BLASTX nr result

ID: Glycyrrhiza24_contig00005620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005620
         (1905 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531188.1| PREDICTED: F-box/kelch-repeat protein At1g67...   685   0.0  
ref|XP_003538556.1| PREDICTED: F-box/kelch-repeat protein At1g67...   662   0.0  
ref|XP_002272745.1| PREDICTED: F-box/kelch-repeat protein At1g67...   633   e-179
ref|XP_003601804.1| F-box family protein [Medicago truncatula] g...   625   e-177
ref|XP_002327284.1| predicted protein [Populus trichocarpa] gi|2...   613   e-173

>ref|XP_003531188.1| PREDICTED: F-box/kelch-repeat protein At1g67480-like [Glycine max]
          Length = 388

 Score =  685 bits (1768), Expect = 0.0
 Identities = 335/389 (86%), Positives = 352/389 (90%)
 Frame = +3

Query: 495  MPGFVAGKKRFTETNMCFSDLANRDKSTPSKGNHCVRSEALXXXXXXXXSSILPGLPDDV 674
            MP FVA KK F E NMCF++LAN D+ T +K NH VRSEAL        S ILPGLPDDV
Sbjct: 1    MPSFVAEKKIFVEPNMCFTNLANHDRPTLTKNNHYVRSEALDDDDDGT-SPILPGLPDDV 59

Query: 675  SKYCLALVPRSNFPAMGGVCKRWRRFIQSKELITVRKLAGKLEEWLYILTADSEGKGSHW 854
            SK+CLALVPRSNFPAMGGVCKRWR FI+SKE ITVRKLAG  EEWLYILTA SEGKGSHW
Sbjct: 60   SKHCLALVPRSNFPAMGGVCKRWRGFIRSKEFITVRKLAGMHEEWLYILTAGSEGKGSHW 119

Query: 855  EVMDSLGHNRRSLPPMPGPGKAEFGVVVLNGKLLVMAGYSSIDGTACASAEVYQYNSCLN 1034
            EVMD LGHNRRSLPPMPGP KA FGVVVLNGKLLVMAGYSSIDGTA  SAEVYQY+SCLN
Sbjct: 120  EVMDCLGHNRRSLPPMPGPAKAGFGVVVLNGKLLVMAGYSSIDGTASVSAEVYQYDSCLN 179

Query: 1035 SWSGLSNMNVARYDFACAEVNGLVYAVGGHGANGDSLSSAEVYDPDTDKWTLIESLRRPR 1214
            SWS LS+MNVARYDFACAEV+GLVYAVGG+GA GDSLSSAEVYD DTDKWT IESLRRPR
Sbjct: 180  SWSRLSSMNVARYDFACAEVDGLVYAVGGYGATGDSLSSAEVYDLDTDKWTPIESLRRPR 239

Query: 1215 WGCFACGFEGKLYVMGGRSSFTIGNSKFVDVYNPEKHKWCEMKNGCVMVTAHAVLGKKLF 1394
            WGCFACGFEGKLYVMGGRSSFTIGNSKFVDVYNPEKH WCEMKNGCVMVTA+AVL KKLF
Sbjct: 240  WGCFACGFEGKLYVMGGRSSFTIGNSKFVDVYNPEKHGWCEMKNGCVMVTAYAVLEKKLF 299

Query: 1395 CMEWKNQRKLAIFSPEDNSWEMVPVPLTGSSSIGFRFGILNGKLLLFSVKEEPTYKTLLY 1574
            CMEWKNQRKLAIF+PEDNSW+MVPVPLTGSSSIGFRFGIL+GKLLLFS++EEP+YKTLLY
Sbjct: 300  CMEWKNQRKLAIFNPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEPSYKTLLY 359

Query: 1575 DPNAAPGCEWQTSDIRPSGLCLCSVTIKA 1661
            DPNAAPG EW TSDIRPSGLCLCSVTIKA
Sbjct: 360  DPNAAPGSEWHTSDIRPSGLCLCSVTIKA 388


>ref|XP_003538556.1| PREDICTED: F-box/kelch-repeat protein At1g67480-like [Glycine max]
          Length = 385

 Score =  662 bits (1707), Expect = 0.0
 Identities = 318/389 (81%), Positives = 343/389 (88%)
 Frame = +3

