BLASTX nr result

ID: Glycyrrhiza24_contig00005559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005559
         (1778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529221.1| PREDICTED: E3 ubiquitin protein ligase RIE1-...   412   e-112
ref|XP_003530912.1| PREDICTED: E3 ubiquitin protein ligase RIE1-...   365   2e-98
ref|XP_003525228.1| PREDICTED: E3 ubiquitin protein ligase RIE1-...   363   1e-97
ref|XP_003525229.1| PREDICTED: E3 ubiquitin protein ligase RIE1-...   360   5e-97
ref|XP_002312464.1| predicted protein [Populus trichocarpa] gi|2...   360   7e-97

>ref|XP_003529221.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
          Length = 352

 Score =  412 bits (1058), Expect = e-112
 Identities = 213/352 (60%), Positives = 231/352 (65%), Gaps = 2/352 (0%)
 Frame = +2

Query: 395  MTSRNSTAMEAPDPHAPLLRSRNDXXXXXXXXXXXXXXXXXXXXX-VLVXXXXXXXXXXX 571
            M+S+ + +MEAP+ HAPLLR   D                      +LV           
Sbjct: 1    MSSQTAASMEAPESHAPLLRPLTDASRAPVPTLALLLGRAGRRGPSMLVRETAARELEER 60

Query: 572  XXDWGYSKPVVALDMSWNMAFVVVSAAMLACTVDERPNTPIRVWIVGYALQCLVHVVLVW 751
              DWGYSKPVVALDMSWNMAFVVV+A MLACT  ERPNTPIRVWIVGYALQCLVHV+LVW
Sbjct: 61   RADWGYSKPVVALDMSWNMAFVVVTAVMLACTTAERPNTPIRVWIVGYALQCLVHVLLVW 120

Query: 752  LEYXXXXXXXXXXXXQM-EIXXXXXXXXXXXXXXXXXXXRPGFTQRCESINTGVSFLWWM 928
            LEY            +  ++                      FT+RCE +NTGVSFLWW+
Sbjct: 121  LEYRRRSRRDSHHGQRARDVESDAGSGDEDYSDDRDWSSGYSFTKRCELLNTGVSFLWWI 180

Query: 929  VGFYWVVSGGDILLQDAPRLYWLXXXXXXXXXXXXXXCVVXXXXXXXXXXXXXXXXXXXX 1108
            VGFYWVVSGG+ILLQDAPRLYWL              CVV                    
Sbjct: 181  VGFYWVVSGGNILLQDAPRLYWLVVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL 240

Query: 1109 YAVAGQEGASEADLSILPTYRFRILSNEEKSSGGAGSMVPIETSSCYLANERILLPEDAE 1288
            YAVAGQEGASEADLS+LP YRFRILS+E+K SGGAGSMVPIETSS YLANER LLPEDAE
Sbjct: 241  YAVAGQEGASEADLSMLPKYRFRILSDEDKPSGGAGSMVPIETSSAYLANERTLLPEDAE 300

Query: 1289 CCICLCPYEDGVELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNEQV 1444
            CCICLC YEDG ELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNEQV
Sbjct: 301  CCICLCSYEDGAELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNEQV 352


>ref|XP_003530912.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
          Length = 360

 Score =  365 bits (938), Expect = 2e-98
 Identities = 195/352 (55%), Positives = 212/352 (60%), Gaps = 2/352 (0%)
 Frame = +2

Query: 395  MTSRNSTAMEAPDPHAPLLRSRNDXXXXXXXXXXXXXXXXXXXXXVLVXXXXXXXXXXXX 574
            M+S NS    A  PHAPLL  R D                     V+V            
Sbjct: 1    MSSPNS----ARQPHAPLLLPRPDAAARLPVLALLLGRRGHS---VMVRETAARELEERR 53

Query: 575  XDWGYSKPVVALDMSWNMAFVVVSAAMLACTVDERPNTPIRVWIVGYALQCLVHVVLVWL 754
             DW YSKPVVALDM+WNMAFVVVSA MLACTV E PNTPIR WI GYALQCL+HV LVWL
Sbjct: 54   ADWTYSKPVVALDMTWNMAFVVVSAVMLACTVKENPNTPIRWWICGYALQCLLHVALVWL 113

Query: 755  EYXXXXXXXXXXXXQMEIXXXXXXXXXXXXXXXXXXXRP-GFTQRCESINTGVSFLWWMV 931
            EY               +                      GFT+RC S+NT +S LWWMV
Sbjct: 114  EYRRRNDAPGDEDSAANLDYDDVNDSDEDDVGTSGSSSSTGFTKRCASLNTMISLLWWMV 173

