLKP S+ H+L  L++GILGENTEV
Sbjct: 363  TMTCNWVEMYISHILYIRPFTVGLESMYSLAQKCIQLKPTSSPHKLMQLILGILGENTEV 422

Query: 1208 VLAECSREFGPWMVAHALELLTVGSEQAEILLHDERYNLGGISIVELHRLAYAQVLSSHA 1029
            +LAECSR FGPWMV HA+ELLT GS QAE+LL++ER NLGGISI ELH+L YAQVLSSH 
Sbjct: 423  ILAECSRGFGPWMVTHAIELLTAGSVQAEMLLNEERDNLGGISIGELHQLVYAQVLSSHI 482

Query: 1028 LTWQIAPIYLTSCMKQGMGLLENLLCRQSVQRNDMLLKNIEICRLYELDHISSNIMKVAG 849
            LTWQIAPIYL SC+KQGMGLLE+LL RQ VQ N++L+KN+EICRL ELD +S +IMK+AG
Sbjct: 483  LTWQIAPIYLISCIKQGMGLLESLLYRQPVQYNELLIKNLEICRLNELDSVSRDIMKIAG 542

Query: 848  VYNWKHGRKGAGVFWLQQAQDASCLDRIAQQLFDSVGKSISDESFKQWEGLIELLGSESK 669
            VY+WKHG+KG+GV+WL+QA+D   L+RIAQQLFDSVGKSISDESFKQWEGLI LLGSESK
Sbjct: 543  VYHWKHGKKGSGVYWLRQARDEVSLNRIAQQLFDSVGKSISDESFKQWEGLIGLLGSESK 602

Query: 668  PAGGLEFLHKYRDFKKSLQLVYGGKSTDAARQAVGSLILLMKNPSTPQRFWLPLLYDSLK 489
            PAGGLEFLHKYRDFKKSL+ VY GK+TDAAR A  SL+ LMK+PSTPQRFWLPLL DSLK
Sbjct: 603  PAGGLEFLHKYRDFKKSLKQVYDGKTTDAARVAAESLLSLMKSPSTPQRFWLPLLNDSLK 662

Query: 488  LLNWKDCPLLSVSETNXXXXXXXXXXLAKQRPHFTESSLPPEALGSIRLALATNLGRAIL 309
            LL+W++ PLL+VS+TN          +A+  P   E+  PP+ L S+RLALATNLGRAIL
Sbjct: 663  LLSWEERPLLNVSQTNLLLNKLQELSMARLHPDSVEADFPPQTLNSVRLALATNLGRAIL 722

Query: 308  D 306
            +
Sbjct: 723  E 723