Query: 495  MPGFVAGKKRFTETNMCFSDLANRDKSTPSKGNHCVRSEALXXXXXXXXSSILPGLPDDV 674
            MPGF  GKKRF + NMCF++L N+DKST S+ NHC+  EAL        S ILPGLPDDV
Sbjct: 1    MPGFTVGKKRFIQPNMCFTNLINQDKSTLSQNNHCLFPEALNKDY----SPILPGLPDDV 56

Query: 675  SKYCLALVPRSNFPAMGGVCKRWRRFIQSKELITVRKLAGKLEEWLYILTADSEGKGSHW 854
            ++YCLALVPRSNFPAMGGVCK WR FIQSKE  TVRKLAG LEEWLY LT D EGK S+W
Sbjct: 57   AEYCLALVPRSNFPAMGGVCKIWRSFIQSKEFATVRKLAGMLEEWLYFLTTDCEGKESYW 116

Query: 855  EVMDSLGHNRRSLPPMPGPGKAEFGVVVLNGKLLVMAGYSSIDGTACASAEVYQYNSCLN 1034
            EVMD LGH  RSLPPMPGPGKA F VVVLNGKLLVMAGYS I+GTA ASAEVYQY+SCLN
Sbjct: 117  EVMDCLGHKCRSLPPMPGPGKAGFQVVVLNGKLLVMAGYSVIEGTAFASAEVYQYDSCLN 176

Query: 1035 SWSGLSNMNVARYDFACAEVNGLVYAVGGHGANGDSLSSAEVYDPDTDKWTLIESLRRPR 1214
            SWS LS+MNV+RYDFACAEVNGLVYAVGG+G NGDSLSSAEVYDPDTDKW LIESLRRPR
Sbjct: 177  SWSRLSDMNVSRYDFACAEVNGLVYAVGGYGVNGDSLSSAEVYDPDTDKWALIESLRRPR 236

Query: 1215 WGCFACGFEGKLYVMGGRSSFTIGNSKFVDVYNPEKHKWCEMKNGCVMVTAHAVLGKKLF 1394
            WGCFACGFEGKLYVMGGRSSFTIGNSKFVD+YNPE+H WCE+KNGCVMVTAHAVLGKKLF
Sbjct: 237  WGCFACGFEGKLYVMGGRSSFTIGNSKFVDIYNPERHSWCEIKNGCVMVTAHAVLGKKLF 296

Query: 1395 CMEWKNQRKLAIFSPEDNSWEMVPVPLTGSSSIGFRFGILNGKLLLFSVKEEPTYKTLLY 1574
            C+EWKNQRKLAIFSPEDNSW+MVPVPLTGSSSIGFRFGIL+GKLLLF ++ E  ++TLLY
Sbjct: 297  CIEWKNQRKLAIFSPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFPLEAETAFQTLLY 356

Query: 1575 DPNAAPGCEWQTSDIRPSGLCLCSVTIKA 1661
            DPNA+ G EWQT DIRPSGLCLC VTIKA
Sbjct: 357  DPNASLGSEWQTCDIRPSGLCLCCVTIKA 385


>ref|XP_002272745.1| PREDICTED: F-box/kelch-repeat protein At1g67480 [Vitis vinifera]
            gi|297738424|emb|CBI27625.3| unnamed protein product
            [Vitis vinifera]
          Length = 385

 Score =  633 bits (1632), Expect = e-179
 Identities = 304/389 (78%), Positives = 337/389 (86%)
 Frame = +3

Query: 495  MPGFVAGKKRFTETNMCFSDLANRDKSTPSKGNHCVRSEALXXXXXXXXSSILPGLPDDV 674
            MPG VAGKKRFT++NMC S+   +D  T SK N C+ S+            ILPGLPDDV
Sbjct: 1    MPGIVAGKKRFTQSNMCLSNSVQQDTLTLSKSNPCLTSQ----FADDSYGPILPGLPDDV 56

Query: 675  SKYCLALVPRSNFPAMGGVCKRWRRFIQSKELITVRKLAGKLEEWLYILTADSEGKGSHW 854
            +KYCLALVPRSNFPAMGGV K+WR FI+SKE ITVRKLAG LEEWLY+LT D+EGKGSHW
Sbjct: 57   AKYCLALVPRSNFPAMGGVSKKWRSFIRSKEFITVRKLAGMLEEWLYVLTMDAEGKGSHW 116

