BLASTX nr result

ID: Glycyrrhiza24_contig00005601 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005601
         (1034 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526877.1| PREDICTED: psbP domain-containing protein 2,...   280   5e-73
ref|XP_003523215.1| PREDICTED: psbP domain-containing protein 2,...   275   1e-71
ref|XP_003602661.1| PsbP domain-containing protein [Medicago tru...   270   4e-70
ref|XP_004147342.1| PREDICTED: psbP domain-containing protein 2,...   259   1e-66
ref|XP_002534226.1| conserved hypothetical protein [Ricinus comm...   257   4e-66

>ref|XP_003526877.1| PREDICTED: psbP domain-containing protein 2, chloroplastic-like
           [Glycine max]
          Length = 251

 Score =  280 bits (715), Expect = 5e-73
 Identities = 159/233 (68%), Positives = 171/233 (73%)
 Frame = +3

Query: 201 VSILFPKXXXXXXXXXXXXXCIIHEPSHKDMQLLSPCFSKRKXXXXXXXXXXXWGVLPPI 380
           VSIL PK             CI    S+KDM L +  FSKR            WG    +
Sbjct: 32  VSILLPKCTSPT--------CIYE--SNKDMHL-ALSFSKRNLNLSILLTTFLWGE-GVL 79

Query: 381 LPXXXXXXXXXXXXXXXRYTDSKEGFTLLTPSSWTKVDKPGATVLFQEENILGSNNIGVV 560
           +P               RYTDS+EGFTLLTPSSWTKVDK GATVLFQE + +GSNNIGVV
Sbjct: 80  MPNARDALLLAQELELQRYTDSEEGFTLLTPSSWTKVDKAGATVLFQEAD-MGSNNIGVV 138

Query: 561 VNPVRLATLGEFGTPQFVADKLLQAERRKESTNEAEVITVGERSGKGGLQIYEFEYRLDS 740
           VNPVRL TL EFGTPQFVADKLLQAERRKEST EAE+ITV ERSG+GGLQIYEFEY++DS
Sbjct: 139 VNPVRLKTLEEFGTPQFVADKLLQAERRKESTKEAELITVAERSGEGGLQIYEFEYKVDS 198

Query: 741 TRGGMKRIFSAAFVASKKLYLLNIAHSDKPESPLDPQKRMILEQVLHSFDAAS 899
           TRGGMKRIFSAAFVASKKLYLLNI HSDKPESPLDP KRMILEQVLHSFDAA+
Sbjct: 199 TRGGMKRIFSAAFVASKKLYLLNIVHSDKPESPLDPHKRMILEQVLHSFDAAA 251


>ref|XP_003523215.1| PREDICTED: psbP domain-containing protein 2, chloroplastic-like
           [Glycine max]
          Length = 241

 Score =  275 bits (704), Expect = 1e-71
 Identities = 159/233 (68%), Positives = 170/233 (72%)
 Frame = +3

Query: 201 VSILFPKXXXXXXXXXXXXXCIIHEPSHKDMQLLSPCFSKRKXXXXXXXXXXXWGVLPPI 380
           VSILFP+               IHE SHKD+ L +P FSKR            WG    +
Sbjct: 26  VSILFPRSTSPTC---------IHE-SHKDIHL-APSFSKRSILLTTFL----WGQ-GML 69

Query: 381 LPXXXXXXXXXXXXXXXRYTDSKEGFTLLTPSSWTKVDKPGATVLFQEENILGSNNIGVV 560
           LP               RYTDS EGFTLLTPSSWTKVDK GATVLFQE + +GSNNIGVV
Sbjct: 70  LPNARDALLLAQELELQRYTDSDEGFTLLTPSSWTKVDKAGATVLFQEAD-MGSNNIGVV 128

Query: 561 VNPVRLATLGEFGTPQFVADKLLQAERRKESTNEAEVITVGERSGKGGLQIYEFEYRLDS 740
           VNPVRL TL EFGTPQFVADKLLQAERRKEST E E+ITV ERSG+GGLQIYEFEY++DS
Sbjct: 129 VNPVRLKTLEEFGTPQFVADKLLQAERRKESTKEVELITVAERSGEGGLQIYEFEYKVDS 188

Query: 741 TRGGMKRIFSAAFVASKKLYLLNIAHSDKPESPLDPQKRMILEQVLHSFDAAS 899
           TRGGMKRIFSAAFVASKKLYLLNI HSDK E PLDP KRMILEQVLHSFDAA+
Sbjct: 189 TRGGMKRIFSAAFVASKKLYLLNIVHSDKLEIPLDPNKRMILEQVLHSFDAAA 241


>ref|XP_003602661.1| PsbP domain-containing protein [Medicago truncatula]
           gi|358348394|ref|XP_003638232.1| PsbP domain-containing
           protein [Medicago truncatula]
           gi|355491709|gb|AES72912.1| PsbP domain-containing
           protein [Medicago truncatula]
           gi|355504167|gb|AES85370.1| PsbP domain-containing
           protein [Medicago truncatula]
          Length = 237

 Score =  270 bits (690), Expect = 4e-70
 Identities = 158/265 (59%), Positives = 171/265 (64%)
 Frame = +3

