BLASTX nr result

ID: Glycyrrhiza24_contig00005728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005728
         (906 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236887.1| nonclathrin coat protein zeta1-COP [Glycine ...   312   8e-83
ref|XP_003542071.1| PREDICTED: coatomer subunit zeta-3-like [Gly...   304   2e-80
emb|CAI29266.1| coatomer zeta1 subunit [Medicago truncatula] gi|...   297   3e-78
ref|XP_003627132.1| Coatomer subunit zeta-3 [Medicago truncatula...   291   1e-76
gb|ACJ84000.1| unknown [Medicago truncatula]                          291   1e-76

>ref|NP_001236887.1| nonclathrin coat protein zeta1-COP [Glycine max]
           gi|356526001|ref|XP_003531608.1| PREDICTED: coatomer
           subunit zeta-1-like [Glycine max]
           gi|7259348|dbj|BAA92779.1| nonclathrin coat protein
           zeta1-COP [Glycine max] gi|255626379|gb|ACU13534.1|
           unknown [Glycine max]
          Length = 180

 Score =  312 bits (799), Expect = 8e-83
 Identities = 158/180 (87%), Positives = 164/180 (91%)
 Frame = +1

Query: 70  MASYGLCPSIKNILLLDSEGKRVAVKYYSDDWPTNNSKLAFEKFVFSKTVKTNARTEAEI 249
           MAS GLCPSIKNILLLDSEGKRVAVKYYSDDWPTNN+KLAFEKFVF+KTVKTNARTEAE+
Sbjct: 1   MASQGLCPSIKNILLLDSEGKRVAVKYYSDDWPTNNAKLAFEKFVFTKTVKTNARTEAEV 60

Query: 250 TLLENNVIIYKFVQDLHFFVTGGDDENELILVSVLQGFFDAVTLLLRNNVDKREAXXXXX 429
           TLLENN+IIYKFVQDLHFFVTGG+DENELIL SVLQGFFDAVTLLLR+NVDKREA     
Sbjct: 61  TLLENNIIIYKFVQDLHFFVTGGEDENELILASVLQGFFDAVTLLLRSNVDKREALENLD 120

Query: 430 XXXXXXXXXVDGGMILETNGPLIAEKVTSHSLDADAPLSEQTLTQAWATAREHLTRTLLK 609
                    VDGGMILETNGPLIAEKVTSHSLDADAPLSEQTLTQAWATAREHLTRTLLK
Sbjct: 121 LILLCLDEIVDGGMILETNGPLIAEKVTSHSLDADAPLSEQTLTQAWATAREHLTRTLLK 180


>ref|XP_003542071.1| PREDICTED: coatomer subunit zeta-3-like [Glycine max]
          Length = 181

 Score =  304 bits (778), Expect = 2e-80
 Identities = 154/181 (85%), Positives = 163/181 (90%), Gaps = 1/181 (0%)
 Frame = +1

Query: 70  MASYGLCPSIKNILLLDSEGKRVAVKYYSDDWPTNNSKLAFEKFVFSKTVKTNARTEAEI 249
           MASYG CPSIKNILLLDSEGKRVAVKY+SDDWPTNNSK+AFEKFVFSKTVKTNARTEAEI
Sbjct: 1   MASYGSCPSIKNILLLDSEGKRVAVKYFSDDWPTNNSKIAFEKFVFSKTVKTNARTEAEI 60

Query: 250 TLLENNVIIYKFVQDLHFFVTGGDDENELILVSVLQGFFDAVTLLLRNNVDKREAXXXXX 429
           TLL+NN+IIYKFVQDLHFFVTGGDD NE+IL SVLQGFFDA+TLLLRNNVDKREA     
Sbjct: 61  TLLDNNIIIYKFVQDLHFFVTGGDDANEIILASVLQGFFDAITLLLRNNVDKREALENLD 120

Query: 430 XXXXXXXXXVDGGMILETNGPLIAEKVTSHSLD-ADAPLSEQTLTQAWATAREHLTRTLL 606
                    VDGGMILETNGPLIAEKVTSHS+D A++PLSEQTLTQAWATAREHLTRTLL
Sbjct: 121 LILLCLDEIVDGGMILETNGPLIAEKVTSHSMDGAESPLSEQTLTQAWATAREHLTRTLL 180

Query: 607 K 609
           K
Sbjct: 181 K 181


>emb|CAI29266.1| coatomer zeta1 subunit [Medicago truncatula]
           gi|388493944|gb|AFK35038.1| unknown [Medicago
           truncatula] gi|388496304|gb|AFK36218.1| unknown
           [Medicago truncatula]
          Length = 180

 Score =  297 bits (760), Expect = 3e-78
 Identities = 150/179 (83%), Positives = 160/179 (89%)
 Frame = +1

