BLASTX nr result

ID: Glycyrrhiza24_contig00005764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005764
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519219.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   351   6e-95
ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago t...   319   2e-85
ref|XP_004160739.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   238   6e-61
ref|XP_004138388.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   238   6e-61
ref|XP_002520888.1| snf2 histone linker phd ring helicase, putat...   228   1e-57

>ref|XP_003519219.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Glycine max]
          Length = 1600

 Score =  351 bits (901), Expect = 6e-95
 Identities = 176/217 (81%), Positives = 182/217 (83%)
 Frame = +3

Query: 3    LFSSKLSAAQLEFQNSYMQVCNAYRDSRTDQDTFWWLEALHHAEQNKDFSTELIRKIEEX 182
            +FSSKLS +Q EFQNSY QVCNAY DSRTDQDTFWWLEALHHAEQNKDFSTELIRKIEE 
Sbjct: 915  VFSSKLSTSQQEFQNSYTQVCNAYHDSRTDQDTFWWLEALHHAEQNKDFSTELIRKIEEA 974

Query: 183  XXXXXXXXXXXXXXXRFRSISSLKYQIQTGLDQLEASRKVLLDRLLEIDHTMEKPKDEDI 362
                           RFRSISSLKYQIQT LDQLEASRK+LLDRLLEID TMEKPK+EDI
Sbjct: 975  ISGTSNNSKSSRVTARFRSISSLKYQIQTALDQLEASRKMLLDRLLEIDQTMEKPKEEDI 1034

Query: 363  ERVGKCRNCQPNCDGPPCVLCELDELFQDYEARLFVLKNERGGIISSAEEAVDFQKKSFA 542
            ERVGKCRNCQPNCDGPPC+LCELDELFQDYEARLFVLKNERGGIISSAEEAVDFQKK+FA
Sbjct: 1035 ERVGKCRNCQPNCDGPPCILCELDELFQDYEARLFVLKNERGGIISSAEEAVDFQKKNFA 1094

Query: 543  LNHFLXXXXXXXXXXXXXDIGHEESKKRNVGQRVVVS 653
            LNHFL             DIGHEESKKRNVGQRVVVS
Sbjct: 1095 LNHFLSKLSQSNHSSTVSDIGHEESKKRNVGQRVVVS 1131


>ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago truncatula]
            gi|355516770|gb|AES98393.1| ATP-dependent helicase,
            putative [Medicago truncatula]
          Length = 1764

 Score =  319 bits (818), Expect = 2e-85
 Identities = 162/217 (74%), Positives = 174/217 (80%)
 Frame = +3

Query: 3    LFSSKLSAAQLEFQNSYMQVCNAYRDSRTDQDTFWWLEALHHAEQNKDFSTELIRKIEEX 182
            +FSSKL AAQ EFQ+SYMQVCNAY D+ T+Q+T WWLEALHHAE++KDFSTELIRKIEE 
Sbjct: 1040 VFSSKLVAAQQEFQSSYMQVCNAYHDTSTNQNTLWWLEALHHAEKDKDFSTELIRKIEES 1099

Query: 183  XXXXXXXXXXXXXXXRFRSISSLKYQIQTGLDQLEASRKVLLDRLLEIDHTMEKPKDEDI 362
                           RFRSISSL Y+IQTGLDQL ASRKV+LDRLLEID TME PKDEDI
Sbjct: 1100 ISGNSNNSKSSRLAARFRSISSLTYEIQTGLDQLVASRKVVLDRLLEIDQTMENPKDEDI 1159

Query: 363  ERVGKCRNCQPNCDGPPCVLCELDELFQDYEARLFVLKNERGGIISSAEEAVDFQKKSFA 542
            ERVGKCRNCQPNCDGPPCVLCELDELFQ YEARLFVLKNERG IISSAEEAVDFQKKSFA
Sbjct: 1160 ERVGKCRNCQPNCDGPPCVLCELDELFQHYEARLFVLKNERGDIISSAEEAVDFQKKSFA 1219

Query: 543  LNHFLXXXXXXXXXXXXXDIGHEESKKRNVGQRVVVS 653
             NHFL             DI +EES+KRNVGQ+VV S
Sbjct: 1220 RNHFLSNLSQSNQSSSVSDIDNEESRKRNVGQKVVTS 1256


>ref|XP_004160739.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            SHPRH-like [Cucumis sativus]
          Length = 1520

 Score =  238 bits (608), Expect = 6e-61
 Identities = 127/217 (58%), Positives = 150/217 (69%)
 Frame = +3

Query: 3    LFSSKLSAAQLEFQNSYMQVCNAYRDSRTDQDTFWWLEALHHAEQNKDFSTELIRKIEEX 182
            +FSSKLS AQ EF  SYMQV +  +D     D  WWLEA+HHAEQNKDFS ELIRKIEE 
Sbjct: 998  VFSSKLSIAQQEFTKSYMQVGSELKDRENFNDV-WWLEAVHHAEQNKDFSHELIRKIEEA 1056