Query: 855  EVMDSLGHNRRSLPPMPGPGKAEFGVVVLNGKLLVMAGYSSIDGTACASAEVYQYNSCLN 1034
            EV+D LGH  + LPPMPGP K  F VVVLNGKLLVMAG S +  T  ASA+VYQY+SCLN
Sbjct: 117  EVLDCLGHKHQLLPPMPGPVKTGFEVVVLNGKLLVMAGCSVVGRTGSASADVYQYDSCLN 176

Query: 1035 SWSGLSNMNVARYDFACAEVNGLVYAVGGHGANGDSLSSAEVYDPDTDKWTLIESLRRPR 1214
            SWS L+NMNVARYDFACAEVNG+VYAVGG+GA+GDSLSSAE+YD D DKW LIESLRRPR
Sbjct: 177  SWSKLANMNVARYDFACAEVNGMVYAVGGYGADGDSLSSAEMYDADADKWILIESLRRPR 236

Query: 1215 WGCFACGFEGKLYVMGGRSSFTIGNSKFVDVYNPEKHKWCEMKNGCVMVTAHAVLGKKLF 1394
            +GCFACGFEGKLYVMGGRSSFTIGNS+FVDVYNPE+H WCEMKNG VMVTAHAVLGKKLF
Sbjct: 237  YGCFACGFEGKLYVMGGRSSFTIGNSRFVDVYNPERHTWCEMKNGRVMVTAHAVLGKKLF 296

Query: 1395 CMEWKNQRKLAIFSPEDNSWEMVPVPLTGSSSIGFRFGILNGKLLLFSVKEEPTYKTLLY 1574
            CMEWKNQRKLAIF+PEDNSW+MVPVPLTGSSSIGFRFGIL GKLLLFS++E+P Y+TLLY
Sbjct: 297  CMEWKNQRKLAIFNPEDNSWKMVPVPLTGSSSIGFRFGILEGKLLLFSLEEDPGYRTLLY 356

Query: 1575 DPNAAPGCEWQTSDIRPSGLCLCSVTIKA 1661
            DP+AAPG EWQTS+I+PSG CLCSVTIKA
Sbjct: 357  DPDAAPGSEWQTSEIKPSGSCLCSVTIKA 385


>ref|XP_003601804.1| F-box family protein [Medicago truncatula]
            gi|355490852|gb|AES72055.1| F-box family protein
            [Medicago truncatula]
          Length = 372

 Score =  625 bits (1613), Expect = e-177
 Identities = 302/376 (80%), Positives = 330/376 (87%), Gaps = 2/376 (0%)
 Frame = +3

Query: 540  MCFSDLANRDKSTP--SKGNHCVRSEALXXXXXXXXSSILPGLPDDVSKYCLALVPRSNF 713
            MCF++L N+DK+T   SK NHC+  EAL        S ILPGLPDDV+KYCLALVPRSNF
Sbjct: 1    MCFTNLVNQDKTTHTRSKSNHCLTIEALDKDD----SPILPGLPDDVAKYCLALVPRSNF 56

Query: 714  PAMGGVCKRWRRFIQSKELITVRKLAGKLEEWLYILTADSEGKGSHWEVMDSLGHNRRSL 893
            PAMGGV K+WR FI+SKE + VRKLAG LEEWLY LT DSEG+ SHWEVMDSLG   RSL
Sbjct: 57   PAMGGVSKKWRLFIRSKEFVMVRKLAGLLEEWLYCLTLDSEGRESHWEVMDSLGRKCRSL 116

Query: 894  PPMPGPGKAEFGVVVLNGKLLVMAGYSSIDGTACASAEVYQYNSCLNSWSGLSNMNVARY 1073
            PPMPGP KA FGVVVLNGKLL+MAGYS+I+GT  AS EVYQY+S LNSWS LSNMNVARY
Sbjct: 117  PPMPGPAKASFGVVVLNGKLLIMAGYSAIEGTVVASDEVYQYDSYLNSWSRLSNMNVARY 176

Query: 1074 DFACAEVNGLVYAVGGHGANGDSLSSAEVYDPDTDKWTLIESLRRPRWGCFACGFEGKLY 1253
            DFACAEV+GLVY VGG+G NGD+LSS E+YDPDTDKWTLIESLRRPRWGCFACGFE KLY
Sbjct: 177  DFACAEVDGLVYIVGGYGVNGDNLSSVEMYDPDTDKWTLIESLRRPRWGCFACGFEDKLY 236