Query: 70  MASYGLCPSIKNILLLDSEGKRVAVKYYSDDWPTNNSKLAFEKFVFSKTVKTNARTEAEI 249
           MAS GLCPSIKNILLLDSEGKRVAVKYYSDDWPTN+SKLAFEKFVF+KTVKTNARTEAEI
Sbjct: 1   MASNGLCPSIKNILLLDSEGKRVAVKYYSDDWPTNSSKLAFEKFVFTKTVKTNARTEAEI 60

Query: 250 TLLENNVIIYKFVQDLHFFVTGGDDENELILVSVLQGFFDAVTLLLRNNVDKREAXXXXX 429
           TLLENN+++YKFVQDLHFFVTGGDDENELIL SVLQGFFDAVTLLLR+NVDK EA     
Sbjct: 61  TLLENNIVVYKFVQDLHFFVTGGDDENELILSSVLQGFFDAVTLLLRSNVDKSEALENLD 120

Query: 430 XXXXXXXXXVDGGMILETNGPLIAEKVTSHSLDADAPLSEQTLTQAWATAREHLTRTLL 606
                    VDGG+ILETNGPLIAEKVTSH++DADAPLSEQTLTQAWATAR+  TRTLL
Sbjct: 121 LILLCLDEIVDGGIILETNGPLIAEKVTSHNMDADAPLSEQTLTQAWATARDTFTRTLL 179


>ref|XP_003627132.1| Coatomer subunit zeta-3 [Medicago truncatula]
            gi|355521154|gb|AET01608.1| Coatomer subunit zeta-3
            [Medicago truncatula]
          Length = 1280

 Score =  291 bits (745), Expect = 1e-76
 Identities = 146/175 (83%), Positives = 157/175 (89%)
 Frame = +1

Query: 82   GLCPSIKNILLLDSEGKRVAVKYYSDDWPTNNSKLAFEKFVFSKTVKTNARTEAEITLLE 261
            GLCPSIKNILLLDSEGKRVAVKYYSDDWPTN+SKLAFEKFVF++TVKTNARTEAEITLLE
Sbjct: 1105 GLCPSIKNILLLDSEGKRVAVKYYSDDWPTNSSKLAFEKFVFTETVKTNARTEAEITLLE 1164

Query: 262  NNVIIYKFVQDLHFFVTGGDDENELILVSVLQGFFDAVTLLLRNNVDKREAXXXXXXXXX 441
            NN+++YKFVQDLHFFVTGGDDENELIL SVLQGFFDAVTLLLR+NVDK EA         
Sbjct: 1165 NNIVVYKFVQDLHFFVTGGDDENELILSSVLQGFFDAVTLLLRSNVDKSEALENLDLILL 1224

Query: 442  XXXXXVDGGMILETNGPLIAEKVTSHSLDADAPLSEQTLTQAWATAREHLTRTLL 606
                 VDGG+ILETNGPLIAEKVTSH++DADAPLSEQTLTQAWATAR+  TRTLL
Sbjct: 1225 CLDEIVDGGIILETNGPLIAEKVTSHNMDADAPLSEQTLTQAWATARDTFTRTLL 1279


>gb|ACJ84000.1| unknown [Medicago truncatula]
          Length = 180

 Score =  291 bits (745), Expect = 1e-76
 Identities = 147/179 (82%), Positives = 157/179 (87%)
 Frame = +1

Query: 70  MASYGLCPSIKNILLLDSEGKRVAVKYYSDDWPTNNSKLAFEKFVFSKTVKTNARTEAEI 249
           MA  GLCPSIKNILLLDSEGKRVAVKYYSDDWPTN+SKLAFEKFVF+K VKTNARTEAEI
Sbjct: 1   MAPNGLCPSIKNILLLDSEGKRVAVKYYSDDWPTNSSKLAFEKFVFTKAVKTNARTEAEI 60

Query: 250 TLLENNVIIYKFVQDLHFFVTGGDDENELILVSVLQGFFDAVTLLLRNNVDKREAXXXXX 429
           TLLENN+++YKFVQDLHFFVTGGDDENEL L SVLQGFFDAVTLLLR+NVDK EA     
Sbjct: 61  TLLENNIVVYKFVQDLHFFVTGGDDENELTLSSVLQGFFDAVTLLLRSNVDKSEALENLD 120

Query: 430 XXXXXXXXXVDGGMILETNGPLIAEKVTSHSLDADAPLSEQTLTQAWATAREHLTRTLL 606
                    VDGG+ILETNGPLIAEKVTSH++DADAPLSEQTLTQAWATAR+  TRTLL
Sbjct: 121 LILLCLDEIVDGGIILETNGPLIAEKVTSHNMDADAPLSEQTLTQAWATARDTFTRTLL 179


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