BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005692
         (874 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624935.1| DNA repair protein RAD5 [Medicago truncatula...   331   1e-88
ref|XP_003520482.1| PREDICTED: putative SWI/SNF-related matrix-a...   285   7e-75
ref|XP_002308876.1| chromatin remodeling complex subunit [Populu...   259   4e-67
ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|2026...   258   1e-66
sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related m...   258   1e-66

>ref|XP_003624935.1| DNA repair protein RAD5 [Medicago truncatula]
           gi|124360542|gb|ABN08552.1| SNF2-related; Zinc finger,
           RING-type; ATP-requiring DNA helicase RecQ [Medicago
           truncatula] gi|355499950|gb|AES81153.1| DNA repair
           protein RAD5 [Medicago truncatula]
          Length = 844

 Score =  331 bits (849), Expect = 1e-88
 Identities = 181/300 (60%), Positives = 212/300 (70%), Gaps = 9/300 (3%)
 Frame = -2

Query: 873 PCQVHIFSHFSSFDAVKDAFSISPLRLISHSDPSFTLSDSIAVKETRATVITQDP--DEN 700
           PCQ+HIF+H SSFDAV DAF+ S +  IS+SDPSFTLS S AVKETRA     D     N
Sbjct: 104 PCQIHIFAHQSSFDAVHDAFNGSNVHFISYSDPSFTLSHSAAVKETRADTFNSDSVTTGN 163

Query: 699 PSNKTLDAIF---HENLAAKNPLPEPLDAPSLFIKPKLLQHQREALAWLLHRECSTELPP 529
            ++K LD IF    ENLA+K  + EPL+ PS  IK +LLQHQ+EAL WL HRE + +LPP
Sbjct: 164 NNSKNLDQIFKLVRENLASKTLVSEPLNPPSSIIKSELLQHQKEALGWLYHRESTQDLPP 223

Query: 528 FWERRDGXXXXXXXXXXXXXXXNSRPNPLRGGIFADDMGLGKTLTLLSLIAHDKAQ--SV 355
           FWE + G                +RP PLRGGIFAD MGLGKTLTLLSLI++DK +  S 
Sbjct: 224 FWEEKVGNFVNVLTNYQTN----ARPEPLRGGIFADGMGLGKTLTLLSLISYDKMKMKSG 279

Query: 354 KKR-RLNVTETET-TKATLVVCPPSVISAWINQLEEHTFRGSLKTYMYYGERRTKDPEEL 181
           KKR R +V   E+ T  TL+VCPPSVIS WI QLEEHT RG+LK YMYYG+RRT+D EEL
Sbjct: 280 KKRGRSSVERVESETNGTLIVCPPSVISTWITQLEEHTNRGTLKVYMYYGDRRTQDAEEL 339

Query: 180 RKYDLVLTTYSTLGIEVNWGHAAAQKVEWWRVVLDEAHTIKNPNAAQSQAVFKLGAKRRW 1
           RKYD+VLTTY+TLG E+       +K+ W R+VLDEAHTIKN NA QSQAV  L AKRRW
Sbjct: 340 RKYDIVLTTYATLGAELRCSDTPVKKLGWRRIVLDEAHTIKNVNAGQSQAVIALNAKRRW 399


>ref|XP_003520482.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 1-like
            [Glycine max]
          Length = 823

 Score =  285 bits (730), Expect = 7e-75
 Identities = 161/319 (50%), Positives = 201/319 (63%), Gaps = 28/319 (8%)
 Frame = -2

Query: 873  PCQVHIFSHFSSFDAVKDAFSISPLRLISHSDPSFTLSDSIAVKETRATVITQDPDENPS 694
            PCQ+H+F+  S F AV++A   + L++I+ SD SFTLSDS+AVKETRA            
Sbjct: 106  PCQIHVFARVSDFSAVENAVEDAGLKIITGSDASFTLSDSVAVKETRA---------QKK 156

Query: 693  NKTLDAIF---HENLAAKNPLPEPLDAPSLFIKPKLLQHQREALAWLLHRECSTELPPFW 523
            + ++DAIF   + +   KNP  + L+ P   I+ +LLQHQ+E LAWL+HRE S +LPPFW
Sbjct: 157  SSSVDAIFKKVNRSYTGKNPAIQILEPPRTIIRTELLQHQKEGLAWLVHRENSDDLPPFW 216

Query: 522  ERRDGXXXXXXXXXXXXXXXNSRPNPLRGGIFADDMGLGKTLTLLSLIAHDKAQ------ 361
            E  +G                +RP+PLRGGIFAD+MGLGKTLTLLSLIA DK        
Sbjct: 217  EENEGKFVNILTDYQSD----NRPDPLRGGIFADEMGLGKTLTLLSLIAFDKKSQMGVSK 272

