BLASTX nr result

ID: Glycyrrhiza24_contig00005754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005754
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526921.1| PREDICTED: U5 small nuclear ribonucleoprotei...   129   2e-28
ref|XP_003522451.1| PREDICTED: uncharacterized protein LOC100798...   121   5e-26
ref|XP_003602749.1| WD repeat-containing protein, putative [Medi...   108   4e-22
ref|XP_004145140.1| PREDICTED: uncharacterized protein LOC101220...    81   8e-14
ref|XP_002280902.1| PREDICTED: uncharacterized WD repeat-contain...    81   1e-13

>ref|XP_003526921.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
           [Glycine max]
          Length = 533

 Score =  129 bits (325), Expect = 2e-28
 Identities = 73/107 (68%), Positives = 89/107 (83%)
 Frame = +1

Query: 4   EVNNLRHRLSYYQSQLEEAEKRLQDSESKLARLRGQTKLTNAVSSRSSLALEDGVRAVKT 183
           EV NLRHR++YY++QL+EAEKRLQDSESKLARLRGQT     VSSRS+  L+DG++ +KT
Sbjct: 30  EVKNLRHRIAYYKTQLDEAEKRLQDSESKLARLRGQT-----VSSRST--LDDGIKTLKT 82

Query: 184 ERRSNSPVGFDRNEGSSKNNTQSNKPELVIPALTPKVVSPPVLLPRS 324
           ERRSNSP+  DRNEGS+KN  QS KPEL+IP+  PK +S PVLLP+S
Sbjct: 83  ERRSNSPI--DRNEGSTKNRHQS-KPELLIPSANPK-ISQPVLLPKS 125


>ref|XP_003522451.1| PREDICTED: uncharacterized protein LOC100798141 [Glycine max]
          Length = 1494

 Score =  121 bits (304), Expect = 5e-26
 Identities = 70/109 (64%), Positives = 89/109 (81%)
 Frame = +1

Query: 4   EVNNLRHRLSYYQSQLEEAEKRLQDSESKLARLRGQTKLTNAVSSRSSLALEDGVRAVKT 183
           EV NLRHR++YY++QL+EAEKRLQDSESKLARLRGQT     VSSRS+  L+DG+  +KT
Sbjct: 30  EVKNLRHRIAYYKTQLDEAEKRLQDSESKLARLRGQT-----VSSRST--LDDGIETLKT 82

Query: 184 ERRSNSPVGFDRNEGSSKNNTQSNKPELVIPALTPKVVSPPVLLPRSSA 330
           + RS+SP+  DRNE S+K+  QS KPEL+IP+L PK +S PVLLP+SS+
Sbjct: 83  KSRSSSPI--DRNEVSTKSQHQS-KPELLIPSLNPK-ISQPVLLPKSSS 127


>ref|XP_003602749.1| WD repeat-containing protein, putative [Medicago truncatula]
           gi|355491797|gb|AES73000.1| WD repeat-containing
           protein, putative [Medicago truncatula]
          Length = 517

 Score =  108 bits (271), Expect = 4e-22
 Identities = 64/100 (64%), Positives = 78/100 (78%), Gaps = 2/100 (2%)
 Frame = +1

Query: 1   REVNNLRHRLSYYQSQLEEAEKRLQDSESKLARLRGQT--KLTNAVSSRSSLALEDGVRA 174
           REVNNLRHRL+Y ++QL++AEKRL+DSESKLARLRGQT  K+TN+         ++G  A
Sbjct: 27  REVNNLRHRLAYTKNQLDDAEKRLKDSESKLARLRGQTTKKITNSDD-------DNGTVA 79

Query: 175 VKTERRSNSPVGFDRNEGSSKNNTQSNKPELVIPALTPKV 294
           VK ERRSNSP+  DRNE S K+N QS K ELVIPA+TPK+
Sbjct: 80  VKKERRSNSPI--DRNERSYKSNKQS-KTELVIPAVTPKI 116


>ref|XP_004145140.1| PREDICTED: uncharacterized protein LOC101220523 [Cucumis sativus]
           gi|449473874|ref|XP_004154008.1| PREDICTED:
           uncharacterized protein LOC101207060 [Cucumis sativus]
           gi|449523433|ref|XP_004168728.1| PREDICTED:
           uncharacterized LOC101207060 [Cucumis sativus]
          Length = 524

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 53/96 (55%), Positives = 63/96 (65%)
 Frame = +1

Query: 4   EVNNLRHRLSYYQSQLEEAEKRLQDSESKLARLRGQTKLTNAVSSRSSLALEDGVRAVKT 183
           EV NL+HR+SYY SQLEEA+KRLQD+ESKLARLR Q   +NAVSS+ S  L     +VK 
Sbjct: 31  EVQNLKHRVSYYTSQLEEAQKRLQDTESKLARLRRQ---SNAVSSKDS--LRSRAVSVKV 85

Query: 184 ERRSNSPVGFDRNEGSSKNNTQSNKPELVIPALTPK 291
           E+          NEGS       +KPELVIPA+ PK
Sbjct: 86  EQTV--------NEGSRPQPV--SKPELVIPAVVPK 111


>ref|XP_002280902.1| PREDICTED: uncharacterized WD repeat-containing protein alr3466
           [Vitis vinifera] gi|297734510|emb|CBI15757.3| unnamed
           protein product [Vitis vinifera]
          Length = 526

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 46/101 (45%), Positives = 66/101 (65%)
 Frame = +1

Query: 1   REVNNLRHRLSYYQSQLEEAEKRLQDSESKLARLRGQTKLTNAVSSRSSLALEDGVRAVK 180
           +EV ++R R++YYQSQL+EAEK+L DS+++L RLR +    N VSSRS   L++G + VK
Sbjct: 41  KEVEHIRKRITYYQSQLQEAEKKLLDSQAQLGRLRSK---DNLVSSRS--PLDNGTKKVK 95

Query: 181 TERRSNSPVGFDRNEGSSKNNTQSNKPELVIPALTPKVVSP 303
            ERRS SP+               ++PEL+IPA+ PK+  P
Sbjct: 96  VERRSTSPLQL------------QSRPELLIPAVNPKISQP 124


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