BLASTX nr result

ID: Glycyrrhiza24_contig00005368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005368
         (1667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517458.1| PREDICTED: E3 ubiquitin-protein ligase At1g1...   541   e-151
ref|XP_003611137.1| E3 ubiquitin-protein ligase [Medicago trunca...   535   e-149
ref|XP_003538385.1| PREDICTED: E3 ubiquitin-protein ligase At1g1...   533   e-149
ref|XP_004147971.1| PREDICTED: E3 ubiquitin-protein ligase At1g1...   489   e-136
ref|XP_003525718.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   485   e-134

>ref|XP_003517458.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Glycine max]
          Length = 385

 Score =  541 bits (1395), Expect = e-151
 Identities = 274/388 (70%), Positives = 287/388 (73%)
 Frame = +3

Query: 267  MATTRSPSRSSEDIVDSTPLLANSGDSSEEINSGXXXXXXXXXXXXXXXXXXXSGRRMMR 446
            MATTRS   SSEDIVDSTPLLANSG SS+E+ SG                   SGRRMMR
Sbjct: 1    MATTRS---SSEDIVDSTPLLANSGGSSDELTSGRGFSRRQRLRQAARFLRRASGRRMMR 57

Query: 447  EPSXXXXXXXXXXXXXXXSDWAYSKPVVILDIVWNFAFVIVAATVLILSRSEAPSMPLRL 626
            EPS               SDWAYSKPVV+LDIVWNFAFV+VA  VL+LS SEAP MPLRL
Sbjct: 58   EPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNFAFVVVAGAVLVLSASEAPGMPLRL 117

Query: 627  WIAGYALQCILHMVCVCVEXXXXXXXXXSTASSNAVAGSDRVXXXXXXXXXXXXXXXXXX 806
            WI GYA+QC+LHMVCVCVE         + ASS                           
Sbjct: 118  WIVGYAMQCVLHMVCVCVEYRRRRRQQRAAASSVQDRVGSSSGNLSVSSREGSASGSAQY 177

Query: 807  XXLAQFDEEGTSVAKHLESANTVFSFIWWIIGFYWVSAGGQALAQDSPQLYWLCIIFLGX 986
              L Q D+EGTSVAKHLESANT+FSF+WWIIGFYWVSAGGQALAQDSPQLYWLCIIFLG 
Sbjct: 178  VSLGQLDDEGTSVAKHLESANTMFSFVWWIIGFYWVSAGGQALAQDSPQLYWLCIIFLGF 237

Query: 987  XXXXXXXXXALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFQRIESNEK 1166
                     ALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKF+RIESNEK
Sbjct: 238  DVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFRRIESNEK 297

Query: 1167 LNGNIQGPVGGIMTECQADSPIEHVLAEEDAECCICLSSYDDGVELRELPCGHHFHCACV 1346
            L G IQGPVGGIMTECQADSPIEHVLAEEDAECCICLSSYDDGVELRELPCGHHFHC CV
Sbjct: 298  LTGTIQGPVGGIMTECQADSPIEHVLAEEDAECCICLSSYDDGVELRELPCGHHFHCVCV 357

Query: 1347 DKWLYINATCPLCKYNILKSSNLGQEAV 1430
            DKWLYINATCPLCKYNILKS+ L QE V
Sbjct: 358  DKWLYINATCPLCKYNILKSNTLSQEEV 385


>ref|XP_003611137.1| E3 ubiquitin-protein ligase [Medicago truncatula]
            gi|355512472|gb|AES94095.1| E3 ubiquitin-protein ligase
            [Medicago truncatula] gi|388506770|gb|AFK41451.1| unknown
            [Medicago truncatula]
          Length = 387

 Score =  535 bits (1377), Expect = e-149
 Identities = 272/387 (70%), Positives = 291/387 (75%), Gaps = 4/387 (1%)
 Frame = +3

Query: 282  SPSRSSEDIVDSTPLLAN--SGDSSEEINSGXXXXXXXXXXXXXXXXXXXSGRRMMREPS 455
            +P+RSS DI+DSTP L N  +G SS+++N+                    SGRR MREPS
Sbjct: 3    TPNRSSSDIIDSTPFLTNPGNGSSSDDLNNSGRRRRQRLLQAARFLRQA-SGRRTMREPS 61

Query: 456  XXXXXXXXXXXXXXXSDWAYSKPVVILDIVWNFAFVIVAATVLILSRSEAPSMPLRLWIA 635
                           SDWAYSKPVVILDIVWNFAFVIVA T L LSR+EAP MPLRLWIA
Sbjct: 62   VVVREAAAEQLEERQSDWAYSKPVVILDIVWNFAFVIVAGTALFLSRNEAPEMPLRLWIA 121

Query: 636  GYALQCILHMVCVCVEXXXXXXXXXSTASSNAVAGSDRVXXXXXXXXXXXXXXXXXXXX- 812
            GY LQC+LHMVCVC E         S+ SSNAVAGSDR+                     
Sbjct: 122  GYVLQCVLHMVCVCFEYRRRRRFQRSS-SSNAVAGSDRIGSGNFSSREGSRSAVSGSSYV 180

