BLASTX nr result

ID: Glycyrrhiza24_contig00005744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005744
         (1757 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240122.1| uncharacterized protein LOC100811099 [Glycin...   436   e-120
gb|AFK37436.1| unknown [Lotus japonicus]                              425   e-116
ref|XP_003521218.1| PREDICTED: uncharacterized protein LOC100782...   420   e-115
ref|XP_003625277.1| RING finger protein [Medicago truncatula] gi...   417   e-114
ref|XP_002530725.1| rnf5, putative [Ricinus communis] gi|2235297...   355   3e-95

>ref|NP_001240122.1| uncharacterized protein LOC100811099 [Glycine max]
            gi|255645563|gb|ACU23276.1| unknown [Glycine max]
          Length = 442

 Score =  436 bits (1121), Expect = e-120
 Identities = 241/353 (68%), Positives = 269/353 (76%), Gaps = 4/353 (1%)
 Frame = +1

Query: 334  EAARVHHRIQPETWQRHLNISLELDHFLANSGNGGVLQAGEGSVAAEERETESEVPKACE 513
            EA R H +I PE      NIS+EL+HFL NSGNG  LQAGEGSVAAEER    EVPKAC+
Sbjct: 74   EATR-HFQIPPEA----RNISVELNHFLVNSGNGSALQAGEGSVAAEERM--EEVPKACD 126

Query: 514  ISNGGVTLDETSEKEEDVEKGTGGSDVGFFDCNICLDLAKDPVVTCCGHLFCWPCLYRWL 693
              NG V  DETS+K+EDVEKG+G +D  FFDCNICLDLA+DPVVTCCGHLFCWPCLYRWL
Sbjct: 127  NVNG-VAEDETSQKKEDVEKGSG-NDGDFFDCNICLDLARDPVVTCCGHLFCWPCLYRWL 184

Query: 694  YLQSDTKECPVCKGEVTVKSVTPIHGRGNNVPVHEEDSTLKIPLRPSARHVSEDSDVRQT 873
            +L SD KECPVCKGEVT+KSVTP++GRGNNV   EEDS LKIP RP A+ V     +RQT
Sbjct: 185  HLHSDAKECPVCKGEVTLKSVTPVYGRGNNVRGPEEDSALKIPPRPQAKRV---ESLRQT 241

Query: 874  TQRSAFAMPVEEMIRRLGSRLDLNQDLVQVQPHEHDNVRQAAERTSSLLSRFLAGRGVRR 1053
             QR+AFA+PVEEMIRRLGSR+DL +DL  VQP E D  R+ AERT+SLLSRFL  RG+RR
Sbjct: 242  IQRNAFALPVEEMIRRLGSRIDLTRDL--VQPPEPDAARETAERTTSLLSRFLTARGMRR 299

Query: 1054 EHNNLGGEPQDDAMSTLAQNNV---VGGGPLAAGNRRVQSLLLRRAQAHR-DRGTFSSTL 1221
            EH NL   P+D  +  LAQNNV     G P      RVQS LLRR Q+HR    T SS L
Sbjct: 300  EHQNLVAPPED--VMGLAQNNVNTSEAGDP----RSRVQSHLLRRTQSHRATLSTLSSAL 353

Query: 1222 NSAERLVEAYFRGNPLGRNQEHPPPSAEDRDSFSSIGAVINSEGQVDTAIEID 1380
             SAERLVEAYFR NPLGRNQE PPP  +DRDSFSSIGAVINSE Q+DTA+EID
Sbjct: 354  TSAERLVEAYFRSNPLGRNQEQPPPPVDDRDSFSSIGAVINSESQLDTAVEID 406



 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 32/43 (74%), Positives = 36/43 (83%)
 Frame = +3

Query: 54  SDSMNLDLNLGPGPEPLAGAMANGAINLNDWIDEPFNRISEAV 182
           SD+MNLDLNLGPGPEP  G M+N A+NL+DWI EP  RISEAV
Sbjct: 6   SDAMNLDLNLGPGPEPETGPMSNEAVNLDDWIGEPLQRISEAV 48


>gb|AFK37436.1| unknown [Lotus japonicus]
          Length = 446

 Score =  425 bits (1092), Expect = e-116
 Identities = 235/358 (65%), Positives = 266/358 (74%), Gaps = 13/358 (3%)
 Frame = +1

