BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005741
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625160.1| Pentatricopeptide repeat-containing protein ...   231   8e-59
ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat...   192   3e-47
ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   189   3e-46
ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat...   189   3e-46
ref|XP_002864185.1| pentatricopeptide repeat-containing protein ...   179   5e-43

>ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124360204|gb|ABN08217.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355500175|gb|AES81378.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 596

 Score =  231 bits (589), Expect = 8e-59
 Identities = 111/164 (67%), Positives = 128/164 (78%)
 Frame = +1

Query: 130 YRNICNLLLSLTHTRSLPKGLQLHAHVIKSGLQTLPLLSHHLINFYSKTHLPHSSLHVFH 309
           YRN+CN LLSLT +RSLPKGLQLHAH+IK GLQT+PLLSHHLINFYSKTHLP+SSL +FH
Sbjct: 20  YRNLCNTLLSLTFSRSLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFH 79

Query: 310 DSPHKSPTTWSSLISSFSQNDLPHLALHSFRLMLRHSLPVDDHILPSAVKXXXXXXXXXX 489
           DSPHKS TTWSS+ISSF+QNDLP L+L+ FRLMLR  +P DDHI PSA K          
Sbjct: 80  DSPHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPV 139

Query: 490 XXXXXXXXXKTSFHLDLFVGSSLVDMYAKCAQIEHARKVFDEMP 621
                    KT++HLD+FVGSS++DMYAKC  I +A  VFDEMP
Sbjct: 140 AKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMP 183



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 2/150 (1%)
 Frame = +1

Query: 175 SLPKGLQLHAHVIKSGLQTLPLLSHHLINFYSKTHLPHSSLHVFHDSPHKSPTTWSSLIS 354
           SLP    LH   +K+       +   +I+ Y+K      + +VF + P+++  +WS LI 
Sbjct: 136 SLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIY 195

Query: 355 SFSQ--NDLPHLALHSFRLMLRHSLPVDDHILPSAVKXXXXXXXXXXXXXXXXXXXKTSF 528
            + Q   D   L L    L+   +  V+D  L S ++                   KTSF
Sbjct: 196 GYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSF 255

Query: 529 HLDLFVGSSLVDMYAKCAQIEHARKVFDEM 618
               FV SSL+ +Y+KC  +E A  VF+E+
Sbjct: 256 DSSCFVASSLISLYSKCGVVEEAYDVFEEV 285


>ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Glycine max]
          Length = 582

 Score =  192 bits (489), Expect = 3e-47
 Identities = 98/163 (60%), Positives = 112/163 (68%)
 Frame = +1

Query: 133 RNICNLLLSLTHTRSLPKGLQLHAHVIKSGLQTLPLLSHHLINFYSKTHLPHSSLHVFHD 312
           R+IC +L+  THTRSL KGLQLH  VIK G + +PL+ HHLINFYSKT+LPHSSL +F  
Sbjct: 8   RDICKVLVWFTHTRSLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDS 67

Query: 313 SPHKSPTTWSSLISSFSQNDLPHLALHSFRLMLRHSLPVDDHILPSAVKXXXXXXXXXXX 492
            PHKS TTWSS+ISSF+QNDLP  AL  FR MLRH L  DDH LP+A K           
Sbjct: 68  FPHKSATTWSSVISSFAQNDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLA 127

Query: 493 XXXXXXXXKTSFHLDLFVGSSLVDMYAKCAQIEHARKVFDEMP 621
                   KT+ H D+FVGSSLVD YAKC  +  ARKVFDEMP
Sbjct: 128 LSLHALSLKTAHHHDVFVGSSLVDTYAKCGDVNLARKVFDEMP 170



 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 2/156 (1%)
 Frame = +1

Query: 157 SLTHTRSLPKGLQLHAHVIKSGLQTLPLLSHHLINFYSKTHLPHSSLHVFHDSPHKSPTT 336
           S+    SLP  L LHA  +K+       +   L++ Y+K    + +  VF + PHK+  +
Sbjct: 117 SVAALSSLPLALSLHALSLKTAHHHDVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVS 176

Query: 337 WSSLISSFSQNDLPHLALHSFRLMLR--HSLPVDDHILPSAVKXXXXXXXXXXXXXXXXX 510
           WS +I  +SQ  L   AL+ F+  L   + + V+D  L S ++                 
Sbjct: 177 WSGMIYGYSQMGLDEEALNLFKRALEQDYDIRVNDFTLSSVLRVCSASTLFELGKQVHGL 236

Query: 511 XXKTSFHLDLFVGSSLVDMYAKCAQIEHARKVFDEM 618
             KTSF    FV SSL+ +Y+KC  +E   KVF+E+
Sbjct: 237 CFKTSFDSSCFVASSLISLYSKCGVVEGGYKVFEEV 272


>ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g52630-like [Cucumis
           sativus]
          Length = 598

 Score =  189 bits (480), Expect = 3e-46
 Identities = 96/165 (58%), Positives = 115/165 (69%)
 Frame = +1

Query: 127 NYRNICNLLLSLTHTRSLPKGLQLHAHVIKSGLQTLPLLSHHLINFYSKTHLPHSSLHVF 306
           NYR ICNLLLS T +RSL +GLQLHAH++K GLQT+PL+SH+LIN YSKT LP  SL VF
Sbjct: 24  NYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVF 83

