BLASTX nr result

ID: Glycyrrhiza24_contig00005502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005502
         (812 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236730.1| uncharacterized protein LOC100500095 [Glycin...   375   e-102
ref|NP_001241417.1| uncharacterized protein LOC100803031 [Glycin...   373   e-101
ref|XP_003552010.1| PREDICTED: mediator of RNA polymerase II tra...   369   e-100
gb|AFK42853.1| unknown [Medicago truncatula]                          366   3e-99
ref|XP_002532875.1| conserved hypothetical protein [Ricinus comm...   362   7e-98

>ref|NP_001236730.1| uncharacterized protein LOC100500095 [Glycine max]
           gi|255629097|gb|ACU14893.1| unknown [Glycine max]
          Length = 217

 Score =  375 bits (964), Expect = e-102
 Identities = 189/200 (94%), Positives = 195/200 (97%)
 Frame = +3

Query: 192 MECVVQGIIETQHVEALEILLQGLCGVQRERLRIHEICLKNGPNLGTVASEVRLLCDLEQ 371
           MECVVQGIIETQHVEALEILLQGLCGVQRERLRIHEICLK+GP+LGTVASEVRLLCDLEQ
Sbjct: 1   MECVVQGIIETQHVEALEILLQGLCGVQRERLRIHEICLKSGPHLGTVASEVRLLCDLEQ 60

Query: 372 PEPSWTVRHVGGAMRGAGAEQISVLVRTMVESKASKNVLRMFYTLGYKLDHELLRVGFSF 551
            EPSWTV+HVGGAMRGAGAEQISVLVR+MVESK SKN LRMFYTLGYKLDHELLRVGFSF
Sbjct: 61  AEPSWTVKHVGGAMRGAGAEQISVLVRSMVESKTSKNALRMFYTLGYKLDHELLRVGFSF 120

Query: 552 QFYRGAQITVTVSSINKMLKLHATDEAVPVTPGIQMVEVTAPASAETYTEVASAVSSFCE 731
            F+RGAQITVTVSSINKMLKLHATDEAVPVTPGIQMVEVTAPA+AETY EVASAVSSFCE
Sbjct: 121 NFHRGAQITVTVSSINKMLKLHATDEAVPVTPGIQMVEVTAPATAETYAEVASAVSSFCE 180

Query: 732 YLAPLLHLSKPGISTGVVPT 791
           YLAPLLHLSKPGISTGVVPT
Sbjct: 181 YLAPLLHLSKPGISTGVVPT 200


>ref|NP_001241417.1| uncharacterized protein LOC100803031 [Glycine max]
           gi|255638120|gb|ACU19374.1| unknown [Glycine max]
          Length = 217

 Score =  373 bits (958), Expect = e-101
 Identities = 188/200 (94%), Positives = 195/200 (97%)
 Frame = +3

Query: 192 MECVVQGIIETQHVEALEILLQGLCGVQRERLRIHEICLKNGPNLGTVASEVRLLCDLEQ 371
           MECVVQGIIETQHVEALEILLQGLCGVQRERLRIHEICLK+G +LGTVASEVRLLCDLEQ
Sbjct: 1   MECVVQGIIETQHVEALEILLQGLCGVQRERLRIHEICLKSGQHLGTVASEVRLLCDLEQ 60

Query: 372 PEPSWTVRHVGGAMRGAGAEQISVLVRTMVESKASKNVLRMFYTLGYKLDHELLRVGFSF 551
            EPSWTV+HVGGAMRGAGAEQISVLVR+MVESK SKN LRMFYTLGYKLDHELLRVGFSF
Sbjct: 61  AEPSWTVKHVGGAMRGAGAEQISVLVRSMVESKTSKNALRMFYTLGYKLDHELLRVGFSF 120

Query: 552 QFYRGAQITVTVSSINKMLKLHATDEAVPVTPGIQMVEVTAPASAETYTEVASAVSSFCE 731
            F+RGAQITVTVSSINKMLKLHATDEAVPVTPGIQMVEVTAPA+AETYTEVA+AVSSFCE
Sbjct: 121 NFHRGAQITVTVSSINKMLKLHATDEAVPVTPGIQMVEVTAPATAETYTEVAAAVSSFCE 180

Query: 732 YLAPLLHLSKPGISTGVVPT 791
           YLAPLLHLSKPGISTGVVPT
Sbjct: 181 YLAPLLHLSKPGISTGVVPT 200


>ref|XP_003552010.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           18-like [Glycine max]
          Length = 214

 Score =  369 bits (947), Expect = e-100
 Identities = 186/199 (93%), Positives = 192/199 (96%)
 Frame = +3

Query: 192 MECVVQGIIETQHVEALEILLQGLCGVQRERLRIHEICLKNGPNLGTVASEVRLLCDLEQ 371
           MECVVQGIIETQHVEALEILLQGLCGVQRERLRIHEICLK+GP+LGTVASEVRLLCDLEQ
Sbjct: 1   MECVVQGIIETQHVEALEILLQGLCGVQRERLRIHEICLKSGPHLGTVASEVRLLCDLEQ 60

