BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005580
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003619828.1| Pentatricopeptide repeat-containing protein ...   297   2e-78
ref|XP_003544380.1| PREDICTED: pentatricopeptide repeat-containi...   272   4e-71
emb|CBI18867.3| unnamed protein product [Vitis vinifera]              199   6e-49
ref|XP_002284840.1| PREDICTED: pentatricopeptide repeat-containi...   199   6e-49
ref|XP_002889073.1| pentatricopeptide repeat-containing protein ...   189   5e-46

>ref|XP_003619828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355494843|gb|AES76046.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 895

 Score =  297 bits (760), Expect = 2e-78
 Identities = 143/183 (78%), Positives = 166/183 (90%)
 Frame = +3

Query: 3    CPVTCTYTALIKILLEDENFSEALDLLERIRLDGIQLDVLLFNTFLREAFYKGRIDVIEF 182
            CPV CTYTAL+KILLEDENF+EA+D+LERI+LDGI+LDVLLFNTFLR+A Y+GRIDVIEF
Sbjct: 652  CPVACTYTALVKILLEDENFNEAVDVLERIKLDGIKLDVLLFNTFLRQACYRGRIDVIEF 711

Query: 183  VVECMRREKIQPNPATCAFVFSAYVNSGFHNTAIEALQVLSLRMMSEDGNLLAERKNFVD 362
            +VE M +EK+QP+PATC +VFSAYVNS FHNTAIEALQVLSLRMMSEDGN+L ERK+ VD
Sbjct: 712  IVEFMHQEKVQPDPATCGYVFSAYVNSSFHNTAIEALQVLSLRMMSEDGNILKERKDLVD 771

Query: 363  EFILAEDLAAESLILQLFEDSEDELSVGLLNLRWCAILGFPICESAEHSPWAKRIESRLL 542
            EFIL EDLA+ES I +LFEDSEDE++ GLLNLRWCAI+GFP+CESA+ S WAKR+E R  
Sbjct: 772  EFILNEDLASESHIFKLFEDSEDEVATGLLNLRWCAIIGFPLCESADRSLWAKRLELRFQ 831

Query: 543  KRL 551
            KRL
Sbjct: 832  KRL 834


>ref|XP_003544380.1| PREDICTED: pentatricopeptide repeat-containing protein At1g76280-like
            [Glycine max]
          Length = 738

 Score =  272 bits (696), Expect = 4e-71
 Identities = 135/180 (75%), Positives = 158/180 (87%), Gaps = 1/180 (0%)
 Frame = +3

Query: 6    PVTCTYTALIKILLEDENFSEALDLLERIRLDGIQLDVLLFNTFLREAFYKGRIDVIEFV 185
            PV CTY A+I+ILLEDENF+EAL+LL+++ LDGIQ DVLLFNT L+EA YKGRIDVIEF+
Sbjct: 559  PVICTYNAIIEILLEDENFNEALNLLKQVILDGIQPDVLLFNTVLKEACYKGRIDVIEFI 618

Query: 186  VECMRREKIQPNPATCAFVFSAYVNSGFHNTAIEALQVLSLRMMSEDGNLLAERKNFVDE 365
            VECMRREK+ P+  TC +VFSAYV+SGFHNTAIEALQVLSLRMMSEDGN+L E  NFV+E
Sbjct: 619  VECMRREKVPPDTRTCGYVFSAYVDSGFHNTAIEALQVLSLRMMSEDGNILRENTNFVNE 678

Query: 366  FILAEDLA-AESLILQLFEDSEDELSVGLLNLRWCAILGFPICESAEHSPWAKRIESRLL 542
            FIL+ED+A  ES IL+LFEDSEDEL++GLLNLRWCAI GFPIC+SA+ S WAKR+E   L
Sbjct: 679  FILSEDVAVVESQILKLFEDSEDELAIGLLNLRWCAIAGFPICKSADQSLWAKRLEGMQL 738


>emb|CBI18867.3| unnamed protein product [Vitis vinifera]
          Length = 804

 Score =  199 bits (505), Expect = 6e-49
 Identities = 100/174 (57%), Positives = 135/174 (77%)
 Frame = +3

