BLASTX nr result

ID: Glycyrrhiza24_contig00005555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005555
         (808 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609341.1| 50S ribosomal protein L36 [Medicago truncatu...   170   3e-40
gb|AFK39000.1| unknown [Lotus japonicus]                              157   2e-36
gb|AFK46338.1| unknown [Lotus japonicus]                              156   6e-36
ref|XP_003609340.1| 50S ribosomal protein L36 [Medicago truncatu...   154   2e-35
ref|NP_001238540.1| uncharacterized protein LOC100306418 [Glycin...   139   7e-31

>ref|XP_003609341.1| 50S ribosomal protein L36 [Medicago truncatula]
           gi|355510396|gb|AES91538.1| 50S ribosomal protein L36
           [Medicago truncatula] gi|388510640|gb|AFK43386.1|
           unknown [Medicago truncatula]
          Length = 101

 Score =  170 bits (431), Expect = 3e-40
 Identities = 83/101 (82%), Positives = 91/101 (90%), Gaps = 2/101 (1%)
 Frame = +2

Query: 104 MKVRSSVKKMCEFCRTVKRRGRVYVLCTANPKHKQRQGMSTFANEELSHQASLEI--SCA 277
           MKVRSSVKKMCE+CRT+KR+GRVY++CTANPKHKQRQGMSTFA E  SHQ S+EI  SCA
Sbjct: 1   MKVRSSVKKMCEYCRTIKRKGRVYIMCTANPKHKQRQGMSTFAYEAPSHQLSVEISSSCA 60

Query: 278 KQEIRPTHNLRTGLASIIPQRHSLSMLYGWRVGLASIMSKK 400
            QEI+P H  RTGLASIIPQRHSLSMLYGWRVGLASI+SKK
Sbjct: 61  AQEIKPLHTSRTGLASIIPQRHSLSMLYGWRVGLASILSKK 101


>gb|AFK39000.1| unknown [Lotus japonicus]
          Length = 99

 Score =  157 bits (398), Expect = 2e-36
 Identities = 79/99 (79%), Positives = 86/99 (86%)
 Frame = +2

Query: 104 MKVRSSVKKMCEFCRTVKRRGRVYVLCTANPKHKQRQGMSTFANEELSHQASLEISCAKQ 283
           MKVRSSVKKMCEFC+TVKRRGRVYV+C+ANPKHKQRQGMSTFANE  S+  SLEIS AKQ
Sbjct: 1   MKVRSSVKKMCEFCKTVKRRGRVYVICSANPKHKQRQGMSTFANEGPSNPVSLEISSAKQ 60

Query: 284 EIRPTHNLRTGLASIIPQRHSLSMLYGWRVGLASIMSKK 400
           EIR    LR G ASI PQRHSLSMLYGWRVGL+SI+ +K
Sbjct: 61  EIRLPLTLRPGPASIFPQRHSLSMLYGWRVGLSSILFRK 99


>gb|AFK46338.1| unknown [Lotus japonicus]
          Length = 99

 Score =  156 bits (394), Expect = 6e-36
 Identities = 78/99 (78%), Positives = 86/99 (86%)
 Frame = +2

Query: 104 MKVRSSVKKMCEFCRTVKRRGRVYVLCTANPKHKQRQGMSTFANEELSHQASLEISCAKQ 283
           MKVRSSVKKMCEFC+TVKRRGRVYV+C+ANPKHKQRQGMSTFANE  S+  SLEIS AKQ
Sbjct: 1   MKVRSSVKKMCEFCKTVKRRGRVYVICSANPKHKQRQGMSTFANEGPSNPVSLEISSAKQ 60

Query: 284 EIRPTHNLRTGLASIIPQRHSLSMLYGWRVGLASIMSKK 400
           EIR    LR G ASI P+RHSLSMLYGWRVGL+SI+ +K
Sbjct: 61  EIRLPLTLRPGPASIFPRRHSLSMLYGWRVGLSSILFRK 99


>ref|XP_003609340.1| 50S ribosomal protein L36 [Medicago truncatula]
           gi|355510395|gb|AES91537.1| 50S ribosomal protein L36
           [Medicago truncatula]
          Length = 92

 Score =  154 bits (390), Expect = 2e-35
 Identities = 74/92 (80%), Positives = 82/92 (89%), Gaps = 2/92 (2%)
 Frame = +2

Query: 131 MCEFCRTVKRRGRVYVLCTANPKHKQRQGMSTFANEELSHQASLEI--SCAKQEIRPTHN 304
           MCE+CRT+KR+GRVY++CTANPKHKQRQGMSTFA E  SHQ S+EI  SCA QEI+P H 
Sbjct: 1   MCEYCRTIKRKGRVYIMCTANPKHKQRQGMSTFAYEAPSHQLSVEISSSCAAQEIKPLHT 60

Query: 305 LRTGLASIIPQRHSLSMLYGWRVGLASIMSKK 400
            RTGLASIIPQRHSLSMLYGWRVGLASI+SKK
Sbjct: 61  SRTGLASIIPQRHSLSMLYGWRVGLASILSKK 92


>ref|NP_001238540.1| uncharacterized protein LOC100306418 [Glycine max]
           gi|255628469|gb|ACU14579.1| unknown [Glycine max]
          Length = 99

 Score =  139 bits (350), Expect = 7e-31
 Identities = 69/99 (69%), Positives = 77/99 (77%)
 Frame = +2

Query: 104 MKVRSSVKKMCEFCRTVKRRGRVYVLCTANPKHKQRQGMSTFANEELSHQASLEISCAKQ 283
           MKVRSSVKKMCEFC+ VKRRGR+YV+C+ NPKHKQRQGM+TFA+E  S   S E S  K 
Sbjct: 1   MKVRSSVKKMCEFCQIVKRRGRIYVICSGNPKHKQRQGMATFASEGPSRPVSSETSSWKM 60

Query: 284 EIRPTHNLRTGLASIIPQRHSLSMLYGWRVGLASIMSKK 400
            I+P    R GL S  PQRHSLSMLYGWRVGLASI+S K
Sbjct: 61  GIKPAQIARPGLISNTPQRHSLSMLYGWRVGLASILSMK 99


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