BLASTX nr result

ID: Glycyrrhiza24_contig00005590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005590
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522077.1| PREDICTED: serine/threonine-protein kinase S...   173   2e-41
ref|XP_003548329.1| PREDICTED: serine/threonine-protein kinase S...   168   6e-40
ref|XP_002273138.1| PREDICTED: serine/threonine-protein kinase S...   166   2e-39
ref|XP_002308258.1| predicted protein [Populus trichocarpa] gi|2...   165   5e-39
gb|AFK41096.1| unknown [Medicago truncatula]                          161   8e-38

>ref|XP_003522077.1| PREDICTED: serine/threonine-protein kinase STN8, chloroplastic-like
           [Glycine max]
          Length = 497

 Score =  173 bits (439), Expect = 2e-41
 Identities = 106/172 (61%), Positives = 119/172 (69%), Gaps = 6/172 (3%)
 Frame = -1

Query: 504 MASLLNPXXXXXXTLKRNQISICFSPLKAKSAIPNHVVSFSA--RTNRFKCNAFLE---- 343
           MASLL P      TLK N   +   P     A  N  +S S   R N  KC+A  +    
Sbjct: 1   MASLLLPPTATSSTLKHNNQILKLKPNNNAHATCNVFLSNSNHYRFNSAKCHALFDDVAK 60

Query: 342 GLLEKSSEISLQSGMLLQQQFERVSEELSDMQRLGFVVFGGLTWVYLTARPGVLIGAIDA 163
           GLLE SS        +   QF+RV+E LSDMQR  F+VFGGLTW+YLTARPGVL+GAIDA
Sbjct: 61  GLLESSS--------VGVDQFQRVTEGLSDMQRWVFLVFGGLTWIYLTARPGVLVGAIDA 112

Query: 162 YLLAPLQLGLDNLFGRRKNLKRSDFLVGDKLGEGSFGVVYSGVLVPKNVNVD 7
           YLLAPLQLGLDNL GRR NLKRSDF+VGDKLGEGSFGVVYSGVL+PKNV+VD
Sbjct: 113 YLLAPLQLGLDNLSGRR-NLKRSDFVVGDKLGEGSFGVVYSGVLLPKNVDVD 163


>ref|XP_003548329.1| PREDICTED: serine/threonine-protein kinase STN8, chloroplastic-like
           [Glycine max]
          Length = 503

 Score =  168 bits (426), Expect = 6e-40
 Identities = 103/177 (58%), Positives = 124/177 (70%), Gaps = 11/177 (6%)
 Frame = -1

Query: 504 MASLLNPXXXXXXT--LKRNQISICFSP-LKAKSAIPNHVVSFSARTN-RF---KCNAFL 346
           MASLL P      +  +K N+I     P   A +A  N  +S ++  N RF   KC+A L
Sbjct: 1   MASLLLPPTPTATSSTVKHNKIQTKLKPNSNAHAATCNFFLSSNSNANHRFNSAKCHALL 60

Query: 345 E----GLLEKSSEISLQSGMLLQQQFERVSEELSDMQRLGFVVFGGLTWVYLTARPGVLI 178
           +    GLLE SS + +        QF+R++E LS MQR   +VFGGLTW+YLTARPGVL+
Sbjct: 61  DDVAKGLLESSSSVGVD-------QFQRLTEGLSHMQRWEILVFGGLTWIYLTARPGVLV 113

Query: 177 GAIDAYLLAPLQLGLDNLFGRRKNLKRSDFLVGDKLGEGSFGVVYSGVLVPKNVNVD 7
           GAIDAYLLAPLQLGLDNL GRR NLKRSDF+VGDKLGEGSFGVVYSG+LVPKNV++D
Sbjct: 114 GAIDAYLLAPLQLGLDNLSGRR-NLKRSDFVVGDKLGEGSFGVVYSGILVPKNVDLD 169


>ref|XP_002273138.1| PREDICTED: serine/threonine-protein kinase STN8, chloroplastic
           [Vitis vinifera]
          Length = 501

 Score =  166 bits (421), Expect = 2e-39
 Identities = 99/175 (56%), Positives = 126/175 (72%), Gaps = 7/175 (4%)
 Frame = -1

