BLASTX nr result

ID: Glycyrrhiza24_contig00005483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005483
         (884 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590633.1| Ethylene receptor [Medicago truncatula] gi|3...   197   2e-48
ref|XP_002307592.1| predicted protein [Populus trichocarpa] gi|2...   127   3e-27
ref|XP_002520717.1| conserved hypothetical protein [Ricinus comm...   125   1e-26
ref|XP_002278578.1| PREDICTED: uncharacterized protein LOC100261...   116   6e-24
emb|CAN67178.1| hypothetical protein VITISV_037456 [Vitis vinifera]   115   1e-23

>ref|XP_003590633.1| Ethylene receptor [Medicago truncatula] gi|355479681|gb|AES60884.1|
           Ethylene receptor [Medicago truncatula]
          Length = 237

 Score =  197 bits (502), Expect = 2e-48
 Identities = 113/182 (62%), Positives = 123/182 (67%), Gaps = 2/182 (1%)
 Frame = -3

Query: 702 MIKNFNSLYDPTLTFDQSFYXXXXXXXXXXXXXXSFESEPEPKPXXXXXXXXXXXXXFSC 523
           MIKNFNSLYDP+LT D +                  E EPEP+P             FS 
Sbjct: 59  MIKNFNSLYDPSLTSDHTLCSSSLSTTFTTSTSFDLEIEPEPEPADFAAAFASQRFFFSS 118

Query: 522 PGSSNSLID-TDVSTQQYSS-SLMDKSINDVGTDXXXXXXXXXXGVLFNGSVAVPTYSPD 349
           PGSSNSLI+ T+    Q+SS  LMDKS +   T            VLFNGSVAVPTYSPD
Sbjct: 119 PGSSNSLIEYTNTDCIQHSSVPLMDKSNS---TKREKKQEKEKEEVLFNGSVAVPTYSPD 175

Query: 348 PYVDFRRSMQEMVEARPELMDVKSNWNILHELLLCYLALNPKSTHKFILGAFADLLVNLM 169
           PY+DFRRSMQEMVEARPELMDVKSNWNILHELLLCYLALNPK+THKFILGAFADLLV LM
Sbjct: 176 PYMDFRRSMQEMVEARPELMDVKSNWNILHELLLCYLALNPKNTHKFILGAFADLLVTLM 235

Query: 168 SY 163
           S+
Sbjct: 236 SF 237


>ref|XP_002307592.1| predicted protein [Populus trichocarpa] gi|222857041|gb|EEE94588.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  127 bits (319), Expect = 3e-27
 Identities = 87/196 (44%), Positives = 105/196 (53%), Gaps = 17/196 (8%)
 Frame = -3

Query: 702 MIKNFNSLYDPTLTFDQSFYXXXXXXXXXXXXXXSFESEPEPKPXXXXXXXXXXXXXFSC 523
           +IKN+NSLYDPT+    S                S  SEP+                FS 
Sbjct: 41  LIKNYNSLYDPTIDSASS----------STSSSSSSSSEPD-----FATVCASQRFFFSS 85

Query: 522 PGSSNSLIDTD-------------VSTQQYSSSLMDKSINDVGTDXXXXXXXXXXGVL-- 388
           PG SNS+I++              V+ Q  S+ L     ND               +L  
Sbjct: 86  PGRSNSIIESTPSIVTSSDSSDNLVAPQSDSNGLTTNPSNDKSLLVDSCNNSTHPQLLKS 145

Query: 387 --FNGSVAVPTYSPDPYVDFRRSMQEMVEARPELMDVKSNWNILHELLLCYLALNPKSTH 214
                SVAVPTYSPDPY+DFRRSMQEMVEAR +L+DV +NW  LHELL CYL LNPKS+H
Sbjct: 146 PTVKDSVAVPTYSPDPYMDFRRSMQEMVEAR-DLVDVNANWEYLHELLSCYLDLNPKSSH 204

Query: 213 KFILGAFADLLVNLMS 166
           KFI+GAFADLLV+L+S
Sbjct: 205 KFIVGAFADLLVSLLS 220


>ref|XP_002520717.1| conserved hypothetical protein [Ricinus communis]
           gi|223540102|gb|EEF41679.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 211