Query: 932  GFYWVVSGGDILLQDAPRLYWLXXXXXXXXXXXXXXCVVXXXXXXXXXXXXXXXXXXXXY 1111
            GFYWVVSGGDILLQDAPRLYWL              CVV                    Y
Sbjct: 174  GFYWVVSGGDILLQDAPRLYWLTVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILY 233

Query: 1112 AVAGQEGASEADLSILPTYRFRILSNEEK-SSGGAGSMVPIETSSCYLANERILLPEDAE 1288
            AVAGQEGASE+DLSILP YRF++LSNEE    GG GSM+P+ETS+ Y  NER L PEDAE
Sbjct: 234  AVAGQEGASESDLSILPKYRFQMLSNEETPGEGGGGSMIPMETSNGYSVNERTLSPEDAE 293

Query: 1289 CCICLCPYEDGVELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNEQV 1444
            CCIC+  YEDG ELH LPCNHHFHS+CIVKWLKMNATCPLCKYNILKGNEQ+
Sbjct: 294  CCICISSYEDGAELHVLPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQI 345


>ref|XP_003525228.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform 1 [Glycine
            max]
          Length = 344

 Score =  363 bits (931), Expect = 1e-97
 Identities = 192/351 (54%), Positives = 209/351 (59%), Gaps = 1/351 (0%)
 Frame = +2

Query: 395  MTSRNSTAMEAPDPHAPLLRSRNDXXXXXXXXXXXXXXXXXXXXXVLVXXXXXXXXXXXX 574
            M+S NS     P  HAPLL  R D                      +V            
Sbjct: 1    MSSPNSV----PQSHAPLLLPRPDAAARLPILALLLGRRGHS---AVVRETAARELEERR 53

Query: 575  XDWGYSKPVVALDMSWNMAFVVVSAAMLACTVDERPNTPIRVWIVGYALQCLVHVVLVWL 754
             DW YSKPVVALD++WNMAFV+VSA MLACTV E PNTPIR WI GYALQCLVHV LVWL
Sbjct: 54   ADWTYSKPVVALDITWNMAFVLVSAVMLACTVKENPNTPIRWWICGYALQCLVHVALVWL 113

Query: 755  EYXXXXXXXXXXXXQMEIXXXXXXXXXXXXXXXXXXXRP-GFTQRCESINTGVSFLWWMV 931
            EY               +                      GFT+RC S+NT +S LWWMV
Sbjct: 114  EYRRRNDAPRDEESAASLQYDDVNDSDEDDVGTSGSSSSSGFTKRCASLNTMISLLWWMV 173

Query: 932  GFYWVVSGGDILLQDAPRLYWLXXXXXXXXXXXXXXCVVXXXXXXXXXXXXXXXXXXXXY 1111
            GFYWVVSGGDILLQDAPRLYWL              CVV                    Y
Sbjct: 174  GFYWVVSGGDILLQDAPRLYWLSVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILY 233

Query: 1112 AVAGQEGASEADLSILPTYRFRILSNEEKSSGGAGSMVPIETSSCYLANERILLPEDAEC 1291
            AVAGQEGASE+DLSILP YRF++LSNEE    G GSM+P+ETS+ Y  NER L PEDAEC
Sbjct: 234  AVAGQEGASESDLSILPKYRFQLLSNEETPGEGGGSMIPMETSNGYSVNERTLSPEDAEC 293

Query: 1292 CICLCPYEDGVELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNEQV 1444
            CIC+  YEDG ELH LPCNHHFHS+CIVKWLKMNATCPLCKYNILKGNEQV
Sbjct: 294  CICISSYEDGAELHVLPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 344


>ref|XP_003525229.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform 2 [Glycine
            max]
          Length = 334

 Score =  360 bits (925), Expect = 5e-97
 Identities = 191/350 (54%), Positives = 208/350 (59%)
 Frame = +2

Query: 395  MTSRNSTAMEAPDPHAPLLRSRNDXXXXXXXXXXXXXXXXXXXXXVLVXXXXXXXXXXXX 574
            M+S NS     P  HAPLL  R D                      +V            
Sbjct: 1    MSSPNSV----PQSHAPLLLPRPDAAARLPILALLLGRRGHS---AVVRETAARELEERR 53

