BLASTX nr result

ID: Glycyrrhiza24_contig00005710 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005710
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550189.1| PREDICTED: zinc finger CCCH domain-containin...   145   3e-33
ref|XP_003529584.1| PREDICTED: zinc finger CCCH domain-containin...   143   1e-32
ref|XP_002884577.1| hypothetical protein ARALYDRAFT_477944 [Arab...   128   5e-28
ref|XP_003541660.1| PREDICTED: zinc finger CCCH domain-containin...   126   2e-27
ref|XP_003547210.1| PREDICTED: zinc finger CCCH domain-containin...   125   5e-27

>ref|XP_003550189.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
           [Glycine max]
          Length = 484

 Score =  145 bits (367), Expect = 3e-33
 Identities = 69/84 (82%), Positives = 74/84 (88%), Gaps = 1/84 (1%)
 Frame = +3

Query: 147 MERYGRASEGSQSDLSPEWTVGAG-ETGLEGNESVWQLGLVGGDSYPLRPDEADCIYYLR 323
           MERYGRASEGSQSD SPEWT+ AG + GLE  ES WQLGL G +SYP+RPDEADCIYYLR
Sbjct: 1   MERYGRASEGSQSDPSPEWTLAAGADAGLE--ESSWQLGLAGAESYPMRPDEADCIYYLR 58

Query: 324 TGFCGYGSRCRFNHPRDRGAVIGA 395
           TGFCGYG+RCRFNHPRDR AVIGA
Sbjct: 59  TGFCGYGTRCRFNHPRDRAAVIGA 82


>ref|XP_003529584.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like
           [Glycine max]
          Length = 484

 Score =  143 bits (361), Expect = 1e-32
 Identities = 69/84 (82%), Positives = 73/84 (86%), Gaps = 1/84 (1%)
 Frame = +3

Query: 147 MERYGRASEGSQSDLSPEWTVGAG-ETGLEGNESVWQLGLVGGDSYPLRPDEADCIYYLR 323
           MERYGRASEGSQSD SPEWTV A  + GLE  ES WQLGL G +SYP+RPDEADCIYYLR
Sbjct: 1   MERYGRASEGSQSDPSPEWTVAADVDAGLE--ESSWQLGLPGAESYPMRPDEADCIYYLR 58

Query: 324 TGFCGYGSRCRFNHPRDRGAVIGA 395
           TGFCGYG+RCRFNHPRDR AVIGA
Sbjct: 59  TGFCGYGTRCRFNHPRDRAAVIGA 82


>ref|XP_002884577.1| hypothetical protein ARALYDRAFT_477944 [Arabidopsis lyrata subsp.
           lyrata] gi|297330417|gb|EFH60836.1| hypothetical protein
           ARALYDRAFT_477944 [Arabidopsis lyrata subsp. lyrata]
          Length = 454

 Score =  128 bits (321), Expect = 5e-28
 Identities = 65/85 (76%), Positives = 69/85 (81%), Gaps = 3/85 (3%)
 Frame = +3

Query: 147 MERYGRASE-GSQSDLSPEWTVGAGETGLEGNESVWQLGLVGG--DSYPLRPDEADCIYY 317
           MERYGRA E GS+SD S EWT   GETGLE   S+W+LGL GG  +SYP RPDE DCIYY
Sbjct: 1   MERYGRAGEEGSRSDPSLEWTSHGGETGLEA--SMWRLGLSGGGGESYPERPDEPDCIYY 58

Query: 318 LRTGFCGYGSRCRFNHPRDRGAVIG 392
           LRTG CGYGSRCRFNHPRDRGAVIG
Sbjct: 59  LRTGVCGYGSRCRFNHPRDRGAVIG 83


>ref|XP_003541660.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
           [Glycine max]
          Length = 491

 Score =  126 bits (317), Expect = 2e-27
 Identities = 60/86 (69%), Positives = 67/86 (77%), Gaps = 3/86 (3%)
 Frame = +3

Query: 147 MERYGRASEGSQSDLSPEWTVGAGETGLEGNESVWQLGLVGG---DSYPLRPDEADCIYY 317
           ME+YGR+SEGS+SD SPEW     +TGLE  E VWQLG+ GG   +SYP RPDE DC YY
Sbjct: 1   MEQYGRSSEGSRSDPSPEWAEPEAQTGLE--EPVWQLGMGGGAGEESYPQRPDEVDCTYY 58

Query: 318 LRTGFCGYGSRCRFNHPRDRGAVIGA 395
           LRTGFCG+GSRCRFNHPRDR  V GA
Sbjct: 59  LRTGFCGFGSRCRFNHPRDRAVVAGA 84


>ref|XP_003547210.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
           [Glycine max]
          Length = 481

 Score =  125 bits (313), Expect = 5e-27
 Identities = 59/85 (69%), Positives = 67/85 (78%), Gaps = 2/85 (2%)
 Frame = +3

Query: 147 MERYGRASEGSQSDLSPEWTVGAGETGLEGNESVWQLGL--VGGDSYPLRPDEADCIYYL 320
           ME+YGR+SEGS+SD SPEW     +TGLE  E +WQLG+   G +SYP RPDE DC YYL
Sbjct: 1   MEQYGRSSEGSRSDPSPEWAGPEAQTGLE--EPMWQLGMGGAGEESYPQRPDEVDCTYYL 58

Query: 321 RTGFCGYGSRCRFNHPRDRGAVIGA 395
           RTGFCG+GSRCRFNHPRDR AV GA
Sbjct: 59  RTGFCGFGSRCRFNHPRDRAAVAGA 83


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