Query: 813  -LAQFDEEGTSVAKHLESANTVFSFIWWIIGFYWVSAGGQALAQDSPQLYWLCIIFLGXX 989
             LAQFDEE TSVAKHLESANT+FSFIWWIIGFYWVSAGGQALAQDSPQLYWLCI+FLG  
Sbjct: 181  SLAQFDEESTSVAKHLESANTMFSFIWWIIGFYWVSAGGQALAQDSPQLYWLCIVFLGFD 240

Query: 990  XXXXXXXXALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFQRIESNEKL 1169
                    ALAC+IGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKF+++ESNEK 
Sbjct: 241  VFFVVFCVALACVIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFRKVESNEKQ 300

Query: 1170 NGNIQGPVGGIMTECQADSPIEHVLAEEDAECCICLSSYDDGVELRELPCGHHFHCACVD 1349
              N QGPVGGIMTEC+ADSPIEHVLAEEDAECCICLSSYDDGVELRELPCGHHFHCACVD
Sbjct: 301  TDNNQGPVGGIMTECRADSPIEHVLAEEDAECCICLSSYDDGVELRELPCGHHFHCACVD 360

Query: 1350 KWLYINATCPLCKYNILKSSNLGQEAV 1430
            KWLYINATCPLCKYNILKSSNLGQE V
Sbjct: 361  KWLYINATCPLCKYNILKSSNLGQEEV 387


>ref|XP_003538385.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Glycine max]
          Length = 387

 Score =  533 bits (1373), Expect = e-149
 Identities = 272/390 (69%), Positives = 286/390 (73%), Gaps = 2/390 (0%)
 Frame = +3

Query: 267  MATTRSPSRSSEDIVDSTPLLANSGDSSEEINSGXXXXXXXXXXXXXXXXXXXSGRRMMR 446
            MATTRS   SSEDIVDSTPLLANS  SS+++ SG                   SGRRMMR
Sbjct: 1    MATTRS---SSEDIVDSTPLLANSAGSSDDLTSGRRFARRQRLRQAAQFLRQASGRRMMR 57

Query: 447  EPSXXXXXXXXXXXXXXXSDWAYSKPVVILDIVWNFAFVIVAATVLILSRSEAPSMPLRL 626
            EPS               SDWAYSKPVV+LDIVWN AFV+VA TVL+LS SEAP MPLRL
Sbjct: 58   EPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVVVAGTVLVLSASEAPGMPLRL 117

Query: 627  WIAGYALQCILHMVCVCVEXXXXXXXXXSTASS--NAVAGSDRVXXXXXXXXXXXXXXXX 800
            WI GYA+QC+LHMV VCVE         + ASS  + V  S                   
Sbjct: 118  WIVGYAMQCVLHMVFVCVEYRRRRRQQPAAASSVQDRVGSSSGNLSVSSREGSASASASA 177

Query: 801  XXXXLAQFDEEGTSVAKHLESANTVFSFIWWIIGFYWVSAGGQALAQDSPQLYWLCIIFL 980
                L Q D+E TSVAKHLESANT+FSF+WWIIGFYWVSAGGQALAQDSPQLYWLCIIFL
Sbjct: 178  QNVLLGQLDDESTSVAKHLESANTMFSFVWWIIGFYWVSAGGQALAQDSPQLYWLCIIFL 237

Query: 981  GXXXXXXXXXXALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFQRIESN 1160
            G          ALACIIGIAVCCCLPCIIALLYAV DQEGASKEDIEQLSKFKF+RIESN
Sbjct: 238  GFDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVTDQEGASKEDIEQLSKFKFRRIESN 297

Query: 1161 EKLNGNIQGPVGGIMTECQADSPIEHVLAEEDAECCICLSSYDDGVELRELPCGHHFHCA 1340
            EKL G IQGPVGGIMTECQADSPIEH LAEEDAECCICLSSYDDGVELRELPCGHHFHC 
Sbjct: 298  EKLTGTIQGPVGGIMTECQADSPIEHALAEEDAECCICLSSYDDGVELRELPCGHHFHCV 357

Query: 1341 CVDKWLYINATCPLCKYNILKSSNLGQEAV 1430
            CVDKWLYINATCPLCKYNILKSSNL QE V
Sbjct: 358  CVDKWLYINATCPLCKYNILKSSNLSQEEV 387


>ref|XP_004147971.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Cucumis
            sativus]
          Length = 383

 Score =  489 bits (1259), Expect = e-136
 Identities = 243/388 (62%), Positives = 278/388 (71%)
 Frame = +3

Query: 267  MATTRSPSRSSEDIVDSTPLLANSGDSSEEINSGXXXXXXXXXXXXXXXXXXXSGRRMMR 446
            MA++RSP+ SS+DI+D++PL+     S ++ +SG                   S RR MR
Sbjct: 1    MASSRSPNGSSDDILDTSPLMGTPNRSLDDTHSGRRFVQRQSLRQAARFLRQASNRRTMR 60