Query: 105 MALKSFSTLSQTISTLXXXXXXXXXXXXXXXXVSILFPKXXXXXXXXXXXXXCIIHEPSH 284
           MALKSFSTLS   +TL                   L PK               IH+ SH
Sbjct: 1   MALKSFSTLSH--NTLFHKLIHASSSSPT------LIPKSTSPSC---------IHD-SH 42

Query: 285 KDMQLLSPCFSKRKXXXXXXXXXXXWGVLPPILPXXXXXXXXXXXXXXXRYTDSKEGFTL 464
           K M    PCF KRK           W V P +L                RYTDS EGFTL
Sbjct: 43  KQM----PCFGKRKLNLTLLLTPFLWSVFPNVL-----LSAQELITELQRYTDSNEGFTL 93

Query: 465 LTPSSWTKVDKPGATVLFQEENILGSNNIGVVVNPVRLATLGEFGTPQFVADKLLQAERR 644
             PSSWTKVDK GAT LFQ+ N  GSNNIGVVVNPVRL  LG+FGTPQFV DKLLQAERR
Sbjct: 94  QIPSSWTKVDKAGATALFQDPN-KGSNNIGVVVNPVRLTALGDFGTPQFVVDKLLQAERR 152

Query: 645 KESTNEAEVITVGERSGKGGLQIYEFEYRLDSTRGGMKRIFSAAFVASKKLYLLNIAHSD 824
           KEST EAEV+TV ERSGKGGLQ+YEFEY++DSTRGG+KRIFSAAFVASKK+Y LNI HSD
Sbjct: 153 KESTKEAEVVTVAERSGKGGLQVYEFEYKIDSTRGGLKRIFSAAFVASKKIYFLNIVHSD 212

Query: 825 KPESPLDPQKRMILEQVLHSFDAAS 899
            PESPLD  KRM+LEQVLHSFD+ S
Sbjct: 213 NPESPLDQHKRMMLEQVLHSFDSTS 237


>ref|XP_004147342.1| PREDICTED: psbP domain-containing protein 2, chloroplastic-like
           [Cucumis sativus] gi|449523543|ref|XP_004168783.1|
           PREDICTED: psbP domain-containing protein 2,
           chloroplastic-like [Cucumis sativus]
          Length = 357

 Score =  259 bits (661), Expect = 1e-66
 Identities = 129/155 (83%), Positives = 142/155 (91%)
 Frame = +3

Query: 432 RYTDSKEGFTLLTPSSWTKVDKPGATVLFQEENILGSNNIGVVVNPVRLATLGEFGTPQF 611
           RYTDSKEGFTLL PSSW KVDK GATVLF+E N  GSNN+GVVVNPVRL +LGEFGTPQF
Sbjct: 201 RYTDSKEGFTLLRPSSWVKVDKAGATVLFEEGN-KGSNNVGVVVNPVRLTSLGEFGTPQF 259

Query: 612 VADKLLQAERRKESTNEAEVITVGERSGKGGLQIYEFEYRLDSTRGGMKRIFSAAFVASK 791
           VADKL+QAE+RKEST +A V+ V ERSG+GGLQ+YEFEY +DSTRGGMKRIFSAAFVASK
Sbjct: 260 VADKLIQAEKRKESTKDAAVVGVAERSGEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASK 319

Query: 792 KLYLLNIAHSDKPESPLDPQKRMILEQVLHSFDAA 896
           KLY+LNI+HSDKPESPLD QKRM+LEQVLHSFDAA
Sbjct: 320 KLYILNISHSDKPESPLDSQKRMMLEQVLHSFDAA 354


>ref|XP_002534226.1| conserved hypothetical protein [Ricinus communis]
           gi|223525676|gb|EEF28158.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 244

 Score =  257 bits (656), Expect = 4e-66
 Identities = 135/205 (65%), Positives = 155/205 (75%)
 Frame = +3

Query: 276 PSHKDMQLLSPCFSKRKXXXXXXXXXXXWGVLPPILPXXXXXXXXXXXXXXXRYTDSKEG 455
           P+ K+  +LS C+SKRK             ++P  +                RYTD+KEG
Sbjct: 43  PNRKEAVILSFCWSKRKLILALSINGSLLNIIPDTI-------LAIEMGELERYTDAKEG 95

Query: 456 FTLLTPSSWTKVDKPGATVLFQEENILGSNNIGVVVNPVRLATLGEFGTPQFVADKLLQA 635
           FTLL PS++ KVDK GATVLF+E N  GSNNIGVVVNPVRLATLGEFGTPQFVADKL+QA
Sbjct: 96  FTLLRPSTYVKVDKAGATVLFEEVN-KGSNNIGVVVNPVRLATLGEFGTPQFVADKLIQA 154

Query: 636 ERRKESTNEAEVITVGERSGKGGLQIYEFEYRLDSTRGGMKRIFSAAFVASKKLYLLNIA 815
           E+RKEST + E+I V ER G GGLQ+YEFEYR+DSTRGG+KRIFSAAFVASKKLYLLNI 
Sbjct: 155 EKRKESTKDVELIGVAERPGHGGLQVYEFEYRVDSTRGGVKRIFSAAFVASKKLYLLNIT 214

Query: 816 HSDKPESPLDPQKRMILEQVLHSFD 890
           HSDKPESPLDP  RM+LE+VLHSFD
Sbjct: 215 HSDKPESPLDPHTRMMLEEVLHSFD 239


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