BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005540
         (1138 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590964.1| RNA-binding protein [Medicago truncatula] gi...   399   e-109
ref|XP_003556455.1| PREDICTED: RNA-binding protein 42-like [Glyc...   397   e-108
ref|XP_003537815.1| PREDICTED: RNA-binding protein 42-like [Glyc...   396   e-108
ref|XP_003536140.1| PREDICTED: RNA-binding protein 42-like [Glyc...   395   e-107
gb|AFK47045.1| unknown [Medicago truncatula]                          385   e-104

>ref|XP_003590964.1| RNA-binding protein [Medicago truncatula]
           gi|355480012|gb|AES61215.1| RNA-binding protein
           [Medicago truncatula]
          Length = 240

 Score =  399 bits (1026), Expect = e-109
 Identities = 200/244 (81%), Positives = 212/244 (86%), Gaps = 1/244 (0%)
 Frame = +1

Query: 112 MTTPXXXXXXXXXXFAYSNAPYFPVPFHLQQPATT-HYAAPYVASSSVQIXXXXXXXXXX 288
           MTTP          F YSNAPYFPVPFHLQQPATT HYAAPYVA+ +VQ+          
Sbjct: 1   MTTPPSSSSSQPQ-FTYSNAPYFPVPFHLQQPATTSHYAAPYVAAPAVQLPPPPIVGPVP 59

Query: 289 XXXXASAYSVPQYQAQQLFERDAQIITPEALENVKAAIASSDVEHKAETKKKAVPRKAAG 468
                +AYSVPQYQAQQLFERDAQIITPEALENVKAAIASSDVEHKAETKKKAVPRKAAG
Sbjct: 60  PP---AAYSVPQYQAQQLFERDAQIITPEALENVKAAIASSDVEHKAETKKKAVPRKAAG 116

Query: 469 QTWEDPILAEWPEDDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYG 648
           Q WEDPILAEWPEDDYRLFCGDLGNEVNDDVLSKAF+RFPSFNMARVVRDKRTGKTKGYG
Sbjct: 117 QAWEDPILAEWPEDDYRLFCGDLGNEVNDDVLSKAFTRFPSFNMARVVRDKRTGKTKGYG 176

Query: 649 FVSFANPADLAAALKEMNGKYVGNRPIKLRKSKWKERTDYETLEKHKNHVQKKPKLTRKG 828
           F+SFANPADLAAALKEMNGKYVGNRPIKLRKSKW+ERTDY+ LEK KNH+QKKPK++RK 
Sbjct: 177 FISFANPADLAAALKEMNGKYVGNRPIKLRKSKWRERTDYDALEKQKNHIQKKPKMSRKS 236

Query: 829 VLHK 840
           +LHK
Sbjct: 237 ILHK 240


>ref|XP_003556455.1| PREDICTED: RNA-binding protein 42-like [Glycine max]
          Length = 247

 Score =  397 bits (1021), Expect = e-108
 Identities = 200/247 (80%), Positives = 208/247 (84%), Gaps = 4/247 (1%)
 Frame = +1

Query: 112 MTTPXXXXXXXXXXFAYSN---APYFPVPFHLQQPATTHYAAPYVASSSVQIXXXXXXXX 282
           MTTP          FAYSN   + YFPVPFHLQQPATTHYAAPYVA+ SVQI        
Sbjct: 1   MTTPPSSSSASHSQFAYSNPSSSSYFPVPFHLQQPATTHYAAPYVAAPSVQIPAPPVVGP 60

Query: 283 XXXXXXASAYS-VPQYQAQQLFERDAQIITPEALENVKAAIASSDVEHKAETKKKAVPRK 459
                    YS VPQYQAQQLFERDAQIITPEALENVKAAIASSDVEHK + KKKAVPRK
Sbjct: 61  IAPAPVPGVYSAVPQYQAQQLFERDAQIITPEALENVKAAIASSDVEHKTDAKKKAVPRK 120

Query: 460 AAGQTWEDPILAEWPEDDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTK 639
           AAGQ WEDPILAEWPEDDYRLFCGDLGNEVNDDVLSKAFSRFPSFN+ARVVRDKRTGKTK
Sbjct: 121 AAGQAWEDPILAEWPEDDYRLFCGDLGNEVNDDVLSKAFSRFPSFNLARVVRDKRTGKTK 180

Query: 640 GYGFVSFANPADLAAALKEMNGKYVGNRPIKLRKSKWKERTDYETLEKHKNHVQKKPKLT 819
           GYGFVSFANP+DLAAALKEMNGKYVGNRPIKLRKSKW+ERTDYE LEK KNH+QKKPK+ 
Sbjct: 181 GYGFVSFANPSDLAAALKEMNGKYVGNRPIKLRKSKWRERTDYEALEKQKNHIQKKPKMP 240

Query: 820 RKGVLHK 840
           RKGVLHK
Sbjct: 241 RKGVLHK 247


>ref|XP_003537815.1| PREDICTED: RNA-binding protein 42-like [Glycine max]
          Length = 246

 Score =  396 bits (1018), Expect = e-108
 Identities = 198/231 (85%), Positives = 205/231 (88%), Gaps = 2/231 (0%)
 Frame = +1

Query: 154 FAYSN-APYFPVPFHLQQPATTHYAAPYVASSSVQIXXXXXXXXXXXXXXASAYS-VPQY 327
           F YSN + YFPVPFHLQQPATTHYAAPYVA+ SVQI              A  YS VPQY
Sbjct: 16  FTYSNPSSYFPVPFHLQQPATTHYAAPYVAAPSVQIPAPPIVGPVVPAPVAGVYSTVPQY 75