Query: 183  XXXXXXXXXXXXXXXRFRSISSLKYQIQTGLDQLEASRKVLLDRLLEIDHTMEKPKDEDI 362
                           RFRSIS+LKY +Q+GLD LEASRKV+LDRLLEID TM+ PK+EDI
Sbjct: 1057 VSGNLNNSKSRVGS-RFRSISALKYHVQSGLDLLEASRKVVLDRLLEIDQTMKSPKEEDI 1115

Query: 363  ERVGKCRNCQPNCDGPPCVLCELDELFQDYEARLFVLKNERGGIISSAEEAVDFQKKSFA 542
            ERV  CR CQ + +GPPCVLCELDELFQ+YEARLF L   +GG+++S EEAV+ QKK  A
Sbjct: 1116 ERVRYCRICQADSNGPPCVLCELDELFQEYEARLFRLNKVQGGMVTSVEEAVEAQKKKSA 1175

Query: 543  LNHFLXXXXXXXXXXXXXDIGHEESKKRNVGQRVVVS 653
            LN F               +GHEE  KR+ G++V+VS
Sbjct: 1176 LNRFYWSLLQQNKNSSSSKVGHEEPNKRDAGEKVMVS 1212


>ref|XP_004138388.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Cucumis sativus]
          Length = 1520

 Score =  238 bits (608), Expect = 6e-61
 Identities = 127/217 (58%), Positives = 150/217 (69%)
 Frame = +3

Query: 3    LFSSKLSAAQLEFQNSYMQVCNAYRDSRTDQDTFWWLEALHHAEQNKDFSTELIRKIEEX 182
            +FSSKLS AQ EF  SYMQV +  +D     D  WWLEA+HHAEQNKDFS ELIRKIEE 
Sbjct: 998  VFSSKLSIAQQEFTKSYMQVGSELKDRENFNDV-WWLEAVHHAEQNKDFSHELIRKIEEA 1056

Query: 183  XXXXXXXXXXXXXXXRFRSISSLKYQIQTGLDQLEASRKVLLDRLLEIDHTMEKPKDEDI 362
                           RFRSIS+LKY +Q+GLD LEASRKV+LDRLLEID TM+ PK+EDI
Sbjct: 1057 VSGNLNNSKSRVGS-RFRSISALKYHVQSGLDLLEASRKVVLDRLLEIDQTMKSPKEEDI 1115

Query: 363  ERVGKCRNCQPNCDGPPCVLCELDELFQDYEARLFVLKNERGGIISSAEEAVDFQKKSFA 542
            ERV  CR CQ + +GPPCVLCELDELFQ+YEARLF L   +GG+++S EEAV+ QKK  A
Sbjct: 1116 ERVRYCRICQADSNGPPCVLCELDELFQEYEARLFRLNKVQGGMVTSVEEAVEAQKKKSA 1175

Query: 543  LNHFLXXXXXXXXXXXXXDIGHEESKKRNVGQRVVVS 653
            LN F               +GHEE  KR+ G++V+VS
Sbjct: 1176 LNRFYWSLLQQNKNSSSSKVGHEEPNKRDAGEKVMVS 1212


>ref|XP_002520888.1| snf2 histone linker phd ring helicase, putative [Ricinus communis]
            gi|223540019|gb|EEF41597.1| snf2 histone linker phd ring
            helicase, putative [Ricinus communis]
          Length = 1588

 Score =  228 bits (580), Expect = 1e-57
 Identities = 124/217 (57%), Positives = 147/217 (67%)
 Frame = +3

Query: 3    LFSSKLSAAQLEFQNSYMQVCNAYRDSRTDQDTFWWLEALHHAEQNKDFSTELIRKIEEX 182
            +F++KLS AQ +F+ SYMQVCNA  D   +Q + WWL AL+HAE NKDF  +LI+KIEE 
Sbjct: 912  MFTAKLSMAQKDFRKSYMQVCNAISDGE-NQHSAWWLNALYHAELNKDFKRDLIKKIEEA 970

Query: 183  XXXXXXXXXXXXXXXRFRSISSLKYQIQTGLDQLEASRKVLLDRLLEIDHTMEKPKDEDI 362
                           +FRSI++LKY IQT LDQLEASRK LLDRLLEID TM +PK+ DI
Sbjct: 971  VSGTLNNSRSSRIASQFRSIAALKYHIQTRLDQLEASRKTLLDRLLEIDLTMGQPKEADI 1030

Query: 363  ERVGKCRNCQPNCDGPPCVLCELDELFQDYEARLFVLKNERGGIISSAEEAVDFQKKSFA 542
            ERV  CR CQ   DGP C+ CELDELFQDYEARLF L   RG II+SAEEAVD QKK+ A
Sbjct: 1031 ERVRFCRICQAVDDGPICLHCELDELFQDYEARLFRLNKLRGDIITSAEEAVDLQKKNSA 1090

Query: 543  LNHFLXXXXXXXXXXXXXDIGHEESKKRNVGQRVVVS 653
            LN F              D  ++ SK+R+ G+RVVVS
Sbjct: 1091 LNRFYWNLSGTNRSSTSSDDANDASKRRDAGERVVVS 1127


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