BLASTX nr result

ID: Glycyrrhiza24_contig00005491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005491
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551797.1| PREDICTED: translation initiation factor eIF...   112   3e-23
ref|XP_003554977.1| PREDICTED: translation initiation factor eIF...    98   8e-19
ref|XP_003543906.1| PREDICTED: translation initiation factor eIF...    95   7e-18
ref|XP_002283177.1| PREDICTED: translation initiation factor eIF...    84   2e-14
emb|CAN69725.1| hypothetical protein VITISV_009152 [Vitis vinifera]    84   2e-14

>ref|XP_003551797.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
           [Glycine max]
          Length = 627

 Score =  112 bits (280), Expect = 3e-23
 Identities = 56/74 (75%), Positives = 62/74 (83%)
 Frame = -3

Query: 286 ARRAPRAVIDPKVRKVGFFAPPDRSQSGPTDPNAFDISPSANSLSPVMIPPPRHSSENLH 107
           ARRAPRAVIDPKVR+VGFFAPP+       DP +F++SPSANSLSPVMIPPPRHSSENL 
Sbjct: 3   ARRAPRAVIDPKVRRVGFFAPPE------PDPISFEVSPSANSLSPVMIPPPRHSSENLG 56

Query: 106 LHARTAVTSPSAEE 65
           LH R A TSPSA+E
Sbjct: 57  LHTRLAATSPSAQE 70


>ref|XP_003554977.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
           [Glycine max]
          Length = 660

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 57/101 (56%), Positives = 66/101 (65%), Gaps = 3/101 (2%)
 Frame = -3

Query: 295 MDAARRAPRAVIDP--KVRKVGFFAPPDRSQSGPTDPNAFDISPSANSLSPVMIPPPRHS 122
           MD +RRAPRAVIDP  K+R+VGFFAPP+RSQSGP DP      P ++SLSPVMIPPPRH 
Sbjct: 1   MDPSRRAPRAVIDPIPKIRQVGFFAPPERSQSGPPDP-THSSPPISSSLSPVMIPPPRHL 59

Query: 121 SENLHLHARTAVTSP-SAEEXXXXXXXXXXXXXXXFPAPMS 2
           S+NL LHA    +SP SA                 FPAP+S
Sbjct: 60  SDNLLLHAPRPASSPLSAAAAAGGSGNSFDYGAVFFPAPLS 100


>ref|XP_003543906.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
           [Glycine max]
          Length = 659

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 56/102 (54%), Positives = 63/102 (61%), Gaps = 4/102 (3%)
 Frame = -3

Query: 295 MDAARRAPRAVIDP--KVRKVGFFAPPDRSQSGPTDPNAFDISPSANSLSPVMIPPPRHS 122
           MD +RRAPRAVIDP  K+R+VGFFAPP+ SQSGP DP      P +NSLSPVMIPPPRH 
Sbjct: 1   MDPSRRAPRAVIDPVPKIRQVGFFAPPESSQSGPLDPT-HSSPPISNSLSPVMIPPPRHL 59

Query: 121 SENLHLHARTAVTSP--SAEEXXXXXXXXXXXXXXXFPAPMS 2
           S+NL LH      SP  SA                 FPAP+S
Sbjct: 60  SDNLLLHDPRPAASPLSSASAVAAAGSGNSFDSADFFPAPLS 101


>ref|XP_002283177.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
           [Vitis vinifera]
          Length = 650

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 47/75 (62%), Positives = 54/75 (72%), Gaps = 6/75 (8%)
 Frame = -3

Query: 283 RRAPRAVIDPKVRKVGFFAP---PDRSQSGPTD---PNAFDISPSANSLSPVMIPPPRHS 122
           RR  R VIDPKVR+VGFFAP   P R+QSGP +   P   D SP+ NSLSPVMIPPPRH+
Sbjct: 4   RRGARVVIDPKVRQVGFFAPGASPGRTQSGPPESSSPPVADNSPTGNSLSPVMIPPPRHA 63

Query: 121 SENLHLHARTAVTSP 77
           S+NL L AR A+  P
Sbjct: 64  SDNL-LSARPALYPP 77


>emb|CAN69725.1| hypothetical protein VITISV_009152 [Vitis vinifera]
          Length = 841

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 47/75 (62%), Positives = 54/75 (72%), Gaps = 6/75 (8%)
 Frame = -3

Query: 283 RRAPRAVIDPKVRKVGFFAP---PDRSQSGPTD---PNAFDISPSANSLSPVMIPPPRHS 122
           RR  R VIDPKVR+VGFFAP   P R+QSGP +   P   D SP+ NSLSPVMIPPPRH+
Sbjct: 69  RRGARVVIDPKVRQVGFFAPGASPGRTQSGPPESSSPPVADNSPTGNSLSPVMIPPPRHA 128

Query: 121 SENLHLHARTAVTSP 77
           S+NL L AR A+  P
Sbjct: 129 SDNL-LSARPALYPP 142


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