BLASTX nr result

ID: Glycyrrhiza24_contig00005551 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005551
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534178.1| hypothetical protein RCOM_0303160 [Ricinus c...    89   3e-16
ref|XP_002308193.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-16
ref|XP_003530243.1| PREDICTED: uncharacterized protein LOC100789...    85   7e-15
emb|CBI30461.3| unnamed protein product [Vitis vinifera]               79   5e-13
ref|XP_002273340.1| PREDICTED: uncharacterized protein LOC100245...    79   5e-13

>ref|XP_002534178.1| hypothetical protein RCOM_0303160 [Ricinus communis]
           gi|223525738|gb|EEF28202.1| hypothetical protein
           RCOM_0303160 [Ricinus communis]
          Length = 937

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 54/133 (40%), Positives = 77/133 (57%)
 Frame = -2

Query: 400 AELTAQKGMNPSHNXXXXXXXXXXXXXXXFKEGPTIPQFSSRHASARSGPVTPGSSVRWD 221
           AEL ++KG +PS N               FKE   IPQ +S + S +SGPV   +S    
Sbjct: 469 AELDSRKGRHPSPNRRFSFSLGRMTRSFSFKETSGIPQLTSTYVSVKSGPVISKASADLG 528

Query: 220 NSSKEKAATSQNRTKSSPLRRLLDPILKHKASDTHHSAESSLTRKESINSPSFRSIGVNE 41
           NS++EKA+   NR +SSPLRR+LDP+LK K S+  +S+ +  +   S N+ S+++I   E
Sbjct: 529 NSNREKAS-GHNRARSSPLRRILDPLLKSKGSNLQNSSGTDQSSSGSPNAHSYKTIDATE 587

Query: 40  PLQAEKRKGSPIQ 2
            LQ EK + S IQ
Sbjct: 588 SLQNEKHELSSIQ 600


>ref|XP_002308193.1| predicted protein [Populus trichocarpa] gi|222854169|gb|EEE91716.1|
           predicted protein [Populus trichocarpa]
          Length = 979

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 53/127 (41%), Positives = 75/127 (59%)
 Frame = -2

Query: 397 ELTAQKGMNPSHNXXXXXXXXXXXXXXXFKEGPTIPQFSSRHASARSGPVTPGSSVRWDN 218
           E+ A+KG +PS N               FKE  T+PQ SS + S +SGPV        DN
Sbjct: 501 EVMARKGRHPSPNRRFSFSLSRMSRSFSFKESSTVPQLSSTYISTKSGPVISEGFACLDN 560

Query: 217 SSKEKAATSQNRTKSSPLRRLLDPILKHKASDTHHSAESSLTRKESINSPSFRSIGVNEP 38
           S++EKA+   NR +SSPLRR+LDP+LK ++S T  SAE+  + K+S+NS + +     EP
Sbjct: 561 SNREKAS-GHNRARSSPLRRMLDPLLKSRSSRTLLSAEND-SLKDSLNSFNLKRFDATEP 618

Query: 37  LQAEKRK 17
           L+ EK +
Sbjct: 619 LKDEKHE 625


>ref|XP_003530243.1| PREDICTED: uncharacterized protein LOC100789408 [Glycine max]
          Length = 940

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 62/132 (46%), Positives = 74/132 (56%)
 Frame = -2

Query: 397 ELTAQKGMNPSHNXXXXXXXXXXXXXXXFKEGPTIPQFSSRHASARSGPVTPGSSVRWDN 218
           ELT Q   NPS N               FKEG +I + SS + +A+SGPVTP SS   D+
Sbjct: 482 ELTPQ---NPSSNRRLSLSLSRIGRSFSFKEG-SISKLSSSYVAAKSGPVTPESSAYLDS 537

Query: 217 SSKEKAATSQNRTKSSPLRRLLDPILKHKASDTHHSAESSLTRKESINSPSFRSIGVNEP 38
            SK++     NRT SSP  RLLDPILK KAS+   S E S+T K S++S S RSI     
Sbjct: 538 HSKDRVK-GHNRTMSSPFLRLLDPILKRKASNIQFSDEQSVTSKGSMDSISLRSIN---- 592

Query: 37  LQAEKRKGSPIQ 2
           L  EK K S IQ
Sbjct: 593 LPDEKSKESSIQ 604


>emb|CBI30461.3| unnamed protein product [Vitis vinifera]
          Length = 855

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 52/132 (39%), Positives = 70/132 (53%)
 Frame = -2

Query: 397 ELTAQKGMNPSHNXXXXXXXXXXXXXXXFKEGPTIPQFSSRHASARSGPVTPGSSVRWDN 218
           +L   KG NPS N               FKEG  +PQ SS + + RSGP    SS    N
Sbjct: 405 DLETAKGRNPSPNRRFTLGLARMSRSFSFKEGSALPQLSSTYVTVRSGPAKSESSACSVN 464

Query: 217 SSKEKAATSQNRTKSSPLRRLLDPILKHKASDTHHSAESSLTRKESINSPSFRSIGVNEP 38
           SS+EKA  + +R +SSPLRRLLDP+L+ KA++   SAE+     +++     R +   E 
Sbjct: 465 SSREKA-NANSRARSSPLRRLLDPLLRPKAANLLQSAET----VQALEGSLCRPLDFCES 519

Query: 37  LQAEKRKGSPIQ 2
           L  EK + S IQ
Sbjct: 520 LHNEKHEASTIQ 531


>ref|XP_002273340.1| PREDICTED: uncharacterized protein LOC100245981 [Vitis vinifera]
          Length = 897

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 52/132 (39%), Positives = 70/132 (53%)
 Frame = -2

Query: 397 ELTAQKGMNPSHNXXXXXXXXXXXXXXXFKEGPTIPQFSSRHASARSGPVTPGSSVRWDN 218
           +L   KG NPS N               FKEG  +PQ SS + + RSGP    SS    N
Sbjct: 426 DLETAKGRNPSPNRRFTLGLARMSRSFSFKEGSALPQLSSTYVTVRSGPAKSESSACSVN 485

Query: 217 SSKEKAATSQNRTKSSPLRRLLDPILKHKASDTHHSAESSLTRKESINSPSFRSIGVNEP 38
           SS+EKA  + +R +SSPLRRLLDP+L+ KA++   SAE+     +++     R +   E 
Sbjct: 486 SSREKA-NANSRARSSPLRRLLDPLLRPKAANLLQSAET----VQALEGSLCRPLDFCES 540

Query: 37  LQAEKRKGSPIQ 2
           L  EK + S IQ
Sbjct: 541 LHNEKHEASTIQ 552


Top