Query: 575  XDWGYSKPVVALDMSWNMAFVVVSAAMLACTVDERPNTPIRVWIVGYALQCLVHVVLVWL 754
             DW YSKPVVALD++WNMAFV+VSA MLACTV E PNTPIR WI GYALQCLVHV LVWL
Sbjct: 54   ADWTYSKPVVALDITWNMAFVLVSAVMLACTVKENPNTPIRWWICGYALQCLVHVALVWL 113

Query: 755  EYXXXXXXXXXXXXQMEIXXXXXXXXXXXXXXXXXXXRPGFTQRCESINTGVSFLWWMVG 934
            EY               +                      FT+RC S+NT +S LWWMVG
Sbjct: 114  EYRRRNDAPRDEESAASLQYDDVNDSDEDAR---------FTKRCASLNTMISLLWWMVG 164

Query: 935  FYWVVSGGDILLQDAPRLYWLXXXXXXXXXXXXXXCVVXXXXXXXXXXXXXXXXXXXXYA 1114
            FYWVVSGGDILLQDAPRLYWL              CVV                    YA
Sbjct: 165  FYWVVSGGDILLQDAPRLYWLSVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYA 224

Query: 1115 VAGQEGASEADLSILPTYRFRILSNEEKSSGGAGSMVPIETSSCYLANERILLPEDAECC 1294
            VAGQEGASE+DLSILP YRF++LSNEE    G GSM+P+ETS+ Y  NER L PEDAECC
Sbjct: 225  VAGQEGASESDLSILPKYRFQLLSNEETPGEGGGSMIPMETSNGYSVNERTLSPEDAECC 284

Query: 1295 ICLCPYEDGVELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNEQV 1444
            IC+  YEDG ELH LPCNHHFHS+CIVKWLKMNATCPLCKYNILKGNEQV
Sbjct: 285  ICISSYEDGAELHVLPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 334


>ref|XP_002312464.1| predicted protein [Populus trichocarpa] gi|222852284|gb|EEE89831.1|
            predicted protein [Populus trichocarpa]
          Length = 351

 Score =  360 bits (924), Expect = 7e-97
 Identities = 189/345 (54%), Positives = 206/345 (59%), Gaps = 8/345 (2%)
 Frame = +2

Query: 431  DPHAPLLRSRNDXXXXXXXXXXXXXXXXXXXXX-----VLVXXXXXXXXXXXXXDWGYSK 595
            +PHAPLLR R D                          +LV             DWGYSK
Sbjct: 6    EPHAPLLRPRQDPPTSPTSRQTTLSALLGRATGRRGPSMLVRETAARELDERRADWGYSK 65

Query: 596  PVVALDMSWNMAFVVVSAAMLACTVDERPNTPIRVWIVGYALQCLVHVVLVWLEYXXXXX 775
            PVV+LDM WN AFVVVS  ML  TV ERPNTPIR+WI GYALQCLVHVVLVWLEY     
Sbjct: 66   PVVSLDMMWNAAFVVVSVTMLLVTVKERPNTPIRIWICGYALQCLVHVVLVWLEYRRRNT 125

Query: 776  XXXXXXX---QMEIXXXXXXXXXXXXXXXXXXXRPGFTQRCESINTGVSFLWWMVGFYWV 946
                      Q                      R   T+RCES+NT VSFLWWMVGFYWV
Sbjct: 126  RRERDIESQQQSTEEENVPESDEEDDRASFISPRSSVTKRCESVNTMVSFLWWMVGFYWV 185

Query: 947  VSGGDILLQDAPRLYWLXXXXXXXXXXXXXXCVVXXXXXXXXXXXXXXXXXXXXYAVAGQ 1126
            VSGGD+LLQ+AP LYWL              CVV                    YAVAGQ
Sbjct: 186  VSGGDVLLQNAPHLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 245

Query: 1127 EGASEADLSILPTYRFRILSNEEKSSGGAGSMVPIETSSCYLANERILLPEDAECCICLC 1306
            EGASEADL  LP Y+F+++ NEEK    AG MVP+ETSS +L  ERILLPEDAECCICL 
Sbjct: 246  EGASEADLIQLPKYKFQMIRNEEKPGIEAGKMVPVETSSRFLGTERILLPEDAECCICLS 305

Query: 1307 PYEDGVELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNEQ 1441
            PYEDG ELHALPCNHHFH++CIVKWLKMNATCPLCK+NILKGNEQ
Sbjct: 306  PYEDGAELHALPCNHHFHATCIVKWLKMNATCPLCKFNILKGNEQ 350


Top