BLASTX nr result

ID: Glycyrrhiza24_contig00005689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005689
         (1172 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552007.1| PREDICTED: eukaryotic translation initiation...   322   e-128
ref|XP_003532029.1| PREDICTED: eukaryotic translation initiation...   316   e-127
ref|XP_003631117.1| Eukaryotic translation initiation factor 3 s...   316   e-127
ref|XP_003532031.1| PREDICTED: eukaryotic translation initiation...   314   e-126
gb|AFK35957.1| unknown [Medicago truncatula]                          313   e-126

>ref|XP_003552007.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-like
            [Glycine max]
          Length = 290

 Score =  322 bits (824), Expect(2) = e-128
 Identities = 160/179 (89%), Positives = 169/179 (94%), Gaps = 4/179 (2%)
 Frame = +2

Query: 479  LGSKAEEPK-AADPLSQFQKGAVLMVCRTCGKKGDHWTSRCPYKDLAQPAEGFIDKPAA- 652
            LG+K+EEPK A DPL+QFQKGAVLMVCRTCGKKGDHWTSRCPYKDLA P+EGF+DKPAA 
Sbjct: 112  LGAKSEEPKNAGDPLAQFQKGAVLMVCRTCGKKGDHWTSRCPYKDLAPPSEGFVDKPAAA 171

Query: 653  -TVDAAAGSTKGAYVPPGMRAGAERT-GSDMRRRNDENSVRVTNLSEDTREPDLMELFRP 826
             TV A AG+TKGAYVPPGMRAGAERT GSDMRRRNDENSVRVTNLSEDTREPDL+ELFRP
Sbjct: 172  DTVAATAGATKGAYVPPGMRAGAERTTGSDMRRRNDENSVRVTNLSEDTREPDLLELFRP 231

Query: 827  FGAVSRVYVAIDQKTGMSRGFGFVNFVSREDAQRAINKLNGYGYDSLILRVEWATPRTN 1003
            FG VSRVYVAIDQKTGMSRGFGFVNFV+REDAQRAINKLNGYGYD+LILRVEWATPR N
Sbjct: 232  FGPVSRVYVAIDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAN 290



 Score =  166 bits (420), Expect(2) = e-128
 Identities = 83/113 (73%), Positives = 88/113 (77%)
 Frame = +3

Query: 120 VAHQAEPAKLRWXXXXXXXXXXXXXXXPPRQVIGPDGNGIKKVIEYKFDDDGNKLKVXXX 299
           +AHQ EPAKLRW               PPRQVIGPD NGIKKVIEYKFD+DGNK+K+   
Sbjct: 1   MAHQGEPAKLRWGELEEDDGEDLDFLLPPRQVIGPDENGIKKVIEYKFDEDGNKVKITTT 60

Query: 300 XXXXKLANARLSKRAVERRSWTKFGDAVHEDVGSRLTMVSTEEILLERPKPLG 458
               KLANARLSKRAVERRSW KFGDAVHEDVG+RLTMVSTEEILLERPKPLG
Sbjct: 61  TRTRKLANARLSKRAVERRSWPKFGDAVHEDVGARLTMVSTEEILLERPKPLG 113


>ref|XP_003532029.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
            G-A-like isoform 1 [Glycine max]
            gi|356526852|ref|XP_003532030.1| PREDICTED: eukaryotic
            translation initiation factor 3 subunit G-A-like isoform
            2 [Glycine max]
          Length = 290

 Score =  316 bits (810), Expect(2) = e-127
 Identities = 159/179 (88%), Positives = 166/179 (92%), Gaps = 4/179 (2%)
 Frame = +2

Query: 479  LGSKAEEPK-AADPLSQFQKGAVLMVCRTCGKKGDHWTSRCPYKDLAQPAEGFIDKPAAT 655
            LG+K EEPK A DPL+QFQKGAVLMVCRTCGKKGDHWTSRCPYKDLA P+EGFIDKPAA 
Sbjct: 112  LGAKTEEPKNAGDPLAQFQKGAVLMVCRTCGKKGDHWTSRCPYKDLAPPSEGFIDKPAAA 171

Query: 656  VD--AAAGSTKGAYVPPGMRAGAERT-GSDMRRRNDENSVRVTNLSEDTREPDLMELFRP 826
                AAAG+TKGAYVPPGMRAGAERT GSDMRRRNDENSVRVTNLSEDTREPDL+ELFRP
Sbjct: 172  DAGAAAAGATKGAYVPPGMRAGAERTTGSDMRRRNDENSVRVTNLSEDTREPDLLELFRP 231