Query: 346  VHHRIQPETWQRHL------------NISLELDHFLANSGNGGVLQAGEGSVAAEERETE 489
            VH  I PE    HL            NIS+EL++FL NSG+GG LQ GEGSVAAE R   
Sbjct: 65   VHFHIPPEAVHVHLPIPHLPIPPEAHNISMELNNFLVNSGHGGALQTGEGSVAAEGRL-- 122

Query: 490  SEVPKACEISNGGVTLDETSEKEEDVEKGTGGSDVGFFDCNICLDLAKDPVVTCCGHLFC 669
             EVPKACE  NG V++DETS+K++DVE+G+G +D  FFDCNICLDLA++PVVTCCGHLFC
Sbjct: 123  EEVPKACENING-VSVDETSQKKDDVERGSG-NDGDFFDCNICLDLAREPVVTCCGHLFC 180

Query: 670  WPCLYRWLYLQSDTKECPVCKGEVTVKSVTPIHGRGNNVPVHEEDSTLKIPLRPSARHVS 849
            W C+YRWL+L SD KECPVCKGEVT+KSVTPI+GRGNN    EEDSTLKIP  P AR V 
Sbjct: 181  WTCVYRWLHLHSDAKECPVCKGEVTLKSVTPIYGRGNNGRSSEEDSTLKIPPGPQARRV- 239

Query: 850  EDSDVRQTTQRSAFAMPVEEMIRRLGSRLDLNQDLVQVQPHEHDNVRQAAERTSSLLSRF 1029
                +RQT QR+AFA+PVEEMIRRLGSR+DL +DL  VQP+E DN R+ AERT+SLLSRF
Sbjct: 240  --ESLRQTIQRNAFALPVEEMIRRLGSRIDLTRDL--VQPNEPDNAREQAERTTSLLSRF 295

Query: 1030 LAGRGVRREHNNLGGEPQDDAMSTLAQNNVVGGGPLAAGNRRVQSLLLRRAQAHR-DRGT 1206
            L  RG+RRE N +  +PQDD +  L QNN VG       N RVQSLLLRR Q+HR    T
Sbjct: 296  LTSRGMRREQNPVAPQPQDDVVG-LPQNN-VGNAAEVGDNHRVQSLLLRRTQSHRATLTT 353

Query: 1207 FSSTLNSAERLVEAYFRGNPLGRNQEHPPPSAEDRDSFSSIGAVINSEGQVDTAIEID 1380
             SS L SAERL EAY R NPL RNQE PPP  EDRDSFSSIGAVINSE QVDTA EID
Sbjct: 354  LSSALTSAERLFEAYLRSNPLNRNQEQPPP-VEDRDSFSSIGAVINSESQVDTAAEID 410


>ref|XP_003521218.1| PREDICTED: uncharacterized protein LOC100782225 isoform 1 [Glycine
            max] gi|356504874|ref|XP_003521219.1| PREDICTED:
            uncharacterized protein LOC100782225 isoform 2 [Glycine
            max]
          Length = 442

 Score =  420 bits (1079), Expect = e-115
 Identities = 236/353 (66%), Positives = 264/353 (74%), Gaps = 4/353 (1%)
 Frame = +1

Query: 334  EAARVHHRIQPETWQRHLNISLELDHFLANSGNGGVLQAGEGSVAAEERETESEVPKACE 513
            EA R H +I PE      NIS+EL+HFL NSGNG  LQAGEGSVAAEER    EVPKACE
Sbjct: 75   EATR-HFQIPPEAH----NISVELNHFLVNSGNGSALQAGEGSVAAEERM--EEVPKACE 127

Query: 514  ISNGGVTLDETSEKEEDVEKGTGGSDVGFFDCNICLDLAKDPVVTCCGHLFCWPCLYRWL 693
              NG V  DE S+K+ D+EKG+G +D  FFDCNICLDLA+DPVVTCCGHLFCW CLYRWL
Sbjct: 128  NING-VAEDEASQKKGDIEKGSG-NDGDFFDCNICLDLARDPVVTCCGHLFCWSCLYRWL 185

Query: 694  YLQSDTKECPVCKGEVTVKSVTPIHGRGNNVPVHEEDSTLKIPLRPSARHVSEDSDVRQT 873
            +L SD KECPVCKGEVT+KSVTPI+GR NNV   EEDS LKIP RP A+ V     +RQT
Sbjct: 186  HLHSDAKECPVCKGEVTLKSVTPIYGRANNVRGPEEDSALKIPPRPQAKRV---ESLRQT 242