Query: 372 PEPSWTVRHVGGAMRGAGAEQISVLVRTMVESKASKNVLRMFYTLGYKLDHELLRVGFSF 551
            EPSWTV H GGAMRGAGAEQISVLVR+MVESK SKN LRMFYTLGYKLDHELLRVGFSF
Sbjct: 61  AEPSWTVIHAGGAMRGAGAEQISVLVRSMVESKTSKNALRMFYTLGYKLDHELLRVGFSF 120

Query: 552 QFYRGAQITVTVSSINKMLKLHATDEAVPVTPGIQMVEVTAPASAETYTEVASAVSSFCE 731
            F+RGAQITVTVSSINKMLKLHATDEA+PVTPGIQMVEVTAPA+AETY EVASAVSSFCE
Sbjct: 121 NFHRGAQITVTVSSINKMLKLHATDEAMPVTPGIQMVEVTAPATAETYAEVASAVSSFCE 180

Query: 732 YLAPLLHLSKPGISTGVVP 788
           YLAPLLHLSKPGISTGVVP
Sbjct: 181 YLAPLLHLSKPGISTGVVP 199


>gb|AFK42853.1| unknown [Medicago truncatula]
          Length = 217

 Score =  366 bits (940), Expect = 3e-99
 Identities = 183/200 (91%), Positives = 191/200 (95%)
 Frame = +3

Query: 192 MECVVQGIIETQHVEALEILLQGLCGVQRERLRIHEICLKNGPNLGTVASEVRLLCDLEQ 371
           MECVVQGIIETQHVEALEILLQGLCGVQRERLRIHE+CLKNGP+LG V+SEVRLLCDLEQ
Sbjct: 1   MECVVQGIIETQHVEALEILLQGLCGVQRERLRIHELCLKNGPHLGPVSSEVRLLCDLEQ 60

Query: 372 PEPSWTVRHVGGAMRGAGAEQISVLVRTMVESKASKNVLRMFYTLGYKLDHELLRVGFSF 551
            EPSWTVRHVGGAMRGAGA+QISVLVRTMVESK SKNVLRMFYTLGYKLDHELLRVGFSF
Sbjct: 61  TEPSWTVRHVGGAMRGAGADQISVLVRTMVESKVSKNVLRMFYTLGYKLDHELLRVGFSF 120

Query: 552 QFYRGAQITVTVSSINKMLKLHATDEAVPVTPGIQMVEVTAPASAETYTEVASAVSSFCE 731
           +F RGAQITV VSS+NKMLKLHATDEAVPVTPGIQMVEVTAPAS E Y EVA+AV SFCE
Sbjct: 121 KFNRGAQITVRVSSVNKMLKLHATDEAVPVTPGIQMVEVTAPASDENYAEVAAAVQSFCE 180

Query: 732 YLAPLLHLSKPGISTGVVPT 791
           YLAPLLHLSKPG+STGVVPT
Sbjct: 181 YLAPLLHLSKPGVSTGVVPT 200


>ref|XP_002532875.1| conserved hypothetical protein [Ricinus communis]
           gi|223527360|gb|EEF29504.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 217

 Score =  362 bits (928), Expect = 7e-98
 Identities = 178/200 (89%), Positives = 191/200 (95%)
 Frame = +3

Query: 192 MECVVQGIIETQHVEALEILLQGLCGVQRERLRIHEICLKNGPNLGTVASEVRLLCDLEQ 371
           MECVVQGIIETQHVEALEILLQGLCGV RERLRIHE+CLK+GPNLG VASEVRLLCDLEQ
Sbjct: 1   MECVVQGIIETQHVEALEILLQGLCGVHRERLRIHELCLKSGPNLGIVASEVRLLCDLEQ 60

Query: 372 PEPSWTVRHVGGAMRGAGAEQISVLVRTMVESKASKNVLRMFYTLGYKLDHELLRVGFSF 551
           PEP+WTV+HVGGAMRGAGAEQISVLVRTMVESKASKNVLR+FY LGYKLDHELLRVGF+F
Sbjct: 61  PEPTWTVKHVGGAMRGAGAEQISVLVRTMVESKASKNVLRLFYALGYKLDHELLRVGFAF 120

Query: 552 QFYRGAQITVTVSSINKMLKLHATDEAVPVTPGIQMVEVTAPASAETYTEVASAVSSFCE 731
            F RGA+ITV VSS+NKMLKLHATDEAVPVTPGIQ+VEVTAPA+ E Y+EV +AVSSFCE
Sbjct: 121 HFQRGARITVRVSSVNKMLKLHATDEAVPVTPGIQLVEVTAPATPENYSEVVAAVSSFCE 180

Query: 732 YLAPLLHLSKPGISTGVVPT 791
           YLAPLLHLSKPG+STGVVPT
Sbjct: 181 YLAPLLHLSKPGVSTGVVPT 200


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