Query: 307 HDSPHKSPTTWSSLISSFSQNDLPHLALHSFRLMLRHSLPVDDHILPSAVKXXXXXXXXX 486
            ++P KS TTWSS+IS+F+QN+ P LAL  FR ML   +  DDHI PSA K         
Sbjct: 84  DETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSD 143

Query: 487 XXXXXXXXXXKTSFHLDLFVGSSLVDMYAKCAQIEHARKVFDEMP 621
                     KT ++ D+FVGSSLVDMYAKC +I  AR +FDEMP
Sbjct: 144 VGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMP 188



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 41/145 (28%), Positives = 68/145 (46%)
 Frame = +1

Query: 187 GLQLHAHVIKSGLQTLPLLSHHLINFYSKTHLPHSSLHVFHDSPHKSPTTWSSLISSFSQ 366
           G  +H   +K+G      +   L++ Y+K      + H+F + P ++  +WS +I  ++Q
Sbjct: 145 GKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQ 204

Query: 367 NDLPHLALHSFRLMLRHSLPVDDHILPSAVKXXXXXXXXXXXXXXXXXXXKTSFHLDLFV 546
            D    AL  F+  L   + V+D    S ++                   K SF    FV
Sbjct: 205 LDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFV 264

Query: 547 GSSLVDMYAKCAQIEHARKVFDEMP 621
           GS+L+ +Y+KC  IE A +VFDE+P
Sbjct: 265 GSALISLYSKCGVIEGAYQVFDEIP 289


>ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Cucumis sativus]
          Length = 598

 Score =  189 bits (480), Expect = 3e-46
 Identities = 96/165 (58%), Positives = 115/165 (69%)
 Frame = +1

Query: 127 NYRNICNLLLSLTHTRSLPKGLQLHAHVIKSGLQTLPLLSHHLINFYSKTHLPHSSLHVF 306
           NYR ICNLLLS T +RSL +GLQLHAH++K GLQT+PL+SH+LIN YSKT LP  SL VF
Sbjct: 24  NYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVF 83

Query: 307 HDSPHKSPTTWSSLISSFSQNDLPHLALHSFRLMLRHSLPVDDHILPSAVKXXXXXXXXX 486
            ++P KS TTWSS+IS+F+QN+ P LAL  FR ML   +  DDHI PSA K         
Sbjct: 84  DETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSD 143

Query: 487 XXXXXXXXXXKTSFHLDLFVGSSLVDMYAKCAQIEHARKVFDEMP 621
                     KT ++ D+FVGSSLVDMYAKC +I  AR +FDEMP
Sbjct: 144 VGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMP 188



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 41/145 (28%), Positives = 68/145 (46%)
 Frame = +1

Query: 187 GLQLHAHVIKSGLQTLPLLSHHLINFYSKTHLPHSSLHVFHDSPHKSPTTWSSLISSFSQ 366
           G  +H   +K+G      +   L++ Y+K      + H+F + P ++  +WS +I  ++Q
Sbjct: 145 GKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQ 204

Query: 367 NDLPHLALHSFRLMLRHSLPVDDHILPSAVKXXXXXXXXXXXXXXXXXXXKTSFHLDLFV 546
            D    AL  F+  L   + V+D    S ++                   K SF    FV
Sbjct: 205 LDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFV 264

Query: 547 GSSLVDMYAKCAQIEHARKVFDEMP 621
           GS+L+ +Y+KC  IE A +VFDE+P
Sbjct: 265 GSALISLYSKCGVIEGAYQVFDEIP 289


>ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297310020|gb|EFH40444.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 588

 Score =  179 bits (453), Expect = 5e-43
 Identities = 88/165 (53%), Positives = 112/165 (67%)
 Frame = +1

Query: 127 NYRNICNLLLSLTHTRSLPKGLQLHAHVIKSGLQTLPLLSHHLINFYSKTHLPHSSLHVF 306
           NY  IC+LLLS   +RS+ KGLQLH +++KSGL  +PL++++LINFYSK+ LP  S   F
Sbjct: 14  NYNQICDLLLSSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAF 73

Query: 307 HDSPHKSPTTWSSLISSFSQNDLPHLALHSFRLMLRHSLPVDDHILPSAVKXXXXXXXXX 486
            DSP KS TTWSS+IS F+QN+LP ++L   R M+  SL  DDH+LPSA K         
Sbjct: 74  EDSPQKSATTWSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCD 133

Query: 487 XXXXXXXXXXKTSFHLDLFVGSSLVDMYAKCAQIEHARKVFDEMP 621
                     KT +  D+FVGSSLVDMYAKC +I +ARK+FDEMP
Sbjct: 134 IGKSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMP 178



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 40/145 (27%), Positives = 68/145 (46%)
 Frame = +1

Query: 187 GLQLHAHVIKSGLQTLPLLSHHLINFYSKTHLPHSSLHVFHDSPHKSPTTWSSLISSFSQ 366
           G  +H   +K+G      +   L++ Y+K      +  +F + P ++  TWS ++  ++Q
Sbjct: 135 GKSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQ 194

Query: 367 NDLPHLALHSFRLMLRHSLPVDDHILPSAVKXXXXXXXXXXXXXXXXXXXKTSFHLDLFV 546
                 AL  F+  L  +L V+D+   + +                    K+SF    FV
Sbjct: 195 MGENEEALWLFKEALFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFV 254

Query: 547 GSSLVDMYAKCAQIEHARKVFDEMP 621
           GSSLV +Y+KC  +E A +VFDE+P
Sbjct: 255 GSSLVSLYSKCGDLEGAYQVFDEVP 279