BLASTX nr result

ID: Glycyrrhiza24_contig00005636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005636
         (1562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553001.1| PREDICTED: nuclear transcription factor Y su...   253   7e-65
ref|XP_003532175.1| PREDICTED: nuclear transcription factor Y su...   252   2e-64
gb|AFK49662.1| nuclear transcription factor Y subunit B12 [Medic...   249   1e-63
ref|XP_003617812.1| Nuclear transcription factor Y subunit B-3 [...   230   7e-58
gb|AFK41105.1| unknown [Medicago truncatula]                          230   7e-58

>ref|XP_003553001.1| PREDICTED: nuclear transcription factor Y subunit B-3-like [Glycine
           max]
          Length = 188

 Score =  253 bits (647), Expect = 7e-65
 Identities = 135/162 (83%), Positives = 138/162 (85%), Gaps = 4/162 (2%)
 Frame = -1

Query: 866 MADSDNDXXXXXXXXXXXXXXSEMSPREQDRFLPIANVSRIMKKALPANAKISKDAKETV 687
           MADSDND               EMSPREQDRFLPIANVSRIMKKALPANAKISKDAKETV
Sbjct: 1   MADSDNDSGGAHNAGKGS----EMSPREQDRFLPIANVSRIMKKALPANAKISKDAKETV 56

Query: 686 QECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEG 507
           QECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFE+YVEPLK YLQRFREMEG
Sbjct: 57  QECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKGYLQRFREMEG 116

Query: 506 EKTVAARDKDA-PPNNASNSPFESGSYGA---GIMMHQGHVY 393
           EKTVAARDKDA PP NA+NS +ES SY A   GIMMHQGHVY
Sbjct: 117 EKTVAARDKDAPPPTNATNSAYESPSYAAAPGGIMMHQGHVY 158


>ref|XP_003532175.1| PREDICTED: nuclear transcription factor Y subunit B-3-like [Glycine
           max]
          Length = 191

 Score =  252 bits (643), Expect = 2e-64
 Identities = 134/165 (81%), Positives = 138/165 (83%), Gaps = 7/165 (4%)
 Frame = -1

Query: 866 MADSDNDXXXXXXXXXXXXXXSEMSPREQDRFLPIANVSRIMKKALPANAKISKDAKETV 687
           MADSDND               EMSPREQDRFLPIANVSRIMKKALPANAKISKDAKETV
Sbjct: 1   MADSDNDSGGAHNGGKGS----EMSPREQDRFLPIANVSRIMKKALPANAKISKDAKETV 56

Query: 686 QECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEG 507
           QECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFE+YVEPLK YLQRFREMEG
Sbjct: 57  QECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKGYLQRFREMEG 116

Query: 506 EKTVAARDKDAPP-NNASNSPFESGSYGA------GIMMHQGHVY 393
           EKTVAARDKDAPP  NA+NS +ES +Y A      GIMMHQGHVY
Sbjct: 117 EKTVAARDKDAPPLTNATNSAYESANYAAAAAVPGGIMMHQGHVY 161


>gb|AFK49662.1| nuclear transcription factor Y subunit B12 [Medicago truncatula]
          Length = 190

 Score =  249 bits (637), Expect = 1e-63
 Identities = 132/162 (81%), Positives = 135/162 (83%), Gaps = 4/162 (2%)
 Frame = -1

Query: 866 MADSDNDXXXXXXXXXXXXXXSEMSPREQDRFLPIANVSRIMKKALPANAKISKDAKETV 687
           MADSDND               EMSPREQDRFLPIANVSRIMKKALPANAKISKDAKETV
Sbjct: 1   MADSDNDSGGPHGGGSNAHGS-EMSPREQDRFLPIANVSRIMKKALPANAKISKDAKETV 59

Query: 686 QECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEG 507
           QECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK YLQRFREMEG
Sbjct: 60  QECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKGYLQRFREMEG 119

Query: 506 EKTVAARDKDAPPNNAS--NSPFESGSY--GAGIMMHQGHVY 393
           EKTV ARDKDAP  + S  NS +ESG Y  G G+MMHQGHVY
Sbjct: 120 EKTVGARDKDAPQGSGSVTNSSYESGGYGGGGGVMMHQGHVY 161


>ref|XP_003617812.1| Nuclear transcription factor Y subunit B-3 [Medicago truncatula]
           gi|355519147|gb|AET00771.1| Nuclear transcription factor
           Y subunit B-3 [Medicago truncatula]
           gi|388523229|gb|AFK49667.1| nuclear transcription factor
           Y subunit B17 [Medicago truncatula]
          Length = 187

 Score =  230 bits (587), Expect = 7e-58
 Identities = 124/164 (75%), Positives = 136/164 (82%), Gaps = 6/164 (3%)
 Frame = -1

Query: 866 MADSDNDXXXXXXXXXXXXXXSEMSPREQDRFLPIANVSRIMKKALPANAKISKDAKETV 687
           MADSDN+               E+SPREQDRFLPIANVSRIMKKALPANAKISKDAKETV
Sbjct: 1   MADSDNESGGAPNAGNS-----ELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETV 55

Query: 686 QECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEG 507
           QECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK+YLQRFRE+EG
Sbjct: 56  QECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQRFREIEG 115

Query: 506 EKTVAARDKD-APPNNASNSPFESGS--YGAGIMM---HQGHVY 393
           EKTVAARDKD   P+++S+S F+ G+     G++M   HQGHVY
Sbjct: 116 EKTVAARDKDGVAPSSSSSSVFDYGAPPPQVGLIMHHQHQGHVY 159


>gb|AFK41105.1| unknown [Medicago truncatula]
          Length = 184

 Score =  230 bits (587), Expect = 7e-58
 Identities = 124/164 (75%), Positives = 136/164 (82%), Gaps = 6/164 (3%)
 Frame = -1

Query: 866 MADSDNDXXXXXXXXXXXXXXSEMSPREQDRFLPIANVSRIMKKALPANAKISKDAKETV 687
           MADSDN+               E+SPREQDRFLPIANVSRIMKKALPANAKISKDAKETV
Sbjct: 1   MADSDNESGGAPNAGNS-----ELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETV 55

Query: 686 QECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEG 507
           QECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK+YLQRFRE+EG
Sbjct: 56  QECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQRFREIEG 115

Query: 506 EKTVAARDKD-APPNNASNSPFESGS--YGAGIMM---HQGHVY 393
           EKTVAARDKD   P+++S+S F+ G+     G++M   HQGHVY
Sbjct: 116 EKTVAARDKDGVAPSSSSSSVFDYGAPPPQVGLIMHHQHQGHVY 159


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