BLASTX nr result

ID: Glycyrrhiza24_contig00005653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005653
         (717 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238189.1| uncharacterized protein LOC100500188 [Glycin...   160   3e-37
ref|XP_002331425.1| predicted protein [Populus trichocarpa] gi|2...   159   4e-37
ref|XP_002308136.1| predicted protein [Populus trichocarpa] gi|2...   159   7e-37
ref|NP_001236318.1| uncharacterized protein LOC100305504 [Glycin...   157   2e-36
ref|XP_002273671.1| PREDICTED: 30S ribosomal protein S17 [Vitis ...   157   3e-36

>ref|NP_001238189.1| uncharacterized protein LOC100500188 [Glycine max]
           gi|255629613|gb|ACU15154.1| unknown [Glycine max]
          Length = 101

 Score =  160 bits (404), Expect = 3e-37
 Identities = 77/87 (88%), Positives = 82/87 (94%)
 Frame = -2

Query: 620 MKQLVGMVVSNKMQKSVVVAVDRLFHHKLYNRFVKRTSKFMAHDEHNLCNIGDRVRLDPS 441
           MKQ+VG VVSNKMQKSVVVAVDRLF+HKLY+R+VKRTSKFMAHDEHN CNIGDRVRLDPS
Sbjct: 1   MKQVVGTVVSNKMQKSVVVAVDRLFYHKLYDRYVKRTSKFMAHDEHNHCNIGDRVRLDPS 60

Query: 440 RPLSKRKHWAVAEILKKARIYAPHSLP 360
           RPLSK KHWAVAEILKKARIY P S+P
Sbjct: 61  RPLSKHKHWAVAEILKKARIYVPPSMP 87


>ref|XP_002331425.1| predicted protein [Populus trichocarpa] gi|222873639|gb|EEF10770.1|
           predicted protein [Populus trichocarpa]
          Length = 105

 Score =  159 bits (403), Expect = 4e-37
 Identities = 77/85 (90%), Positives = 81/85 (95%)
 Frame = -2

Query: 620 MKQLVGMVVSNKMQKSVVVAVDRLFHHKLYNRFVKRTSKFMAHDEHNLCNIGDRVRLDPS 441
           MK +VGMVVSNKMQKSVVVAVDRLFHHKLYNR+VKRTSKFMAHDE++LCNIGDRVRLDPS
Sbjct: 1   MKSVVGMVVSNKMQKSVVVAVDRLFHHKLYNRYVKRTSKFMAHDENDLCNIGDRVRLDPS 60

Query: 440 RPLSKRKHWAVAEILKKARIYAPHS 366
           RPLSKRKHW VAEILKKARIY P S
Sbjct: 61  RPLSKRKHWVVAEILKKARIYVPPS 85


>ref|XP_002308136.1| predicted protein [Populus trichocarpa] gi|222854112|gb|EEE91659.1|
           predicted protein [Populus trichocarpa]
          Length = 105

 Score =  159 bits (401), Expect = 7e-37
 Identities = 77/85 (90%), Positives = 81/85 (95%)
 Frame = -2

Query: 620 MKQLVGMVVSNKMQKSVVVAVDRLFHHKLYNRFVKRTSKFMAHDEHNLCNIGDRVRLDPS 441
           MK +VGMVVSNKMQKSVVVAVDRLFHHKLYNR+VKRTSKFMAHDE+NLCNIGDRVRLDPS
Sbjct: 1   MKSVVGMVVSNKMQKSVVVAVDRLFHHKLYNRYVKRTSKFMAHDENNLCNIGDRVRLDPS 60

Query: 440 RPLSKRKHWAVAEILKKARIYAPHS 366
           RPLSKRK+W VAEILKKARIY P S
Sbjct: 61  RPLSKRKNWVVAEILKKARIYVPPS 85


>ref|NP_001236318.1| uncharacterized protein LOC100305504 [Glycine max]
           gi|255625719|gb|ACU13204.1| unknown [Glycine max]
          Length = 101

 Score =  157 bits (398), Expect = 2e-36
 Identities = 76/90 (84%), Positives = 83/90 (92%)
 Frame = -2

Query: 620 MKQLVGMVVSNKMQKSVVVAVDRLFHHKLYNRFVKRTSKFMAHDEHNLCNIGDRVRLDPS 441
           MKQ+VGMVVSNKMQKSVVVAVDRLF+HKLY+R+VKRTSKFMAHDE+NLCNIGD+VRLDPS
Sbjct: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYDRYVKRTSKFMAHDENNLCNIGDKVRLDPS 60

Query: 440 RPLSKRKHWAVAEILKKARIYAPHSLPEFD 351
           RPLSK KHW VAEILKKA+IY P S P  D
Sbjct: 61  RPLSKHKHWVVAEILKKAQIYVPLSTPASD 90


>ref|XP_002273671.1| PREDICTED: 30S ribosomal protein S17 [Vitis vinifera]
           gi|297745104|emb|CBI38943.3| unnamed protein product
           [Vitis vinifera]
          Length = 99

 Score =  157 bits (396), Expect = 3e-36
 Identities = 75/83 (90%), Positives = 79/83 (95%)
 Frame = -2

Query: 620 MKQLVGMVVSNKMQKSVVVAVDRLFHHKLYNRFVKRTSKFMAHDEHNLCNIGDRVRLDPS 441
           MK +VGMVVSNKMQKSVVVAVDRLFH+KL+NR+VKRTSKFMAHDEHNLCNIGDRVRLDPS
Sbjct: 1   MKPVVGMVVSNKMQKSVVVAVDRLFHNKLFNRYVKRTSKFMAHDEHNLCNIGDRVRLDPS 60

Query: 440 RPLSKRKHWAVAEILKKARIYAP 372
           RPLSK KHW VAEILKKARIY P
Sbjct: 61  RPLSKHKHWVVAEILKKARIYVP 83


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