Query: 874  TQRSAFAMPVEEMIRRLGSRLDLNQDLVQVQPHEHDNVRQAAERTSSLLSRFLAGRGVRR 1053
             QR+AFA+PVEEMIRRLGSR++L +DL  VQP E D  R+ AERT+SLL RFL  +G+RR
Sbjct: 243  IQRNAFALPVEEMIRRLGSRIELTRDL--VQPPEPDAARETAERTTSLL-RFLTAQGIRR 299

Query: 1054 EHNNLGGEPQDDAMSTLAQNNV---VGGGPLAAGNRRVQSLLLRRAQAHR-DRGTFSSTL 1221
            EH NL   P+D  +  LAQNNV     G P      RVQS LLRR Q+HR    T SS L
Sbjct: 300  EHQNLVAPPED--VMGLAQNNVNTSEAGDP----RTRVQSHLLRRTQSHRATLSTLSSAL 353

Query: 1222 NSAERLVEAYFRGNPLGRNQEHPPPSAEDRDSFSSIGAVINSEGQVDTAIEID 1380
             SAERLVEAYFR NPLGRNQE PPP  EDRDSFSSIGAVINSE Q+DTA+EID
Sbjct: 354  TSAERLVEAYFRSNPLGRNQEQPPPPVEDRDSFSSIGAVINSESQLDTAVEID 406



 Score = 69.3 bits (168), Expect = 3e-09
 Identities = 31/43 (72%), Positives = 36/43 (83%)
 Frame = +3

Query: 54  SDSMNLDLNLGPGPEPLAGAMANGAINLNDWIDEPFNRISEAV 182
           SD+MNLDLNLGPGPEP  G ++N A+NL+DWI EP  RISEAV
Sbjct: 6   SDAMNLDLNLGPGPEPETGPISNEAVNLDDWIGEPLQRISEAV 48


>ref|XP_003625277.1| RING finger protein [Medicago truncatula] gi|355500292|gb|AES81495.1|
            RING finger protein [Medicago truncatula]
          Length = 453

 Score =  417 bits (1071), Expect = e-114
 Identities = 232/354 (65%), Positives = 263/354 (74%), Gaps = 3/354 (0%)
 Frame = +1

Query: 328  LHEAARVHH-RIQPETWQRHLNISLELDHFLANSGNGGVLQAGEGSVAAEERETESEVP- 501
            +H+ A   H  I PE      NIS+EL++FL NSGNG  LQAGEGSVAA ER  E E P 
Sbjct: 82   VHQLAPAPHIYIPPEA----RNISIELNNFLVNSGNGIGLQAGEGSVAAVERMEEEEAPL 137

Query: 502  KACEISNGGVTLDETSEKEEDVEKGTGGSDVGFFDCNICLDLAKDPVVTCCGHLFCWPCL 681
            KACE +N GV  DET +K +D  +  GG D  FFDCNICLDLAK+PV+TCCGHLFCW CL
Sbjct: 138  KACE-NNNGVMEDETLQKNKDDVEKAGGGDGDFFDCNICLDLAKEPVLTCCGHLFCWQCL 196

Query: 682  YRWLYLQSDTKECPVCKGEVTVKSVTPIHGRGNNVPVHEEDSTLKIPLRPSARHVSEDSD 861
            YRWL+L SD +ECPVCKGEVT+KSVTPI+GRGN+  V EEDSTLKIP RP A+ V     
Sbjct: 197  YRWLHLHSDARECPVCKGEVTIKSVTPIYGRGNSTRVLEEDSTLKIPPRPQAKRV---ES 253

Query: 862  VRQTTQRSAFAMPVEEMIRRLGSRLDLNQDLVQVQPHEHDNVRQAAERTSSLLSRFLAGR 1041
            +RQT QR+AFA PVEEMIRRLG+R+DL +DL   QP+E +N R  AERT+SLLSRFL  R
Sbjct: 254  LRQTLQRNAFAFPVEEMIRRLGNRIDLARDL--SQPNEPENARGTAERTTSLLSRFLTSR 311

Query: 1042 GVRREHNNLGGEPQDDAMSTLAQNNVVGGGPLAAGNRRVQSLLLRRAQAHR-DRGTFSST 1218
            G+RRE N +   P DDA S L QNN   G  L    RRVQSLLLRR+Q+HR    T SS 
Sbjct: 312  GMRREQNPV--PPPDDAAS-LNQNNDT-GAELGGDTRRVQSLLLRRSQSHRATLSTLSSA 367