Query: 328 QAQQLFERDAQIITPEALENVKAAIASSDVEHKAETKKKAVPRKAAGQTWEDPILAEWPE 507
           QAQQLFERDAQIITPEALENVKAAIASSDVEHKA+ KKKAVPRKAAGQ+WEDPILAEWPE
Sbjct: 76  QAQQLFERDAQIITPEALENVKAAIASSDVEHKADAKKKAVPRKAAGQSWEDPILAEWPE 135

Query: 508 DDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFANPADLAAA 687
           DDYRLFCGDLGNEVNDDVLSK FSRFPSFN+ARVVRDKRTGKTKGYGFVSFANPADLAAA
Sbjct: 136 DDYRLFCGDLGNEVNDDVLSKVFSRFPSFNLARVVRDKRTGKTKGYGFVSFANPADLAAA 195

Query: 688 LKEMNGKYVGNRPIKLRKSKWKERTDYETLEKHKNHVQKKPKLTRKGVLHK 840
           +KEMNGKYVGNRPIKLRKSKWKERTDYE LEK KNH+QKKPKL RKGVLHK
Sbjct: 196 VKEMNGKYVGNRPIKLRKSKWKERTDYEALEKQKNHIQKKPKLPRKGVLHK 246


>ref|XP_003536140.1| PREDICTED: RNA-binding protein 42-like [Glycine max]
          Length = 248

 Score =  395 bits (1015), Expect = e-107
 Identities = 199/248 (80%), Positives = 206/248 (83%), Gaps = 5/248 (2%)
 Frame = +1

Query: 112 MTTPXXXXXXXXXXFAYSN----APYFPVPFHLQQPATTHYAAPYVASSSVQIXXXXXXX 279
           MTTP          FAYSN    + YFPVPFHLQQPATTHYAAPYVA+ SVQI       
Sbjct: 1   MTTPPSSSSASQSQFAYSNPSSSSSYFPVPFHLQQPATTHYAAPYVAAPSVQIPAPPVVG 60

Query: 280 XXXXXXXASAYS-VPQYQAQQLFERDAQIITPEALENVKAAIASSDVEHKAETKKKAVPR 456
                     YS VPQYQAQQLFERDAQIITPEALENVKAAIASSDVEHK + KKKAVPR
Sbjct: 61  PVAPAPVPGVYSAVPQYQAQQLFERDAQIITPEALENVKAAIASSDVEHKTDAKKKAVPR 120

Query: 457 KAAGQTWEDPILAEWPEDDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKT 636
           KAAG  WEDPILAEWPEDDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKT
Sbjct: 121 KAAGHAWEDPILAEWPEDDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKT 180

Query: 637 KGYGFVSFANPADLAAALKEMNGKYVGNRPIKLRKSKWKERTDYETLEKHKNHVQKKPKL 816
           KGYGFVSFANP+DLA ALKEMNGKYVGNRPIKLRKSKW+ERTDYE LEK KNH+QKKPK+
Sbjct: 181 KGYGFVSFANPSDLAGALKEMNGKYVGNRPIKLRKSKWRERTDYEALEKQKNHIQKKPKM 240

Query: 817 TRKGVLHK 840
            RKGVLHK
Sbjct: 241 ARKGVLHK 248


>gb|AFK47045.1| unknown [Medicago truncatula]
          Length = 247

 Score =  385 bits (988), Expect = e-104
 Identities = 197/251 (78%), Positives = 207/251 (82%), Gaps = 1/251 (0%)
 Frame = +1

Query: 112 MTTPXXXXXXXXXXFAYSNAPYFPVPFHLQQPATTH-YAAPYVASSSVQIXXXXXXXXXX 288
           MTTP          F YSNAPYFPVPFHLQQPATT  YAAPYVA+ +VQ+          
Sbjct: 1   MTTPPSSSSSQPQ-FTYSNAPYFPVPFHLQQPATTSPYAAPYVAAPAVQLPPPPIVGPVP 59

Query: 289 XXXXASAYSVPQYQAQQLFERDAQIITPEALENVKAAIASSDVEHKAETKKKAVPRKAAG 468
                +AYSVPQYQAQQLFERDAQIITPEALENVKAAIASSDVEHKAETKKKAVPRKAAG
Sbjct: 60  PP---AAYSVPQYQAQQLFERDAQIITPEALENVKAAIASSDVEHKAETKKKAVPRKAAG 116

Query: 469 QTWEDPILAEWPEDDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYG 648
           Q WEDPILAEWPEDDYRLFCGDLGNEVNDDVLSKAF+RFPSFNMARVVRDKRTGKTKGYG
Sbjct: 117 QAWEDPILAEWPEDDYRLFCGDLGNEVNDDVLSKAFTRFPSFNMARVVRDKRTGKTKGYG 176

Query: 649 FVSFANPADLAAALKEMNGKYVGNRPIKLRKSKWKERTDYETLEKHKNHVQKKPKLTRKG 828
           F+SFANPADLAAA KEMNGKYVGNRPIKLRKSKW+ERTDY+ LEK KNH+QKKPK   + 
Sbjct: 177 FISFANPADLAAAFKEMNGKYVGNRPIKLRKSKWRERTDYDALEKQKNHIQKKPKCQERV 236

Query: 829 VLHK*NMPESV 861
                N PE V
Sbjct: 237 FCTSENRPEYV 247