Query: 6    PVTCTYTALIKILLEDENFSEALDLLERIRLDGIQLDVLLFNTFLREAFYKGRIDVIEFV 185
            P T TYTALIKILLE E+F EAL+LL++ RL+ I  DVLL+NT L++A  KGRID+IE V
Sbjct: 620  PWTLTYTALIKILLEREDFDEALNLLDQARLEEIPSDVLLYNTILQKACLKGRIDLIELV 679

Query: 186  VECMRREKIQPNPATCAFVFSAYVNSGFHNTAIEALQVLSLRMMSEDGNLLAERKNFVDE 365
             E M +EKIQP+P+TC +VFS+YV+ GF +TA+E+LQVLS+RM+SED + L E++  +++
Sbjct: 680  AEQMHQEKIQPDPSTCYYVFSSYVDGGFFSTALESLQVLSMRMISEDNSTLEEKRTELED 739

Query: 366  FILAEDLAAESLILQLFEDSEDELSVGLLNLRWCAILGFPICESAEHSPWAKRI 527
            FI +ED  AES ILQ F+ S++ L++ LLNLRWCAI G PI  +   S WA+R+
Sbjct: 740  FIHSEDKDAESQILQFFKGSDENLAIALLNLRWCAISGSPISWTPNESLWARRL 793


>ref|XP_002284840.1| PREDICTED: pentatricopeptide repeat-containing protein At1g76280-like
            [Vitis vinifera]
          Length = 728

 Score =  199 bits (505), Expect = 6e-49
 Identities = 100/174 (57%), Positives = 135/174 (77%)
 Frame = +3

Query: 6    PVTCTYTALIKILLEDENFSEALDLLERIRLDGIQLDVLLFNTFLREAFYKGRIDVIEFV 185
            P T TYTALIKILLE E+F EAL+LL++ RL+ I  DVLL+NT L++A  KGRID+IE V
Sbjct: 544  PWTLTYTALIKILLEREDFDEALNLLDQARLEEIPSDVLLYNTILQKACLKGRIDLIELV 603

Query: 186  VECMRREKIQPNPATCAFVFSAYVNSGFHNTAIEALQVLSLRMMSEDGNLLAERKNFVDE 365
             E M +EKIQP+P+TC +VFS+YV+ GF +TA+E+LQVLS+RM+SED + L E++  +++
Sbjct: 604  AEQMHQEKIQPDPSTCYYVFSSYVDGGFFSTALESLQVLSMRMISEDNSTLEEKRTELED 663

Query: 366  FILAEDLAAESLILQLFEDSEDELSVGLLNLRWCAILGFPICESAEHSPWAKRI 527
            FI +ED  AES ILQ F+ S++ L++ LLNLRWCAI G PI  +   S WA+R+
Sbjct: 664  FIHSEDKDAESQILQFFKGSDENLAIALLNLRWCAISGSPISWTPNESLWARRL 717


>ref|XP_002889073.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297334914|gb|EFH65332.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 800

 Score =  189 bits (480), Expect = 5e-46
 Identities = 97/179 (54%), Positives = 132/179 (73%), Gaps = 2/179 (1%)
 Frame = +3

Query: 6    PVTCTYTALIKILLEDENFSEALDLLERIRLDGIQLDVLLFNTFLREAFYKGRIDVIEFV 185
            P   T+TAL+KILL D NF EAL+LL++  L+ I LDVL +NT LR+AF KG IDVIE++
Sbjct: 620  PKAVTFTALMKILLNDGNFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGMIDVIEYI 679

Query: 186  VECMRREKIQPNPATCAFVFSAYVNSGFHNTAIEALQVLSLRMMS-EDGNLLAERKNFVD 362
            VE M REK+ P+P TC +VF+ YV  G+H TAIEAL VLSLRM++ ED   L E+K  ++
Sbjct: 680  VEQMHREKVNPDPTTCHYVFTCYVEKGYHATAIEALNVLSLRMLNEEDKESLQEKKIELE 739

Query: 363  E-FILAEDLAAESLILQLFEDSEDELSVGLLNLRWCAILGFPICESAEHSPWAKRIESR 536
            E F+++ED  AE+ I++LF +SE+ L+  LLNLRWCA+LG  I  S + SPWA+ + ++
Sbjct: 740  ENFVMSEDPEAETKIIELFRNSEEHLAAALLNLRWCAMLGARIIWSEDQSPWARGLSNK 798