Query: 360  ---------SVKKRRLNVTETET----------TKATLVVCPPSVISAWINQLEEHTFRG 238
                     +++KRR+  +E E+          T ATLVVCPPSV+S WI QLEEHT  G
Sbjct: 273  KWRTDRKVVTLEKRRMRESENESESSSPEKGFRTNATLVVCPPSVMSTWITQLEEHTVPG 332

Query: 237  SLKTYMYYGERRTKDPEELRKYDLVLTTYSTLGIEVNWGHAAAQKVEWWRVVLDEAHTIK 58
            +LKTYMYYGERRT DP +L +YDLVLTTY  L  E       A+ + W R+VLDEAHTIK
Sbjct: 333  ALKTYMYYGERRTDDPFDLNRYDLVLTTYGILAGEHCMPKMPAKNMYWRRIVLDEAHTIK 392

Query: 57   NPNAAQSQAVFKLGAKRRW 1
            N NA QS AV KL A+ RW
Sbjct: 393  NFNALQSLAVSKLNAQCRW 411


>ref|XP_002308876.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222854852|gb|EEE92399.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 799

 Score =  259 bits (663), Expect = 4e-67
 Identities = 150/301 (49%), Positives = 186/301 (61%), Gaps = 10/301 (3%)
 Frame = -2

Query: 873 PCQVHIFSHFSSFDAVKDAFSISPLRLISHSDPSFTLSDSIAVKETRATVITQDPDENPS 694
           PCQVH+F+    F++VK A S   L L+S  +  F LS+++ VKE          ++   
Sbjct: 97  PCQVHVFARVEDFESVKTAISRGGLVLLSQMEVGFGLSEAMVVKEK---------NKKSG 147

Query: 693 NKTLDAIFH---ENLAAKNPLPEPLDAPSLFIKPKLLQHQREALAWLLHRECSTELPPFW 523
            K+LD IF    EN+  K  L   L+ P   IK +L +HQ+E L WL++RE S ELPPFW
Sbjct: 148 LKSLDEIFKLVDENVNKKGKLGA-LEPPKEVIKSQLFEHQKEGLWWLVNRENSGELPPFW 206

Query: 522 ERRDGXXXXXXXXXXXXXXXNSRPNPLRGGIFADDMGLGKTLTLLSLIAHDKAQS----V 355
           E +DG                 RP PLRGGIFADDMGLGKTL LLSLIA DK       V
Sbjct: 207 EEKDGEFVNVLTNYHTNR----RPEPLRGGIFADDMGLGKTLALLSLIAFDKCGGGTGVV 262

Query: 354 KKRRLNVTET---ETTKATLVVCPPSVISAWINQLEEHTFRGSLKTYMYYGERRTKDPEE 184
              + NV E    +    TL+VCPP+V S WI QLEEHT RGSL  YMYYGER T++ EE
Sbjct: 263 GGNKDNVAEEIGGDDEDTTLIVCPPAVFSTWITQLEEHTQRGSLGVYMYYGER-TREVEE 321

Query: 183 LRKYDLVLTTYSTLGIEVNWGHAAAQKVEWWRVVLDEAHTIKNPNAAQSQAVFKLGAKRR 4
           L+K+D+VLTTYSTL  E  W  +  +K++W RV+LDEAH IKN N+ QS+AV KL AKRR
Sbjct: 322 LKKHDIVLTTYSTLAAEDPWEDSPVKKIDWCRVILDEAHVIKNANSQQSRAVTKLNAKRR 381

Query: 3   W 1
           W
Sbjct: 382 W 382


>ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|20260624|gb|AAM13210.1|
            helicase-like transcription factor-like protein
            [Arabidopsis thaliana] gi|31711770|gb|AAP68241.1|
            At5g05130 [Arabidopsis thaliana]
            gi|332003449|gb|AED90832.1| DNA/RNA helicase [Arabidopsis
            thaliana]
          Length = 862

 Score =  258 bits (659), Expect = 1e-66
 Identities = 149/331 (45%), Positives = 185/331 (55%), Gaps = 40/331 (12%)
 Frame = -2

Query: 873  PCQVHIFSHFSSFDAVKDAFSISPLRLISHSDPSFTLSDSIAVKETRATVITQDPDENPS 694
            PCQ+H+F+   +   VK   S   L LIS SD SF LS+++ VKE            N  
Sbjct: 127  PCQIHVFAKLEASSTVKSTISRGGLVLISESDTSFGLSEAVVVKEQMG---------NGD 177