Query: 504 MASLLNPXXXXXXTLKRNQISICFSPLKAKSAIPNHVVSFSAR--TNRFKCNAFLEGLLE 331
           MASLL+P        ++    I FS  K  S I  H+ SFS R  TN  +CNAF + + E
Sbjct: 1   MASLLSPAATT---FQQQPKRIWFSFSKPISQI--HLSSFSNRFKTNPARCNAFFDNISE 55

Query: 330 KSSEI--SLQSGMLLQQ---QFERVSEELSDMQRLGFVVFGGLTWVYLTARPGVLIGAID 166
              E+  SL S    +    QF+R++EEL +M++ G +VF GLTW+YLTARPGVL+GAID
Sbjct: 56  NVVELDQSLSSFPFYRSGYAQFQRITEELPEMEKWGILVFAGLTWIYLTARPGVLMGAID 115

Query: 165 AYLLAPLQLGLDNLFGRRKNLKRSDFLVGDKLGEGSFGVVYSGVLVPKNVNVDDR 1
           +YLLAPLQLGLD+L GRR NLKR+DF+VG++LGEGSFGVVYSGVLVPKNV+V++R
Sbjct: 116 SYLLAPLQLGLDSLTGRR-NLKRTDFVVGNRLGEGSFGVVYSGVLVPKNVSVEER 169


>ref|XP_002308258.1| predicted protein [Populus trichocarpa] gi|222854234|gb|EEE91781.1|
           predicted protein [Populus trichocarpa]
          Length = 501

 Score =  165 bits (418), Expect = 5e-39
 Identities = 95/176 (53%), Positives = 122/176 (69%), Gaps = 8/176 (4%)
 Frame = -1

Query: 504 MASLLNPXXXXXXTLKRNQISICFSPLKAKSAIPNHVVSFSARTNRFKCNAFL----EGL 337
           MASL++P       L++N   ICFS  K          +   R+N  +C AF     + L
Sbjct: 1   MASLISPMTPA---LQQNPKIICFSAFKPPLHHDTPSFTDRLRSNPGRCKAFFGNIPDDL 57

Query: 336 LEKSSEI----SLQSGMLLQQQFERVSEELSDMQRLGFVVFGGLTWVYLTARPGVLIGAI 169
           LE + ++    + QSG++   QF+ V+EELSD Q+ G +VF G+ W+YLTARPG+LIGAI
Sbjct: 58  LENTLQLDQFPAFQSGLV---QFQSVTEELSDTQKWGLLVFAGVAWIYLTARPGILIGAI 114

Query: 168 DAYLLAPLQLGLDNLFGRRKNLKRSDFLVGDKLGEGSFGVVYSGVLVPKNVNVDDR 1
           DAYLLAPLQLGLD+L GRR NLKRSDFLVGDKLGEGSFGVVYSGV+VP+N  V+++
Sbjct: 115 DAYLLAPLQLGLDSLTGRR-NLKRSDFLVGDKLGEGSFGVVYSGVVVPRNATVEEK 169


>gb|AFK41096.1| unknown [Medicago truncatula]
          Length = 500

 Score =  161 bits (408), Expect = 8e-38
 Identities = 103/177 (58%), Positives = 116/177 (65%), Gaps = 14/177 (7%)
 Frame = -1

Query: 504 MASLLNPXXXXXXTLKRNQISICF-SPLKAKSAIPNHVVSFSARTNRF-----KCNAFLE 343
           MASLL+P       LK    +ICF  PLK  +      VSF   TNR      KCNAF +
Sbjct: 1   MASLLHPTPTVTTILKHRTSTICFFCPLKPTN------VSFLTNTNRVNTNTTKCNAFFD 54

Query: 342 -----GLLEKSSE---ISLQSGMLLQQQFERVSEELSDMQRLGFVVFGGLTWVYLTARPG 187
                GLLE   +     L+SG+L   QF+    ELSDMQR  F++FGGL W+YLTARPG
Sbjct: 55  NNVTSGLLEVGGDHIPSFLRSGLL---QFQ----ELSDMQRWEFLLFGGLIWIYLTARPG 107

Query: 186 VLIGAIDAYLLAPLQLGLDNLFGRRKNLKRSDFLVGDKLGEGSFGVVYSGVLVPKNV 16
           VLIGAIDAYL APLQLG DNL GRR NLK  DFLVGDK+GEGSFGVVYSGVL+ KNV
Sbjct: 108 VLIGAIDAYLFAPLQLGFDNLSGRR-NLKTGDFLVGDKIGEGSFGVVYSGVLISKNV 163


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