Query: 1254 VMGGRSSFTIGNSKFVDVYNPEKHKWCEMKNGCVMVTAHAVLGKKLFCMEWKNQRKLAIF 1433
            VMGGRSSFTIGNSKFVD+YNPEKH WCE+KNGCVMVTAHAVL KKLFC+EWKNQRKLAIF
Sbjct: 237  VMGGRSSFTIGNSKFVDIYNPEKHSWCEIKNGCVMVTAHAVLEKKLFCIEWKNQRKLAIF 296

Query: 1434 SPEDNSWEMVPVPLTGSSSIGFRFGILNGKLLLFSVKEEPTYKTLLYDPNAAPGCEWQTS 1613
            SPE+NSW MVPVPLTGSSS+GFRFGIL+GKLLLF V++EPT +TL YDPNAA G EWQTS
Sbjct: 297  SPENNSWTMVPVPLTGSSSVGFRFGILDGKLLLFPVEKEPTNQTLSYDPNAASGSEWQTS 356

Query: 1614 DIRPSGLCLCSVTIKA 1661
            DIRPSGLCLCSVT+KA
Sbjct: 357  DIRPSGLCLCSVTMKA 372


>ref|XP_002327284.1| predicted protein [Populus trichocarpa] gi|222835654|gb|EEE74089.1|
            predicted protein [Populus trichocarpa]
          Length = 381

 Score =  613 bits (1581), Expect = e-173
 Identities = 300/390 (76%), Positives = 329/390 (84%), Gaps = 1/390 (0%)
 Frame = +3

Query: 495  MPGFVAGKKRFTETNMCFSDLANRD-KSTPSKGNHCVRSEALXXXXXXXXSSILPGLPDD 671
            M G V+GKKRFTE NM FS L  +D KS P   +                S ILPGLPDD
Sbjct: 1    MLGIVSGKKRFTEANMTFSTLITQDFKSKPRLASQIPND---------IDSPILPGLPDD 51

Query: 672  VSKYCLALVPRSNFPAMGGVCKRWRRFIQSKELITVRKLAGKLEEWLYILTADSEGKGSH 851
            V+KYCLALVPRS+FP MG VCK+WR F++SKELIT+RKLAG LEEWLY+LT DSE K SH
Sbjct: 52   VAKYCLALVPRSHFPTMGSVCKKWRSFLKSKELITIRKLAGLLEEWLYVLTMDSEAKESH 111

Query: 852  WEVMDSLGHNRRSLPPMPGPGKAEFGVVVLNGKLLVMAGYSSIDGTACASAEVYQYNSCL 1031
            WEV D LGH  + LPPMPGP KAEFGVVVLNGKLLVMAGYS IDGT  ASA+VY+Y+SCL
Sbjct: 112  WEVFDCLGHKHQLLPPMPGPVKAEFGVVVLNGKLLVMAGYSVIDGTGSASADVYEYDSCL 171

Query: 1032 NSWSGLSNMNVARYDFACAEVNGLVYAVGGHGANGDSLSSAEVYDPDTDKWTLIESLRRP 1211
            NSW  L++MNVARY+FACAEVNG VY VGG+G +GDSLSS E+Y+PDTDKWTLIESLRRP
Sbjct: 172  NSWRKLASMNVARYEFACAEVNGKVYVVGGNGMDGDSLSSVEMYNPDTDKWTLIESLRRP 231

Query: 1212 RWGCFACGFEGKLYVMGGRSSFTIGNSKFVDVYNPEKHKWCEMKNGCVMVTAHAVLGKKL 1391
            R GCFAC FEGKLYVMGGRSSFTIGNSKFVDVYNPE H WCEMKNG VMVTAHAVLGKKL
Sbjct: 232  RRGCFACSFEGKLYVMGGRSSFTIGNSKFVDVYNPEGHTWCEMKNGRVMVTAHAVLGKKL 291

Query: 1392 FCMEWKNQRKLAIFSPEDNSWEMVPVPLTGSSSIGFRFGILNGKLLLFSVKEEPTYKTLL 1571
            FCMEWKNQRKLAIFSPEDNSW+MVPVPLTGSSSIGFRFGIL+GKLLLFS + EP Y+TLL
Sbjct: 292  FCMEWKNQRKLAIFSPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSQEMEPGYRTLL 351

Query: 1572 YDPNAAPGCEWQTSDIRPSGLCLCSVTIKA 1661
            YDP+A+PG EWQTS+I+PSG CLCSVTIKA
Sbjct: 352  YDPDASPGSEWQTSEIKPSGWCLCSVTIKA 381


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