Query: 827  FGAVSRVYVAIDQKTGMSRGFGFVNFVSREDAQRAINKLNGYGYDSLILRVEWATPRTN 1003
            FG VSRVYVAIDQKTGMSRGFGFVNFV+REDAQRAI KLNGYGYD+LILRVEWATPR N
Sbjct: 232  FGPVSRVYVAIDQKTGMSRGFGFVNFVNREDAQRAIGKLNGYGYDNLILRVEWATPRAN 290



 Score =  166 bits (419), Expect(2) = e-127
 Identities = 82/113 (72%), Positives = 88/113 (77%)
 Frame = +3

Query: 120 VAHQAEPAKLRWXXXXXXXXXXXXXXXPPRQVIGPDGNGIKKVIEYKFDDDGNKLKVXXX 299
           +AHQ EPAKLRW               PPRQVIGPD NGIKKVIEYKFD+DGNK+K+   
Sbjct: 1   MAHQGEPAKLRWGELEEDDGEDLDFLLPPRQVIGPDENGIKKVIEYKFDEDGNKVKITTT 60

Query: 300 XXXXKLANARLSKRAVERRSWTKFGDAVHEDVGSRLTMVSTEEILLERPKPLG 458
               KLANARLSKRA+ERRSW KFGDAVHEDVG+RLTMVSTEEILLERPKPLG
Sbjct: 61  TRTRKLANARLSKRAIERRSWPKFGDAVHEDVGARLTMVSTEEILLERPKPLG 113


>ref|XP_003631117.1| Eukaryotic translation initiation factor 3 subunit [Medicago
            truncatula] gi|355525139|gb|AET05593.1| Eukaryotic
            translation initiation factor 3 subunit [Medicago
            truncatula]
          Length = 292

 Score =  316 bits (810), Expect(2) = e-127
 Identities = 157/178 (88%), Positives = 163/178 (91%), Gaps = 4/178 (2%)
 Frame = +2

Query: 479  LGSKAEEPKAADPLSQFQKGAVLMVCRTCGKKGDHWTSRCPYKDLAQPAEGFIDKPAAT- 655
            LGS  E+PK ADPLSQF KGAVLMVCRTCGKKGDHWTSRCPYKDLAQP E F+DKP AT 
Sbjct: 114  LGSNKEDPKTADPLSQFNKGAVLMVCRTCGKKGDHWTSRCPYKDLAQPPETFVDKPVATD 173

Query: 656  --VDAAAGSTKGAYVPPGMRAGAERT-GSDMRRRNDENSVRVTNLSEDTREPDLMELFRP 826
                A+AGS KGAYVPP +RAGAERT GSDMRRRNDENSVRVTNLSEDTREPDL+ELFRP
Sbjct: 174  AAPGASAGSAKGAYVPPSLRAGAERTTGSDMRRRNDENSVRVTNLSEDTREPDLLELFRP 233

Query: 827  FGAVSRVYVAIDQKTGMSRGFGFVNFVSREDAQRAINKLNGYGYDSLILRVEWATPRT 1000
            FGAVSRVYVAIDQKTGMSRGFGFVNFVSREDAQRAINKLNGYGYD+LILRVEWATPRT
Sbjct: 234  FGAVSRVYVAIDQKTGMSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPRT 291



 Score =  165 bits (418), Expect(2) = e-127
 Identities = 84/115 (73%), Positives = 88/115 (76%)
 Frame = +3

Query: 114 MGVAHQAEPAKLRWXXXXXXXXXXXXXXXPPRQVIGPDGNGIKKVIEYKFDDDGNKLKVX 293
           M  A QAEPAKLRW               PPRQVIGPD NGIK+VIEYKFDDDGNK+K+ 
Sbjct: 1   MAAAIQAEPAKLRWGELEEDDGEDLDFLLPPRQVIGPDENGIKRVIEYKFDDDGNKVKIT 60

Query: 294 XXXXXXKLANARLSKRAVERRSWTKFGDAVHEDVGSRLTMVSTEEILLERPKPLG 458
                 KLANARLSKRAVERRSW KFGDAVHEDVG+RLTMVSTEEILLERPKPLG
Sbjct: 61  TTTRTRKLANARLSKRAVERRSWPKFGDAVHEDVGARLTMVSTEEILLERPKPLG 115


>ref|XP_003532031.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
            G-A-like isoform 3 [Glycine max]
          Length = 314

 Score =  314 bits (805), Expect(2) = e-126
 Identities = 162/193 (83%), Positives = 170/193 (88%), Gaps = 12/193 (6%)
 Frame = +2

Query: 461  TFLSFLLG--------SKAEEPK-AADPLSQFQKGAVLMVCRTCGKKGDHWTSRCPYKDL 613
            +F SF LG        +K EEPK A DPL+QFQKGAVLMVCRTCGKKGDHWTSRCPYKDL
Sbjct: 122  SFFSFNLGFSVIARICAKTEEPKNAGDPLAQFQKGAVLMVCRTCGKKGDHWTSRCPYKDL 181

