BLASTX nr result

ID: Glycyrrhiza24_contig00005507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005507
         (762 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sa...   200   3e-49
ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycin...   192   5e-47
ref|NP_001236758.1| uncharacterized protein LOC100499841 [Glycin...   191   1e-46
ref|XP_003601657.1| Glycine-rich RNA-binding protein [Medicago t...   188   1e-45
gb|AFK48773.1| unknown [Lotus japonicus]                              187   2e-45

>gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
           gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding
           protein [Pisum sativum]
          Length = 146

 Score =  200 bits (508), Expect = 3e-49
 Identities = 99/113 (87%), Positives = 107/113 (94%)
 Frame = +2

Query: 74  MAFCNKIGSLLRQSAAQSNQAPVSSMLNYIRCMSSSKLFVGGLSYGVDDQSLRDAFASFG 253
           MAFCNK+G+LLRQ A QS+ APVSSMLNY+R MSSSKLF+GGLSYGVDDQSL+DAFAS+G
Sbjct: 1   MAFCNKLGNLLRQGATQSSHAPVSSMLNYLRHMSSSKLFIGGLSYGVDDQSLKDAFASYG 60

Query: 254 EVVEARVITDRDTGRSRGFGFVNFTSDEQASCALSAMDGQDLNGRNIRVSYAN 412
           EVVEARVITDRDTGRSRGFGFVNFTSDE A+ ALSAMDGQDLNGRNIRVSYAN
Sbjct: 61  EVVEARVITDRDTGRSRGFGFVNFTSDESATSALSAMDGQDLNGRNIRVSYAN 113


>ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycine max]
           gi|255631812|gb|ACU16273.1| unknown [Glycine max]
          Length = 138

 Score =  192 bits (489), Expect = 5e-47
 Identities = 92/113 (81%), Positives = 108/113 (95%)
 Frame = +2

Query: 74  MAFCNKIGSLLRQSAAQSNQAPVSSMLNYIRCMSSSKLFVGGLSYGVDDQSLRDAFASFG 253
           MAFCNK+G++LRQ AA+S QAPVSSMLNYIRCMSSSKLF+GGLSYGVDDQSL+DAF+ FG
Sbjct: 1   MAFCNKVGNVLRQGAARSTQAPVSSMLNYIRCMSSSKLFIGGLSYGVDDQSLKDAFSGFG 60

Query: 254 EVVEARVITDRDTGRSRGFGFVNFTSDEQASCALSAMDGQDLNGRNIRVSYAN 412
           +VV+A+VITDRD+GRSRGFGFVNF++DE AS ALSAMDG+DL+GR+IRVSYAN
Sbjct: 61  DVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSAMDGKDLDGRSIRVSYAN 113


>ref|NP_001236758.1| uncharacterized protein LOC100499841 [Glycine max]
           gi|255627057|gb|ACU13873.1| unknown [Glycine max]
          Length = 143

 Score =  191 bits (486), Expect = 1e-46
 Identities = 91/113 (80%), Positives = 107/113 (94%)
 Frame = +2

Query: 74  MAFCNKIGSLLRQSAAQSNQAPVSSMLNYIRCMSSSKLFVGGLSYGVDDQSLRDAFASFG 253
           MAFCNK+G++LRQ AA+S  APV+SMLNYIRCMSSSKLF+GGLSYGVDDQSL+DAF+ FG
Sbjct: 1   MAFCNKVGNVLRQGAARSTHAPVASMLNYIRCMSSSKLFIGGLSYGVDDQSLKDAFSGFG 60

Query: 254 EVVEARVITDRDTGRSRGFGFVNFTSDEQASCALSAMDGQDLNGRNIRVSYAN 412
           +VV+A+VITDRD+GRSRGFGFVNF++DE AS ALSAMDG+DLNGR+IRVSYAN
Sbjct: 61  DVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSAMDGKDLNGRSIRVSYAN 113


>ref|XP_003601657.1| Glycine-rich RNA-binding protein [Medicago truncatula]
           gi|355490705|gb|AES71908.1| Glycine-rich RNA-binding
           protein [Medicago truncatula]
          Length = 146

 Score =  188 bits (477), Expect = 1e-45
 Identities = 95/113 (84%), Positives = 104/113 (92%)
 Frame = +2

Query: 74  MAFCNKIGSLLRQSAAQSNQAPVSSMLNYIRCMSSSKLFVGGLSYGVDDQSLRDAFASFG 253
           MAFCNKIG+LLRQ A QS QAPVSSMLNY+R MSSSKLF+GGLSY VDDQSLRDAF ++G
Sbjct: 1   MAFCNKIGNLLRQGATQSTQAPVSSMLNYLRHMSSSKLFIGGLSYNVDDQSLRDAFTTYG 60

Query: 254 EVVEARVITDRDTGRSRGFGFVNFTSDEQASCALSAMDGQDLNGRNIRVSYAN 412
           +VVEARVITDR+TGRSRGFGFVNFTS+E A+ ALS MDGQDLNGRNIRVSYAN
Sbjct: 61  DVVEARVITDRETGRSRGFGFVNFTSEESATSALS-MDGQDLNGRNIRVSYAN 112


>gb|AFK48773.1| unknown [Lotus japonicus]
          Length = 146

 Score =  187 bits (476), Expect = 2e-45
 Identities = 92/113 (81%), Positives = 104/113 (92%)
 Frame = +2

Query: 74  MAFCNKIGSLLRQSAAQSNQAPVSSMLNYIRCMSSSKLFVGGLSYGVDDQSLRDAFASFG 253
           MAF NK+G++LRQ+AAQ +QAPV+SMLNYIRCMSSSKLF+GGLSYGVDD+SL DAF+SFG
Sbjct: 1   MAFLNKVGNVLRQAAAQRSQAPVASMLNYIRCMSSSKLFIGGLSYGVDDKSLEDAFSSFG 60

Query: 254 EVVEARVITDRDTGRSRGFGFVNFTSDEQASCALSAMDGQDLNGRNIRVSYAN 412
            V EARVI DRDTGRSRGFGFV+F S+E AS ALS+MDGQDLNGRNIRVSYAN
Sbjct: 61  TVAEARVIVDRDTGRSRGFGFVSFDSEESASSALSSMDGQDLNGRNIRVSYAN 113


Top