Query: 447  EPSXXXXXXXXXXXXXXXSDWAYSKPVVILDIVWNFAFVIVAATVLILSRSEAPSMPLRL 626
            EPS               SDWAYSKPVVILDIVWNFAFV+VAAT+L+LSR+E+PSMPLRL
Sbjct: 61   EPSMLVRETAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAATILVLSRNESPSMPLRL 120

Query: 627  WIAGYALQCILHMVCVCVEXXXXXXXXXSTASSNAVAGSDRVXXXXXXXXXXXXXXXXXX 806
            WI GYA QCILHMVCVCVE         S  SS     S R                   
Sbjct: 121  WIVGYAFQCILHMVCVCVEYRRRRQLRYSAFSSMEEGNSAR-----SISGLGSRANSSHY 175

Query: 807  XXLAQFDEEGTSVAKHLESANTVFSFIWWIIGFYWVSAGGQALAQDSPQLYWLCIIFLGX 986
              LAQ DE  +SVAKHLESANT+FSFIWWIIGFYWVSAGGQ+LAQ SP LYWLCIIFLG 
Sbjct: 176  VSLAQLDENDSSVAKHLESANTMFSFIWWIIGFYWVSAGGQSLAQASPLLYWLCIIFLGF 235

Query: 987  XXXXXXXXXALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFQRIESNEK 1166
                     ALACIIGIAVCCCLPCIIALLYAVADQEGA+KED+EQLSKFKF+++E+ EK
Sbjct: 236  DVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGATKEDVEQLSKFKFRKVENTEK 295

Query: 1167 LNGNIQGPVGGIMTECQADSPIEHVLAEEDAECCICLSSYDDGVELRELPCGHHFHCACV 1346
             + ++Q P+GG+M+EC  DSPIE  L +EDAECCICLS+Y+DGVELRELPCGHHFHCACV
Sbjct: 296  FSTDVQEPLGGVMSECCTDSPIERPLLQEDAECCICLSAYEDGVELRELPCGHHFHCACV 355

Query: 1347 DKWLYINATCPLCKYNILKSSNLGQEAV 1430
            DKWLYINATCPLCKYNILK+SNL QE V
Sbjct: 356  DKWLYINATCPLCKYNILKNSNLAQEEV 383


>ref|XP_003525718.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
          Length = 380

 Score =  485 bits (1248), Expect = e-134
 Identities = 244/387 (63%), Positives = 275/387 (71%), Gaps = 1/387 (0%)
 Frame = +3

Query: 273  TTRSPSRSSEDIVDSTPLLANSGDSSEEINSGXXXXXXXXXXXXXXXXXXXSGRRMMREP 452
            TTRSP+RSSED  D TP L   G SS+E  SG                   SGRR+MREP
Sbjct: 4    TTRSPNRSSEDAADPTPFL---GTSSDESTSGRRLLRRPSLREAARFLRQASGRRLMREP 60

Query: 453  SXXXXXXXXXXXXXXXSDWAYSKPVVILDIVWNFAFVIVAATVLILSRSEAPSMPLRLWI 632
            S               SDWAYSKPVV+LDI+WNFAFV  AATV ILSR+E P+MPLRLWI
Sbjct: 61   SMVVREAAAEQLEERQSDWAYSKPVVVLDILWNFAFVAAAATVFILSRNENPNMPLRLWI 120

Query: 633  AGYALQCILHMVCVCVEXXXXXXXXX-STASSNAVAGSDRVXXXXXXXXXXXXXXXXXXX 809
             GYALQC+LH+ CVCVE          S A++ A  GS  +                   
Sbjct: 121  VGYALQCVLHVACVCVEYQRRLRRREQSNAAAIAGGGSGDLGPPSMDGSGHYVS------ 174

Query: 810  XLAQFDEEGTSVAKHLESANTVFSFIWWIIGFYWVSAGGQALAQDSPQLYWLCIIFLGXX 989
             LAQFD++G S+AKHLESANT+FSFIWW++GFYWVSA  ++L +DSP LYWLCI FLG  
Sbjct: 175  -LAQFDDDGISMAKHLESANTMFSFIWWVVGFYWVSADSESLVRDSPLLYWLCIAFLGFD 233

Query: 990  XXXXXXXXALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFQRIESNEKL 1169
                    ALACI+GIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFQR E+NEKL
Sbjct: 234  VFFVVFCMALACIVGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFQRTETNEKL 293

Query: 1170 NGNIQGPVGGIMTECQADSPIEHVLAEEDAECCICLSSYDDGVELRELPCGHHFHCACVD 1349
             GN QG  GGIM EC ADSPIEHVL++EDAECCICLS+YDDGVELR+LPCGHHFHCACVD
Sbjct: 294  AGNTQGAAGGIMIECDADSPIEHVLSDEDAECCICLSAYDDGVELRQLPCGHHFHCACVD 353

Query: 1350 KWLYINATCPLCKYNILKSSNLGQEAV 1430
            KWL+INATCPLCKYNILKS++  Q+ V
Sbjct: 354  KWLHINATCPLCKYNILKSTSHAQDEV 380


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