Query: 693  NKTLDAIFH---ENLAAKNPLPEPLDAPSLFIKPKLLQHQREALAWLLHRECSTELPPFW 523
             +++D IF    EN+     L    + P   IK +L  HQ+E L WLLHRE S ELPPFW
Sbjct: 178  KRSVDKIFKLVDENVKLMGKLVAA-EPPREVIKSELFAHQKEGLGWLLHREKSGELPPFW 236

Query: 522  ERRDGXXXXXXXXXXXXXXXNSRPNPLRGGIFADDMGLGKTLTLLSLIAHDK-------- 367
            E +DG                 RP+PLRGG+FADDMGLGKTLTLLSLIA D+        
Sbjct: 237  EEKDGEFLNTLTNYRSD----KRPDPLRGGVFADDMGLGKTLTLLSLIAFDRYGNASTST 292

Query: 366  -------------------------AQSVKKRRLNVTETE----TTKATLVVCPPSVISA 274
                                     ++SV +++L   +      + K TL+VCPPSVISA
Sbjct: 293  PTEEPLDGEGDKIEKKGKKRGRGKSSESVTRKKLKTDDVVGMNVSQKTTLIVCPPSVISA 352

Query: 273  WINQLEEHTFRGSLKTYMYYGERRTKDPEELRKYDLVLTTYSTLGIEVNWGHAAAQKVEW 94
            WI QLEEHT  G LK YMY+G  RT D  EL KYD+VLTTY TL +E +W  +  +K+EW
Sbjct: 353  WITQLEEHTVPGILKVYMYHGGERTDDVNELMKYDIVLTTYGTLAVEESWEDSPVKKMEW 412

Query: 93   WRVVLDEAHTIKNPNAAQSQAVFKLGAKRRW 1
             R++LDEAHTIKN NA QS+ V KL A RRW
Sbjct: 413  LRIILDEAHTIKNANAQQSRVVCKLKASRRW 443


>sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A member
            3-like 1; Short=SMARCA3-like protein 1
            gi|10178052|dbj|BAB11535.1| helicase-like transcription
            factor-like protein [Arabidopsis thaliana]
          Length = 881

 Score =  258 bits (659), Expect = 1e-66
 Identities = 149/331 (45%), Positives = 185/331 (55%), Gaps = 40/331 (12%)
 Frame = -2

Query: 873  PCQVHIFSHFSSFDAVKDAFSISPLRLISHSDPSFTLSDSIAVKETRATVITQDPDENPS 694
            PCQ+H+F+   +   VK   S   L LIS SD SF LS+++ VKE            N  
Sbjct: 146  PCQIHVFAKLEASSTVKSTISRGGLVLISESDTSFGLSEAVVVKEQMG---------NGD 196

Query: 693  NKTLDAIFH---ENLAAKNPLPEPLDAPSLFIKPKLLQHQREALAWLLHRECSTELPPFW 523
             +++D IF    EN+     L    + P   IK +L  HQ+E L WLLHRE S ELPPFW
Sbjct: 197  KRSVDKIFKLVDENVKLMGKLVAA-EPPREVIKSELFAHQKEGLGWLLHREKSGELPPFW 255

Query: 522  ERRDGXXXXXXXXXXXXXXXNSRPNPLRGGIFADDMGLGKTLTLLSLIAHDK-------- 367
            E +DG                 RP+PLRGG+FADDMGLGKTLTLLSLIA D+        
Sbjct: 256  EEKDGEFLNTLTNYRSD----KRPDPLRGGVFADDMGLGKTLTLLSLIAFDRYGNASTST 311

Query: 366  -------------------------AQSVKKRRLNVTETE----TTKATLVVCPPSVISA 274
                                     ++SV +++L   +      + K TL+VCPPSVISA
Sbjct: 312  PTEEPLDGEGDKIEKKGKKRGRGKSSESVTRKKLKTDDVVGMNVSQKTTLIVCPPSVISA 371

Query: 273  WINQLEEHTFRGSLKTYMYYGERRTKDPEELRKYDLVLTTYSTLGIEVNWGHAAAQKVEW 94
            WI QLEEHT  G LK YMY+G  RT D  EL KYD+VLTTY TL +E +W  +  +K+EW
Sbjct: 372  WITQLEEHTVPGILKVYMYHGGERTDDVNELMKYDIVLTTYGTLAVEESWEDSPVKKMEW 431

Query: 93   WRVVLDEAHTIKNPNAAQSQAVFKLGAKRRW 1
             R++LDEAHTIKN NA QS+ V KL A RRW
Sbjct: 432  LRIILDEAHTIKNANAQQSRVVCKLKASRRW 462