Query: 614  AQPAEGFIDKPAATVD--AAAGSTKGAYVPPGMRAGAERT-GSDMRRRNDENSVRVTNLS 784
            A P+EGFIDKPAA     AAAG+TKGAYVPPGMRAGAERT GSDMRRRNDENSVRVTNLS
Sbjct: 182  APPSEGFIDKPAAADAGAAAAGATKGAYVPPGMRAGAERTTGSDMRRRNDENSVRVTNLS 241

Query: 785  EDTREPDLMELFRPFGAVSRVYVAIDQKTGMSRGFGFVNFVSREDAQRAINKLNGYGYDS 964
            EDTREPDL+ELFRPFG VSRVYVAIDQKTGMSRGFGFVNFV+REDAQRAI KLNGYGYD+
Sbjct: 242  EDTREPDLLELFRPFGPVSRVYVAIDQKTGMSRGFGFVNFVNREDAQRAIGKLNGYGYDN 301

Query: 965  LILRVEWATPRTN 1003
            LILRVEWATPR N
Sbjct: 302  LILRVEWATPRAN 314



 Score =  166 bits (419), Expect(2) = e-126
 Identities = 82/113 (72%), Positives = 88/113 (77%)
 Frame = +3

Query: 120 VAHQAEPAKLRWXXXXXXXXXXXXXXXPPRQVIGPDGNGIKKVIEYKFDDDGNKLKVXXX 299
           +AHQ EPAKLRW               PPRQVIGPD NGIKKVIEYKFD+DGNK+K+   
Sbjct: 1   MAHQGEPAKLRWGELEEDDGEDLDFLLPPRQVIGPDENGIKKVIEYKFDEDGNKVKITTT 60

Query: 300 XXXXKLANARLSKRAVERRSWTKFGDAVHEDVGSRLTMVSTEEILLERPKPLG 458
               KLANARLSKRA+ERRSW KFGDAVHEDVG+RLTMVSTEEILLERPKPLG
Sbjct: 61  TRTRKLANARLSKRAIERRSWPKFGDAVHEDVGARLTMVSTEEILLERPKPLG 113


>gb|AFK35957.1| unknown [Medicago truncatula]
          Length = 292

 Score =  313 bits (803), Expect(2) = e-126
 Identities = 156/178 (87%), Positives = 162/178 (91%), Gaps = 4/178 (2%)
 Frame = +2

Query: 479  LGSKAEEPKAADPLSQFQKGAVLMVCRTCGKKGDHWTSRCPYKDLAQPAEGFIDKPAAT- 655
            LGS  E+PK ADPLSQF KGAVLMVCRTCGKKGDHWTSRCPYKDLAQP E F+DKP AT 
Sbjct: 114  LGSNKEDPKTADPLSQFNKGAVLMVCRTCGKKGDHWTSRCPYKDLAQPPETFVDKPVATD 173

Query: 656  --VDAAAGSTKGAYVPPGMRAGAERT-GSDMRRRNDENSVRVTNLSEDTREPDLMELFRP 826
                A+AGS KGAYVPP +RAGAERT GSDMRRRNDENSVRVTNLSEDTREPDL+ELFRP
Sbjct: 174  AAPGASAGSAKGAYVPPSLRAGAERTTGSDMRRRNDENSVRVTNLSEDTREPDLLELFRP 233

Query: 827  FGAVSRVYVAIDQKTGMSRGFGFVNFVSREDAQRAINKLNGYGYDSLILRVEWATPRT 1000
            FGAVSRVYVAI QKTGMSRGFGFVNFVSREDAQRAINKLNGYGYD+LILRVEWATPRT
Sbjct: 234  FGAVSRVYVAIGQKTGMSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPRT 291



 Score =  165 bits (418), Expect(2) = e-126
 Identities = 84/115 (73%), Positives = 88/115 (76%)
 Frame = +3

Query: 114 MGVAHQAEPAKLRWXXXXXXXXXXXXXXXPPRQVIGPDGNGIKKVIEYKFDDDGNKLKVX 293
           M  A QAEPAKLRW               PPRQVIGPD NGIK+VIEYKFDDDGNK+K+ 
Sbjct: 1   MAAAIQAEPAKLRWGELEEDDGEDLDFLLPPRQVIGPDENGIKRVIEYKFDDDGNKVKIT 60

Query: 294 XXXXXXKLANARLSKRAVERRSWTKFGDAVHEDVGSRLTMVSTEEILLERPKPLG 458
                 KLANARLSKRAVERRSW KFGDAVHEDVG+RLTMVSTEEILLERPKPLG
Sbjct: 61  TTTRTRKLANARLSKRAVERRSWPKFGDAVHEDVGARLTMVSTEEILLERPKPLG 115


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