 Score =  125 bits (315), Expect = 1e-26
 Identities = 74/137 (54%), Positives = 89/137 (64%), Gaps = 13/137 (9%)
 Frame = -3

Query: 528 SCPGSSNSLIDTD---VSTQQYSSSLMDKSIN--------DVGTDXXXXXXXXXXGV--L 388
           S PG SNS+I++    V+  + S+SL+    N        D  T                
Sbjct: 68  SSPGHSNSIIESTPSIVTPTESSNSLVSLKCNATAATPLSDSSTTNQSNRSSLESLTPPT 127

Query: 387 FNGSVAVPTYSPDPYVDFRRSMQEMVEARPELMDVKSNWNILHELLLCYLALNPKSTHKF 208
              SVAVPTYSPDPY+DFRRSMQEMVEAR + +DVK NW+ LHELLLCYLALNPKSTHKF
Sbjct: 128 IKDSVAVPTYSPDPYLDFRRSMQEMVEAR-DFVDVKENWDYLHELLLCYLALNPKSTHKF 186

Query: 207 ILGAFADLLVNLMSYPS 157
           I+ AFADLLV+L++ PS
Sbjct: 187 IVRAFADLLVSLLASPS 203


>ref|XP_002278578.1| PREDICTED: uncharacterized protein LOC100261343 [Vitis vinifera]
          Length = 223

 Score =  116 bits (291), Expect = 6e-24
 Identities = 78/179 (43%), Positives = 91/179 (50%)
 Frame = -3

Query: 702 MIKNFNSLYDPTLTFDQSFYXXXXXXXXXXXXXXSFESEPEPKPXXXXXXXXXXXXXFSC 523
           +IKNFNSLYD  LT D +                  +S     P             FS 
Sbjct: 52  LIKNFNSLYD--LTSDSTSKSLTRTTDDFLSTSE--DSVDSESPPDFATVFASQRFFFSS 107

Query: 522 PGSSNSLIDTDVSTQQYSSSLMDKSINDVGTDXXXXXXXXXXGVLFNGSVAVPTYSPDPY 343
           PG SNS+ +   S  +  S                         + NG VAV TYSP+PY
Sbjct: 108 PGRSNSIFEASESPPESDS-------------------------IVNGGVAVHTYSPNPY 142

Query: 342 VDFRRSMQEMVEARPELMDVKSNWNILHELLLCYLALNPKSTHKFILGAFADLLVNLMS 166
            DFRRSMQEM EAR EL DV ++W+ LHELLLCYL LNPK THKFI+ AFADL+V LMS
Sbjct: 143 EDFRRSMQEMAEAR-ELRDVAADWDYLHELLLCYLTLNPKHTHKFIIRAFADLIVCLMS 200


>emb|CAN67178.1| hypothetical protein VITISV_037456 [Vitis vinifera]
          Length = 428

 Score =  115 bits (288), Expect = 1e-23
 Identities = 77/179 (43%), Positives = 91/179 (50%)
 Frame = -3

Query: 702 MIKNFNSLYDPTLTFDQSFYXXXXXXXXXXXXXXSFESEPEPKPXXXXXXXXXXXXXFSC 523
           +IKNFNSLYD  LT D +                  +S     P             FS 
Sbjct: 52  LIKNFNSLYD--LTSDSTSKSLTRTTDDFLSTSE--DSVDSESPPDFATVFASQRFFFSS 107

Query: 522 PGSSNSLIDTDVSTQQYSSSLMDKSINDVGTDXXXXXXXXXXGVLFNGSVAVPTYSPDPY 343
           PG SNS+ +   S  +  +                         + NG VAV TYSP+PY
Sbjct: 108 PGRSNSIFEASESPPESDA-------------------------IVNGGVAVHTYSPNPY 142

Query: 342 VDFRRSMQEMVEARPELMDVKSNWNILHELLLCYLALNPKSTHKFILGAFADLLVNLMS 166
            DFRRSMQEM EAR EL DV ++W+ LHELLLCYL LNPK THKFI+ AFADL+V LMS
Sbjct: 143 EDFRRSMQEMAEAR-ELRDVAADWDYLHELLLCYLTLNPKHTHKFIIRAFADLIVCLMS 200


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