Query: 1219 LNSAERLVEAYFRGNPLGRNQEHPPPSAEDRDSFSSIGAVINSEGQVDTAIEID 1380
            L SAERLVEAYFR NPLGRNQE PPPS +DRDSFSSI AVINSE QVDTA+EID
Sbjct: 368  LTSAERLVEAYFRSNPLGRNQEQPPPSGDDRDSFSSIAAVINSESQVDTAVEID 421



 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 27/42 (64%), Positives = 33/42 (78%)
 Frame = +3

Query: 54  SDSMNLDLNLGPGPEPLAGAMANGAINLNDWIDEPFNRISEA 179
           SD+MNLDLNLGP PEP  G++ N  +NL+ WI+EP  RISEA
Sbjct: 6   SDAMNLDLNLGPDPEPQTGSLGNEGLNLDHWIEEPLQRISEA 47


>ref|XP_002530725.1| rnf5, putative [Ricinus communis] gi|223529739|gb|EEF31679.1| rnf5,
            putative [Ricinus communis]
          Length = 427

 Score =  355 bits (910), Expect = 3e-95
 Identities = 201/363 (55%), Positives = 250/363 (68%), Gaps = 12/363 (3%)
 Frame = +1

Query: 328  LHEAARVHHRIQPE-TWQRHL------NISLELDHFLANSGNGGVLQAGEGSVAAEERET 486
            + EA R+ +R +    W+++        +S+EL+  + NS +   LQAGEGSVAAEER  
Sbjct: 44   IREAVRISNRARQRWRWRQYQFPPESHTLSVELNQLIGNSDSVSTLQAGEGSVAAEERT- 102

Query: 487  ESEVPKACEISNGGVTLDETSEKEEDVEKGTGGSDVGFFDCNICLDLAKDPVVTCCGHLF 666
             +EVPK CE +N G   D+ SEK  DVEKG+GG D  FFDCNICLDLA DPVVTCCGHLF
Sbjct: 103  -NEVPKMCE-NNNGFLEDDVSEKTGDVEKGSGG-DGSFFDCNICLDLATDPVVTCCGHLF 159

Query: 667  CWPCLYRWLYLQSDTKECPVCKGEVTVKSVTPIHGRGNNVPVHEEDSTLKIPLRPSARHV 846
            CWPCLYRWL++ SD KECPVCKGEVT+K+VTPI+GRG+N    EED  L+IP RP AR V
Sbjct: 160  CWPCLYRWLHVHSDAKECPVCKGEVTIKNVTPIYGRGSNTREPEEDLGLEIPHRPHARRV 219

Query: 847  SEDSDVRQTTQRSAFAMPVEEMIRRLGSRLDLNQDLVQVQPHEHDNVRQAAERTSSLLSR 1026
                  RQT QRS+F++P+EEMIRRLGSR DL +DL  +Q  + + VR+  +RT++LLSR
Sbjct: 220  ---ESWRQTIQRSSFSLPMEEMIRRLGSRFDLTRDLNPMQ--DSNGVREMGDRTNALLSR 274

Query: 1027 FLAGRGVRREHNNLGGEPQDDAMSTLAQNNVVGGGPLAAGN-RRVQSLLLRRAQAHRDR- 1200
             +  RG R E N +   P DD +            P AA   RR+ SLLLRR+Q++  R 
Sbjct: 275  IMTLRGQRAEQNPMA--PLDDIVDLTHSGT---SSPEAARQARRIHSLLLRRSQSNSQRS 329

Query: 1201 ---GTFSSTLNSAERLVEAYFRGNPLGRNQEHPPPSAEDRDSFSSIGAVINSEGQVDTAI 1371
                + +S LNSAERL+EAYFR +P GRNQ+ PP   +DRDSFSSI AVINSE QVDTA+
Sbjct: 330  STHNSHTSALNSAERLIEAYFRNHPTGRNQD-PPLPVDDRDSFSSIAAVINSESQVDTAV 388

Query: 1372 EID 1380
            EID
Sbjct: 389  EID 391



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 25/43 (58%), Positives = 35/43 (81%)
 Frame = +3

Query: 54  SDSMNLDLNLGPGPEPLAGAMANGAINLNDWIDEPFNRISEAV 182
           SD+MNLDLNLGPGPE  +G++++ A+N + W+D+P  RI EAV
Sbjct: 6   SDTMNLDLNLGPGPEVGSGSISSEAVNFDGWVDDPLERIREAV 48


Top